EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000028731 (Gene tree)
Gene ID: -
Gene Symbol: PUS1
Alias: -
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 12347 bases
Position: chrscaffold_113:2500366-2512712
Accession: 15508
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000029139	PseudoU_synth_1	PF01416.20	4.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000032709	PUS1-201	1113	-	ENSLAFP00000029139	370 (aa)	-	G3UMT0

Gene Model

Click here to download ENSLAFG00000028731's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000028731's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000028731	PUS1	100	81.402	ENSG00000177192	PUS1	93	81.402	Homo_sapiens
ENSLAFG00000028731	PUS1	99	66.304	ENSAPOG00000007254	pus1	87	66.304	Acanthochromis_polyacanthus
ENSLAFG00000028731	PUS1	98	79.945	ENSAMEG00000013715	PUS1	89	79.945	Ailuropoda_melanoleuca
ENSLAFG00000028731	PUS1	95	68.169	ENSACIG00000009169	pus1	86	68.169	Amphilophus_citrinellus
ENSLAFG00000028731	PUS1	94	69.231	ENSAOCG00000022207	pus1	83	69.231	Amphiprion_ocellaris
ENSLAFG00000028731	PUS1	94	69.231	ENSAPEG00000006039	pus1	90	69.231	Amphiprion_percula
ENSLAFG00000028731	PUS1	92	69.253	ENSATEG00000020688	pus1	88	70.115	Anabas_testudineus
ENSLAFG00000028731	PUS1	93	72.832	ENSACAG00000007367	PUS1	93	72.832	Anolis_carolinensis
ENSLAFG00000028731	PUS1	88	82.875	ENSANAG00000036192	PUS1	100	82.875	Aotus_nancymaae
ENSLAFG00000028731	PUS1	95	67.797	ENSACLG00000020868	pus1	91	67.797	Astatotilapia_calliptera
ENSLAFG00000028731	PUS1	92	69.767	ENSAMXG00000008710	pus1	80	69.767	Astyanax_mexicanus
ENSLAFG00000028731	PUS1	100	81.132	ENSBTAG00000012990	PUS1	93	81.132	Bos_taurus
ENSLAFG00000028731	PUS1	89	38.663	WBGene00004248	pus-1	81	38.663	Caenorhabditis_elegans
ENSLAFG00000028731	PUS1	68	84.646	ENSCJAG00000003720	PUS1	71	84.291	Callithrix_jacchus
ENSLAFG00000028731	PUS1	99	78.284	ENSCAFG00000006429	PUS1	91	79.339	Canis_familiaris
ENSLAFG00000028731	PUS1	97	79.339	ENSCAFG00020010737	PUS1	84	79.339	Canis_lupus_dingo
ENSLAFG00000028731	PUS1	100	81.402	ENSCHIG00000000487	PUS1	93	81.402	Capra_hircus
ENSLAFG00000028731	PUS1	99	82.973	ENSTSYG00000032605	PUS1	100	82.973	Carlito_syrichta
ENSLAFG00000028731	PUS1	80	82.215	ENSCAPG00000006421	PUS1	100	78.593	Cavia_aperea
ENSLAFG00000028731	PUS1	100	76.267	ENSCPOG00000001027	PUS1	88	76.533	Cavia_porcellus
ENSLAFG00000028731	PUS1	100	81.402	ENSCCAG00000015879	PUS1	91	82.067	Cebus_capucinus
ENSLAFG00000028731	PUS1	100	82.749	ENSCATG00000032870	PUS1	90	83.891	Cercocebus_atys
ENSLAFG00000028731	PUS1	100	76.533	ENSCLAG00000011689	PUS1	88	77.067	Chinchilla_lanigera
ENSLAFG00000028731	PUS1	100	83.288	ENSCSAG00000001879	PUS1	87	83.288	Chlorocebus_sabaeus
ENSLAFG00000028731	PUS1	85	74.522	ENSCPBG00000024715	PUS1	93	71.988	Chrysemys_picta_bellii
ENSLAFG00000028731	PUS1	87	43.789	ENSCING00000009426	-	86	43.789	Ciona_intestinalis
ENSLAFG00000028731	PUS1	87	43.385	ENSCSAVG00000003751	-	66	43.385	Ciona_savignyi
ENSLAFG00000028731	PUS1	100	73.585	ENSCANG00000035561	PUS1	90	75.602	Colobus_angolensis_palliatus
ENSLAFG00000028731	PUS1	100	80.323	ENSCGRG00001019592	Pus1	87	80.323	Cricetulus_griseus_chok1gshd
ENSLAFG00000028731	PUS1	100	80.323	ENSCGRG00000004048	Pus1	94	80.323	Cricetulus_griseus_crigri
ENSLAFG00000028731	PUS1	96	66.111	ENSCSEG00000003629	pus1	86	66.111	Cynoglossus_semilaevis
ENSLAFG00000028731	PUS1	94	69.231	ENSCVAG00000001265	pus1	85	69.231	Cyprinodon_variegatus
ENSLAFG00000028731	PUS1	70	30.405	ENSCVAG00000022150	pus3	58	30.405	Cyprinodon_variegatus
ENSLAFG00000028731	PUS1	94	66.954	ENSDARG00000045562	pus1	96	66.914	Danio_rerio
ENSLAFG00000028731	PUS1	77	30.395	ENSDARG00000028976	pus3	66	30.395	Danio_rerio
ENSLAFG00000028731	PUS1	94	78.917	ENSDNOG00000045576	PUS1	98	79.567	Dasypus_novemcinctus
ENSLAFG00000028731	PUS1	88	80.734	ENSDORG00000011455	Pus1	100	80.734	Dipodomys_ordii
ENSLAFG00000028731	PUS1	94	44.759	FBgn0038811	PUS1	78	47.222	Drosophila_melanogaster
ENSLAFG00000028731	PUS1	92	89.504	ENSETEG00000019160	PUS1	87	87.921	Echinops_telfairi
ENSLAFG00000028731	PUS1	86	45.640	ENSEBUG00000000368	-	63	45.640	Eptatretus_burgeri
ENSLAFG00000028731	PUS1	100	80.965	ENSEASG00005016535	PUS1	85	80.965	Equus_asinus_asinus
ENSLAFG00000028731	PUS1	100	80.965	ENSECAG00000006965	PUS1	92	80.965	Equus_caballus
ENSLAFG00000028731	PUS1	91	71.091	ENSELUG00000010424	pus1	86	71.091	Esox_lucius
ENSLAFG00000028731	PUS1	98	80.495	ENSFCAG00000010780	PUS1	86	80.495	Felis_catus
ENSLAFG00000028731	PUS1	99	72.800	ENSFALG00000008273	PUS1	88	72.800	Ficedula_albicollis
ENSLAFG00000028731	PUS1	100	78.284	ENSFDAG00000012518	PUS1	90	78.284	Fukomys_damarensis
ENSLAFG00000028731	PUS1	94	69.034	ENSFHEG00000010504	pus1	85	69.034	Fundulus_heteroclitus
ENSLAFG00000028731	PUS1	92	69.275	ENSGMOG00000008143	pus1	89	69.275	Gadus_morhua
ENSLAFG00000028731	PUS1	99	71.658	ENSGALG00000002354	PUS1	91	71.658	Gallus_gallus
ENSLAFG00000028731	PUS1	94	67.898	ENSGAFG00000006578	pus1	84	67.898	Gambusia_affinis
ENSLAFG00000028731	PUS1	95	67.598	ENSGACG00000017566	pus1	91	67.598	Gasterosteus_aculeatus
ENSLAFG00000028731	PUS1	89	70.482	ENSGAGG00000016730	-	94	71.687	Gopherus_agassizii
ENSLAFG00000028731	PUS1	100	81.941	ENSGGOG00000009178	PUS1	88	83.283	Gorilla_gorilla
ENSLAFG00000028731	PUS1	95	68.079	ENSHBUG00000001316	pus1	91	68.079	Haplochromis_burtoni
ENSLAFG00000028731	PUS1	100	77.358	ENSHGLG00000016086	PUS1	94	77.358	Heterocephalus_glaber_female
ENSLAFG00000028731	PUS1	100	77.358	ENSHGLG00100019362	PUS1	94	77.358	Heterocephalus_glaber_male
ENSLAFG00000028731	PUS1	92	68.986	ENSHCOG00000014288	pus1	80	68.986	Hippocampus_comes
ENSLAFG00000028731	PUS1	92	72.807	ENSIPUG00000010387	pus1	86	72.807	Ictalurus_punctatus
ENSLAFG00000028731	PUS1	97	79.444	ENSSTOG00000011245	PUS1	88	79.032	Ictidomys_tridecemlineatus
ENSLAFG00000028731	PUS1	100	78.437	ENSJJAG00000000088	Pus1	88	78.437	Jaculus_jaculus
ENSLAFG00000028731	PUS1	94	67.898	ENSKMAG00000012702	pus1	84	67.898	Kryptolebias_marmoratus
ENSLAFG00000028731	PUS1	96	66.111	ENSLBEG00000002845	pus1	89	66.944	Labrus_bergylta
ENSLAFG00000028731	PUS1	93	72.622	ENSLACG00000018598	PUS1	92	69.811	Latimeria_chalumnae
ENSLAFG00000028731	PUS1	88	57.846	ENSLACG00000016044	-	98	57.846	Latimeria_chalumnae
ENSLAFG00000028731	PUS1	92	73.314	ENSLOCG00000006127	pus1	86	73.314	Lepisosteus_oculatus
ENSLAFG00000028731	PUS1	100	82.749	ENSMFAG00000041194	PUS1	92	82.749	Macaca_fascicularis
ENSLAFG00000028731	PUS1	100	80.593	ENSMMUG00000031463	PUS1	92	83.099	Macaca_mulatta
ENSLAFG00000028731	PUS1	100	83.019	ENSMNEG00000002814	PUS1	90	84.195	Macaca_nemestrina
ENSLAFG00000028731	PUS1	89	84.195	ENSMLEG00000043560	PUS1	100	84.404	Mandrillus_leucophaeus
ENSLAFG00000028731	PUS1	93	68.182	ENSMAMG00000007371	pus1	84	68.182	Mastacembelus_armatus
ENSLAFG00000028731	PUS1	95	68.079	ENSMZEG00005017746	pus1	84	68.079	Maylandia_zebra
ENSLAFG00000028731	PUS1	88	74.468	ENSMGAG00000001958	PUS1	100	74.468	Meleagris_gallopavo
ENSLAFG00000028731	PUS1	100	80.323	ENSMAUG00000001482	Pus1	87	80.323	Mesocricetus_auratus
ENSLAFG00000028731	PUS1	100	78.400	ENSMICG00000030980	PUS1	93	78.400	Microcebus_murinus
ENSLAFG00000028731	PUS1	100	80.054	ENSMOCG00000022311	Pus1	87	80.054	Microtus_ochrogaster
ENSLAFG00000028731	PUS1	97	64.096	ENSMMOG00000021022	pus1	97	64.096	Mola_mola
ENSLAFG00000028731	PUS1	99	72.922	ENSMODG00000015551	PUS1	84	73.458	Monodelphis_domestica
ENSLAFG00000028731	PUS1	97	65.097	ENSMALG00000013202	pus1	86	65.928	Monopterus_albus
ENSLAFG00000028731	PUS1	100	81.132	MGP_CAROLIEiJ_G0027551	Pus1	94	81.132	Mus_caroli
ENSLAFG00000028731	PUS1	100	81.132	ENSMUSG00000029507	Pus1	94	81.132	Mus_musculus
ENSLAFG00000028731	PUS1	100	80.593	MGP_PahariEiJ_G0024133	Pus1	94	80.593	Mus_pahari
ENSLAFG00000028731	PUS1	100	81.132	MGP_SPRETEiJ_G0028549	Pus1	94	81.132	Mus_spretus
ENSLAFG00000028731	PUS1	98	78.846	ENSMPUG00000002314	PUS1	92	78.846	Mustela_putorius_furo
ENSLAFG00000028731	PUS1	99	77.174	ENSMLUG00000015790	PUS1	100	77.446	Myotis_lucifugus
ENSLAFG00000028731	PUS1	100	80.863	ENSNGAG00000012976	Pus1	87	80.863	Nannospalax_galili
ENSLAFG00000028731	PUS1	95	67.797	ENSNBRG00000020502	pus1	94	68.286	Neolamprologus_brichardi
ENSLAFG00000028731	PUS1	100	81.132	ENSNLEG00000008505	PUS1	100	84.591	Nomascus_leucogenys
ENSLAFG00000028731	PUS1	93	65.896	ENSMEUG00000002825	PUS1	93	65.896	Notamacropus_eugenii
ENSLAFG00000028731	PUS1	93	72.174	ENSOPRG00000002701	-	91	72.174	Ochotona_princeps
ENSLAFG00000028731	PUS1	99	76.757	ENSODEG00000008248	PUS1	94	78.333	Octodon_degus
ENSLAFG00000028731	PUS1	95	66.852	ENSONIG00000003803	pus1	88	69.649	Oreochromis_niloticus
ENSLAFG00000028731	PUS1	98	69.919	ENSOANG00000010619	PUS1	86	69.705	Ornithorhynchus_anatinus
ENSLAFG00000028731	PUS1	92	83.041	ENSOCUG00000007310	PUS1	77	82.670	Oryctolagus_cuniculus
ENSLAFG00000028731	PUS1	95	67.989	ENSORLG00000010787	pus1	85	67.989	Oryzias_latipes
ENSLAFG00000028731	PUS1	94	68.946	ENSORLG00020011483	pus1	84	68.946	Oryzias_latipes_hni
ENSLAFG00000028731	PUS1	95	68.555	ENSORLG00015023012	pus1	91	68.555	Oryzias_latipes_hsok
ENSLAFG00000028731	PUS1	96	66.944	ENSOMEG00000022655	pus1	85	66.944	Oryzias_melastigma
ENSLAFG00000028731	PUS1	100	79.784	ENSOGAG00000008720	PUS1	96	79.784	Otolemur_garnettii
ENSLAFG00000028731	PUS1	100	81.132	ENSOARG00000013316	PUS1	85	81.132	Ovis_aries
ENSLAFG00000028731	PUS1	100	81.941	ENSPPAG00000040971	PUS1	88	82.979	Pan_paniscus
ENSLAFG00000028731	PUS1	98	80.495	ENSPPRG00000015456	PUS1	92	80.495	Panthera_pardus
ENSLAFG00000028731	PUS1	92	82.164	ENSPTIG00000004201	PUS1	91	81.429	Panthera_tigris_altaica
ENSLAFG00000028731	PUS1	100	81.671	ENSPTRG00000005643	PUS1	88	82.675	Pan_troglodytes
ENSLAFG00000028731	PUS1	100	82.749	ENSPANG00000000376	PUS1	90	83.891	Papio_anubis
ENSLAFG00000028731	PUS1	93	67.341	ENSPKIG00000019369	pus1	79	67.341	Paramormyrops_kingsleyae
ENSLAFG00000028731	PUS1	96	71.667	ENSPSIG00000016432	PUS1	87	70.509	Pelodiscus_sinensis
ENSLAFG00000028731	PUS1	91	68.437	ENSPMGG00000004522	pus1	89	68.437	Periophthalmus_magnuspinnatus
ENSLAFG00000028731	PUS1	100	80.863	ENSPEMG00000013448	Pus1	88	80.863	Peromyscus_maniculatus_bairdii
ENSLAFG00000028731	PUS1	87	61.420	ENSPMAG00000004636	pus1	98	61.420	Petromyzon_marinus
ENSLAFG00000028731	PUS1	79	66.667	ENSPCIG00000022609	-	75	63.438	Phascolarctos_cinereus
ENSLAFG00000028731	PUS1	99	66.033	ENSPFOG00000019669	pus1	88	66.033	Poecilia_formosa
ENSLAFG00000028731	PUS1	99	66.033	ENSPLAG00000002692	-	88	66.033	Poecilia_latipinna
ENSLAFG00000028731	PUS1	99	66.033	ENSPLAG00000007185	pus1	88	66.033	Poecilia_latipinna
ENSLAFG00000028731	PUS1	99	65.217	ENSPMEG00000011115	PUS1	88	66.033	Poecilia_mexicana
ENSLAFG00000028731	PUS1	99	65.217	ENSPMEG00000006038	pus1	91	66.033	Poecilia_mexicana
ENSLAFG00000028731	PUS1	99	65.761	ENSPREG00000007231	pus1	96	68.678	Poecilia_reticulata
ENSLAFG00000028731	PUS1	100	81.671	ENSPPYG00000005132	PUS1	87	81.671	Pongo_abelii
ENSLAFG00000028731	PUS1	71	88.931	ENSPCAG00000009110	-	64	88.931	Procavia_capensis
ENSLAFG00000028731	PUS1	100	70.889	ENSPCOG00000015595	PUS1	92	70.889	Propithecus_coquereli
ENSLAFG00000028731	PUS1	95	67.797	ENSPNYG00000013571	pus1	84	67.797	Pundamilia_nyererei
ENSLAFG00000028731	PUS1	92	70.058	ENSPNAG00000003938	pus1	82	70.058	Pygocentrus_nattereri
ENSLAFG00000028731	PUS1	100	80.323	ENSRNOG00000037500	Pus1	87	80.323	Rattus_norvegicus
ENSLAFG00000028731	PUS1	100	81.941	ENSRBIG00000043177	PUS1	93	81.941	Rhinopithecus_bieti
ENSLAFG00000028731	PUS1	100	81.941	ENSRROG00000039744	PUS1	89	83.279	Rhinopithecus_roxellana
ENSLAFG00000028731	PUS1	88	45.865	YPL212C	-	60	45.865	Saccharomyces_cerevisiae
ENSLAFG00000028731	PUS1	84	30.914	YGL063W	-	94	30.914	Saccharomyces_cerevisiae
ENSLAFG00000028731	PUS1	100	81.402	ENSSBOG00000023593	PUS1	93	82.209	Saimiri_boliviensis_boliviensis
ENSLAFG00000028731	PUS1	98	73.913	ENSSHAG00000013193	PUS1	87	74.510	Sarcophilus_harrisii
ENSLAFG00000028731	PUS1	91	72.353	ENSSFOG00015003463	pus1	82	69.041	Scleropages_formosus
ENSLAFG00000028731	PUS1	93	68.103	ENSSMAG00000019075	pus1	83	67.806	Scophthalmus_maximus
ENSLAFG00000028731	PUS1	94	68.272	ENSSDUG00000007102	pus1	83	68.927	Seriola_dumerili
ENSLAFG00000028731	PUS1	94	67.705	ENSSLDG00000022850	pus1	83	68.362	Seriola_lalandi_dorsalis
ENSLAFG00000028731	PUS1	82	71.382	ENSSARG00000008367	PUS1	98	71.711	Sorex_araneus
ENSLAFG00000028731	PUS1	99	70.241	ENSSPUG00000010009	PUS1	93	70.241	Sphenodon_punctatus
ENSLAFG00000028731	PUS1	92	68.986	ENSSPAG00000006272	pus1	88	68.986	Stegastes_partitus
ENSLAFG00000028731	PUS1	100	80.593	ENSSSCG00000009741	PUS1	93	80.593	Sus_scrofa
ENSLAFG00000028731	PUS1	89	77.879	ENSTGUG00000008068	PUS1	100	77.879	Taeniopygia_guttata
ENSLAFG00000028731	PUS1	95	67.232	ENSTRUG00000002198	pus1	91	68.079	Takifugu_rubripes
ENSLAFG00000028731	PUS1	96	66.482	ENSTNIG00000003942	pus1	92	66.759	Tetraodon_nigroviridis
ENSLAFG00000028731	PUS1	100	79.784	ENSTTRG00000000632	PUS1	87	79.784	Tursiops_truncatus
ENSLAFG00000028731	PUS1	98	81.044	ENSUAMG00000017197	PUS1	92	81.044	Ursus_americanus
ENSLAFG00000028731	PUS1	96	81.127	ENSUMAG00000002831	PUS1	100	82.229	Ursus_maritimus
ENSLAFG00000028731	PUS1	97	79.006	ENSVVUG00000004199	PUS1	83	79.224	Vulpes_vulpes
ENSLAFG00000028731	PUS1	99	67.209	ENSXETG00000002030	pus1	92	67.209	Xenopus_tropicalis
ENSLAFG00000028731	PUS1	86	49.533	ENSXETG00000033640	-	100	49.533	Xenopus_tropicalis
ENSLAFG00000028731	PUS1	94	67.614	ENSXCOG00000004722	pus1	91	67.614	Xiphophorus_couchianus
ENSLAFG00000028731	PUS1	94	67.330	ENSXMAG00000000988	pus1	84	67.330	Xiphophorus_maculatus