EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000028909 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 1169 bases
Position: chrscaffold_2:68236330-68237498
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000018921	RRM_1	PF00076.22	1.5e-08	1	1
ENSLAFP00000018921	RRM_3	PF08777.11	1.1e-10	1	1
ENSLAFP00000018921	La	PF05383.17	1.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000033974	-	1146	-	ENSLAFP00000018921	381 (aa)	-	G3TTL3

Gene Model

Click here to download ENSLAFG00000028909's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000028909's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000028909	-	100	80.332	ENSLAFG00000000867	-	100	81.517
ENSLAFG00000028909	-	75	59.468	ENSLAFG00000026721	-	99	59.468

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000028909	-	100	79.167	ENSG00000138385	SSB	100	87.500	Homo_sapiens
ENSLAFG00000028909	-	99	47.654	ENSAPOG00000003448	ssb	100	48.395	Acanthochromis_polyacanthus
ENSLAFG00000028909	-	100	75.714	ENSAMEG00000010507	SSB	100	75.714	Ailuropoda_melanoleuca
ENSLAFG00000028909	-	91	49.864	ENSACIG00000001738	ssb	97	50.678	Amphilophus_citrinellus
ENSLAFG00000028909	-	99	48.148	ENSAOCG00000020398	ssb	100	48.889	Amphiprion_ocellaris
ENSLAFG00000028909	-	99	48.642	ENSAPEG00000020395	ssb	100	49.383	Amphiprion_percula
ENSLAFG00000028909	-	99	51.111	ENSATEG00000016884	ssb	100	51.852	Anabas_testudineus
ENSLAFG00000028909	-	100	59.670	ENSAPLG00000006109	SSB	100	60.613	Anas_platyrhynchos
ENSLAFG00000028909	-	100	58.025	ENSACAG00000017008	SSB	99	58.025	Anolis_carolinensis
ENSLAFG00000028909	-	100	73.500	ENSANAG00000027195	-	100	73.500	Aotus_nancymaae
ENSLAFG00000028909	-	99	48.120	ENSACLG00000010798	ssb	100	48.622	Astatotilapia_calliptera
ENSLAFG00000028909	-	99	46.078	ENSAMXG00000012606	ssb	100	46.829	Astyanax_mexicanus
ENSLAFG00000028909	-	100	79.012	ENSBTAG00000008716	SSB	100	79.012	Bos_taurus
ENSLAFG00000028909	-	100	78.765	ENSCJAG00000045073	SSB	100	78.765	Callithrix_jacchus
ENSLAFG00000028909	-	100	78.079	ENSCAFG00000012418	SSB	100	78.079	Canis_familiaris
ENSLAFG00000028909	-	100	78.079	ENSCAFG00020002900	SSB	100	78.079	Canis_lupus_dingo
ENSLAFG00000028909	-	100	74.752	ENSCHIG00000022196	-	100	74.752	Capra_hircus
ENSLAFG00000028909	-	100	79.012	ENSCHIG00000022624	-	100	79.012	Capra_hircus
ENSLAFG00000028909	-	100	79.753	ENSTSYG00000000097	SSB	100	79.753	Carlito_syrichta
ENSLAFG00000028909	-	100	79.753	ENSCPOG00000003338	SSB	100	79.753	Cavia_porcellus
ENSLAFG00000028909	-	100	79.506	ENSCCAG00000035147	SSB	100	79.506	Cebus_capucinus
ENSLAFG00000028909	-	100	57.037	ENSCATG00000042909	-	100	57.037	Cercocebus_atys
ENSLAFG00000028909	-	100	61.235	ENSCATG00000036701	SSB	100	61.235	Cercocebus_atys
ENSLAFG00000028909	-	100	80.000	ENSCLAG00000015617	-	100	80.000	Chinchilla_lanigera
ENSLAFG00000028909	-	98	71.285	ENSCSAG00000018390	-	100	71.285	Chlorocebus_sabaeus
ENSLAFG00000028909	-	100	79.506	ENSCSAG00000015200	SSB	89	79.506	Chlorocebus_sabaeus
ENSLAFG00000028909	-	100	79.753	ENSCHOG00000007763	SSB	100	79.753	Choloepus_hoffmanni
ENSLAFG00000028909	-	100	66.504	ENSCPBG00000006519	SSB	100	66.748	Chrysemys_picta_bellii
ENSLAFG00000028909	-	98	62.312	ENSCANG00000028838	-	95	62.312	Colobus_angolensis_palliatus
ENSLAFG00000028909	-	100	67.407	ENSCANG00000033240	-	100	67.407	Colobus_angolensis_palliatus
ENSLAFG00000028909	-	100	79.753	ENSCANG00000027695	SSB	100	79.753	Colobus_angolensis_palliatus
ENSLAFG00000028909	-	100	66.098	ENSCGRG00001024831	Ssb	100	67.073	Cricetulus_griseus_chok1gshd
ENSLAFG00000028909	-	100	66.098	ENSCGRG00000005387	Ssb	100	67.073	Cricetulus_griseus_crigri
ENSLAFG00000028909	-	97	49.246	ENSCSEG00000011599	ssb	99	50.251	Cynoglossus_semilaevis
ENSLAFG00000028909	-	99	49.754	ENSCVAG00000021558	ssb	100	50.493	Cyprinodon_variegatus
ENSLAFG00000028909	-	98	48.259	ENSDARG00000029252	ssb	99	48.883	Danio_rerio
ENSLAFG00000028909	-	100	79.259	ENSDNOG00000013450	SSB	100	79.259	Dasypus_novemcinctus
ENSLAFG00000028909	-	100	69.830	ENSDORG00000005543	Ssb	100	70.073	Dipodomys_ordii
ENSLAFG00000028909	-	62	84.080	ENSETEG00000004614	-	61	84.080	Echinops_telfairi
ENSLAFG00000028909	-	90	40.327	ENSEBUG00000001237	ssb	92	40.896	Eptatretus_burgeri
ENSLAFG00000028909	-	100	79.506	ENSEASG00005022835	SSB	100	79.506	Equus_asinus_asinus
ENSLAFG00000028909	-	100	79.753	ENSECAG00000018495	SSB	100	79.753	Equus_caballus
ENSLAFG00000028909	-	76	68.750	ENSEEUG00000008077	SSB	78	68.750	Erinaceus_europaeus
ENSLAFG00000028909	-	99	51.724	ENSELUG00000020929	ssb	100	52.709	Esox_lucius
ENSLAFG00000028909	-	100	78.818	ENSFCAG00000011601	SSB	100	78.818	Felis_catus
ENSLAFG00000028909	-	100	62.222	ENSFALG00000000930	SSB	100	63.300	Ficedula_albicollis
ENSLAFG00000028909	-	100	79.753	ENSFDAG00000000598	SSB	100	79.753	Fukomys_damarensis
ENSLAFG00000028909	-	71	45.638	ENSFHEG00000003268	ssb	95	47.213	Fundulus_heteroclitus
ENSLAFG00000028909	-	97	47.160	ENSGMOG00000002664	ssb	100	47.643	Gadus_morhua
ENSLAFG00000028909	-	100	63.547	ENSGALG00000009677	SSB	100	63.547	Gallus_gallus
ENSLAFG00000028909	-	99	47.160	ENSGAFG00000002749	ssb	100	47.901	Gambusia_affinis
ENSLAFG00000028909	-	97	47.525	ENSGACG00000005107	ssb	99	48.267	Gasterosteus_aculeatus
ENSLAFG00000028909	-	100	66.259	ENSGAGG00000007807	SSB	100	66.504	Gopherus_agassizii
ENSLAFG00000028909	-	100	64.938	ENSGGOG00000024891	-	100	64.938	Gorilla_gorilla
ENSLAFG00000028909	-	51	72.646	ENSGGOG00000023471	-	91	72.646	Gorilla_gorilla
ENSLAFG00000028909	-	99	47.619	ENSHBUG00000006584	ssb	100	48.120	Haplochromis_burtoni
ENSLAFG00000028909	-	100	78.641	ENSHGLG00000017580	-	100	78.641	Heterocephalus_glaber_female
ENSLAFG00000028909	-	100	74.568	ENSHGLG00000004478	-	100	74.568	Heterocephalus_glaber_female
ENSLAFG00000028909	-	50	85.470	ENSHGLG00000011331	-	96	85.470	Heterocephalus_glaber_female
ENSLAFG00000028909	-	100	71.852	ENSHGLG00000005832	-	100	71.852	Heterocephalus_glaber_female
ENSLAFG00000028909	-	100	78.641	ENSHGLG00100003084	-	100	78.641	Heterocephalus_glaber_male
ENSLAFG00000028909	-	100	69.059	ENSHGLG00100008767	-	100	69.059	Heterocephalus_glaber_male
ENSLAFG00000028909	-	97	48.101	ENSHCOG00000019011	ssb	99	48.354	Hippocampus_comes
ENSLAFG00000028909	-	97	50.623	ENSIPUG00000003681	SSB	99	50.995	Ictalurus_punctatus
ENSLAFG00000028909	-	100	79.208	ENSSTOG00000008416	SSB	100	79.208	Ictidomys_tridecemlineatus
ENSLAFG00000028909	-	99	57.179	ENSJJAG00000016250	-	99	57.179	Jaculus_jaculus
ENSLAFG00000028909	-	100	66.430	ENSJJAG00000023158	-	100	66.430	Jaculus_jaculus
ENSLAFG00000028909	-	99	49.136	ENSKMAG00000017317	ssb	100	49.630	Kryptolebias_marmoratus
ENSLAFG00000028909	-	99	47.901	ENSLBEG00000017345	ssb	100	49.136	Labrus_bergylta
ENSLAFG00000028909	-	99	57.248	ENSLACG00000014056	SSB	99	59.069	Latimeria_chalumnae
ENSLAFG00000028909	-	97	56.423	ENSLOCG00000007933	ssb	98	56.892	Lepisosteus_oculatus
ENSLAFG00000028909	-	87	67.514	ENSMFAG00000041478	-	99	67.514	Macaca_fascicularis
ENSLAFG00000028909	-	100	79.506	ENSMFAG00000039066	SSB	100	79.506	Macaca_fascicularis
ENSLAFG00000028909	-	100	79.506	ENSMMUG00000023051	SSB	100	79.506	Macaca_mulatta
ENSLAFG00000028909	-	100	66.832	ENSMMUG00000011724	-	97	66.832	Macaca_mulatta
ENSLAFG00000028909	-	99	53.846	ENSMMUG00000039889	-	100	54.094	Macaca_mulatta
ENSLAFG00000028909	-	87	67.514	ENSMNEG00000034698	-	99	67.514	Macaca_nemestrina
ENSLAFG00000028909	-	100	74.055	ENSMNEG00000028321	SSB	100	74.307	Macaca_nemestrina
ENSLAFG00000028909	-	100	58.824	ENSMLEG00000042644	-	100	58.824	Mandrillus_leucophaeus
ENSLAFG00000028909	-	100	79.506	ENSMLEG00000035717	SSB	100	79.506	Mandrillus_leucophaeus
ENSLAFG00000028909	-	99	50.617	ENSMAMG00000004800	ssb	100	51.852	Mastacembelus_armatus
ENSLAFG00000028909	-	99	48.120	ENSMZEG00005005749	ssb	100	48.622	Maylandia_zebra
ENSLAFG00000028909	-	100	63.547	ENSMGAG00000010328	SSB	99	68.780	Meleagris_gallopavo
ENSLAFG00000028909	-	98	72.980	ENSMICG00000033304	-	94	75.339	Microcebus_murinus
ENSLAFG00000028909	-	99	80.149	ENSMICG00000028252	-	99	80.149	Microcebus_murinus
ENSLAFG00000028909	-	100	53.333	ENSMODG00000007027	-	100	53.333	Monodelphis_domestica
ENSLAFG00000028909	-	100	65.783	ENSMODG00000008227	-	100	66.024	Monodelphis_domestica
ENSLAFG00000028909	-	100	55.867	ENSMODG00000019271	-	100	55.867	Monodelphis_domestica
ENSLAFG00000028909	-	82	53.030	ENSMALG00000008045	ssb	90	51.596	Monopterus_albus
ENSLAFG00000028909	-	100	65.321	MGP_CAROLIEiJ_G0023629	-	100	80.435	Mus_caroli
ENSLAFG00000028909	-	100	64.846	ENSMUSG00000068882	Ssb	100	80.435	Mus_musculus
ENSLAFG00000028909	-	100	62.945	MGP_PahariEiJ_G0025081	-	100	80.435	Mus_pahari
ENSLAFG00000028909	-	100	64.846	MGP_SPRETEiJ_G0024551	Ssb	100	80.435	Mus_spretus
ENSLAFG00000028909	-	100	78.765	ENSMPUG00000000785	SSB	100	78.765	Mustela_putorius_furo
ENSLAFG00000028909	-	100	74.524	ENSMLUG00000016316	SSB	100	74.524	Myotis_lucifugus
ENSLAFG00000028909	-	99	48.120	ENSNBRG00000012661	ssb	100	48.622	Neolamprologus_brichardi
ENSLAFG00000028909	-	100	79.753	ENSNLEG00000004958	SSB	100	79.753	Nomascus_leucogenys
ENSLAFG00000028909	-	100	55.665	ENSNLEG00000028754	-	100	56.404	Nomascus_leucogenys
ENSLAFG00000028909	-	62	72.984	ENSMEUG00000001650	-	100	72.984	Notamacropus_eugenii
ENSLAFG00000028909	-	53	77.419	ENSOPRG00000008475	-	100	59.722	Ochotona_princeps
ENSLAFG00000028909	-	93	73.475	ENSODEG00000004202	-	100	73.475	Octodon_degus
ENSLAFG00000028909	-	99	47.619	ENSONIG00000008776	ssb	100	48.120	Oreochromis_niloticus
ENSLAFG00000028909	-	100	69.136	ENSOANG00000008543	SSB	100	69.383	Ornithorhynchus_anatinus
ENSLAFG00000028909	-	100	79.506	ENSOCUG00000010396	SSB	100	79.506	Oryctolagus_cuniculus
ENSLAFG00000028909	-	99	49.877	ENSORLG00000017208	ssb	100	50.370	Oryzias_latipes
ENSLAFG00000028909	-	99	49.383	ENSORLG00020022574	ssb	100	50.123	Oryzias_latipes_hni
ENSLAFG00000028909	-	99	48.889	ENSORLG00015016592	ssb	100	49.877	Oryzias_latipes_hsok
ENSLAFG00000028909	-	99	50.000	ENSOMEG00000003193	ssb	100	50.743	Oryzias_melastigma
ENSLAFG00000028909	-	100	74.645	ENSOGAG00000029768	SSB	100	74.645	Otolemur_garnettii
ENSLAFG00000028909	-	100	78.519	ENSOARG00000002906	SSB	100	78.519	Ovis_aries
ENSLAFG00000028909	-	100	79.167	ENSPPAG00000042673	SSB	100	79.167	Pan_paniscus
ENSLAFG00000028909	-	97	62.211	ENSPPAG00000006189	-	96	65.668	Pan_paniscus
ENSLAFG00000028909	-	100	63.951	ENSPPAG00000032427	-	100	78.295	Pan_paniscus
ENSLAFG00000028909	-	100	78.818	ENSPPRG00000006599	SSB	100	78.818	Panthera_pardus
ENSLAFG00000028909	-	100	78.571	ENSPTIG00000011021	SSB	97	78.571	Panthera_tigris_altaica
ENSLAFG00000028909	-	100	79.167	ENSPTRG00000012620	SSB	100	79.167	Pan_troglodytes
ENSLAFG00000028909	-	100	60.247	ENSPTRG00000042880	-	100	60.247	Pan_troglodytes
ENSLAFG00000028909	-	100	54.208	ENSPANG00000034126	-	100	54.455	Papio_anubis
ENSLAFG00000028909	-	100	79.506	ENSPANG00000007440	SSB	100	79.506	Papio_anubis
ENSLAFG00000028909	-	98	56.430	ENSPANG00000031877	-	95	56.430	Papio_anubis
ENSLAFG00000028909	-	99	52.970	ENSPKIG00000019325	ssb	99	53.465	Paramormyrops_kingsleyae
ENSLAFG00000028909	-	100	63.814	ENSPSIG00000002265	SSB	93	64.059	Pelodiscus_sinensis
ENSLAFG00000028909	-	86	44.818	ENSPMGG00000020075	ssb	93	46.742	Periophthalmus_magnuspinnatus
ENSLAFG00000028909	-	81	45.181	ENSPMAG00000002982	ssb	89	44.301	Petromyzon_marinus
ENSLAFG00000028909	-	100	68.719	ENSPCIG00000028591	-	100	69.704	Phascolarctos_cinereus
ENSLAFG00000028909	-	99	48.148	ENSPFOG00000009650	ssb	100	49.630	Poecilia_formosa
ENSLAFG00000028909	-	99	47.901	ENSPLAG00000020498	ssb	100	49.383	Poecilia_latipinna
ENSLAFG00000028909	-	99	47.901	ENSPMEG00000001051	ssb	100	48.395	Poecilia_mexicana
ENSLAFG00000028909	-	93	48.303	ENSPREG00000003708	ssb	99	49.086	Poecilia_reticulata
ENSLAFG00000028909	-	100	79.753	ENSPPYG00000012919	SSB	100	79.753	Pongo_abelii
ENSLAFG00000028909	-	94	79.634	ENSPCAG00000010276	SSB	100	79.896	Procavia_capensis
ENSLAFG00000028909	-	100	78.025	ENSPCOG00000015741	-	100	78.025	Propithecus_coquereli
ENSLAFG00000028909	-	100	72.704	ENSPCOG00000023189	-	100	72.704	Propithecus_coquereli
ENSLAFG00000028909	-	87	77.904	ENSPVAG00000006615	SSB	100	77.904	Pteropus_vampyrus
ENSLAFG00000028909	-	99	48.120	ENSPNYG00000006444	ssb	100	48.622	Pundamilia_nyererei
ENSLAFG00000028909	-	99	48.655	ENSPNAG00000011708	ssb	100	49.512	Pygocentrus_nattereri
ENSLAFG00000028909	-	100	66.176	ENSRNOG00000011606	AABR07061825.1	100	66.176	Rattus_norvegicus
ENSLAFG00000028909	-	100	65.796	ENSRNOG00000007998	Ssb	100	65.796	Rattus_norvegicus
ENSLAFG00000028909	-	93	65.435	ENSRBIG00000041232	-	98	65.435	Rhinopithecus_bieti
ENSLAFG00000028909	-	100	65.854	ENSRBIG00000041972	SSB	88	87.826	Rhinopithecus_bieti
ENSLAFG00000028909	-	100	56.897	ENSRBIG00000029918	-	100	56.897	Rhinopithecus_bieti
ENSLAFG00000028909	-	88	73.109	ENSRBIG00000041608	-	98	73.109	Rhinopithecus_bieti
ENSLAFG00000028909	-	97	71.072	ENSRROG00000034102	-	98	71.357	Rhinopithecus_roxellana
ENSLAFG00000028909	-	100	65.764	ENSRROG00000007149	-	100	65.764	Rhinopithecus_roxellana
ENSLAFG00000028909	-	100	79.753	ENSRROG00000040346	SSB	100	79.753	Rhinopithecus_roxellana
ENSLAFG00000028909	-	98	66.667	ENSRROG00000031684	-	100	66.667	Rhinopithecus_roxellana
ENSLAFG00000028909	-	100	79.753	ENSSBOG00000027204	SSB	100	79.753	Saimiri_boliviensis_boliviensis
ENSLAFG00000028909	-	100	68.227	ENSSHAG00000018062	SSB	100	69.212	Sarcophilus_harrisii
ENSLAFG00000028909	-	99	55.501	ENSSFOG00015000550	ssb	100	56.479	Scleropages_formosus
ENSLAFG00000028909	-	97	47.558	ENSSMAG00000013885	ssb	99	49.598	Scophthalmus_maximus
ENSLAFG00000028909	-	99	49.877	ENSSDUG00000020117	ssb	100	50.617	Seriola_dumerili
ENSLAFG00000028909	-	99	47.761	ENSSLDG00000002525	ssb	100	48.756	Seriola_lalandi_dorsalis
ENSLAFG00000028909	-	94	69.974	ENSSARG00000007747	SSB	100	69.974	Sorex_araneus
ENSLAFG00000028909	-	100	63.300	ENSSPUG00000012112	SSB	100	63.547	Sphenodon_punctatus
ENSLAFG00000028909	-	99	48.395	ENSSPAG00000005696	ssb	100	49.136	Stegastes_partitus
ENSLAFG00000028909	-	98	65.163	ENSSSCG00000015938	SSB	98	65.995	Sus_scrofa
ENSLAFG00000028909	-	100	61.425	ENSTGUG00000007942	SSB	100	62.990	Taeniopygia_guttata
ENSLAFG00000028909	-	99	48.883	ENSTRUG00000017839	ssb	100	49.876	Takifugu_rubripes
ENSLAFG00000028909	-	90	51.247	ENSTNIG00000000915	ssb	100	51.247	Tetraodon_nigroviridis
ENSLAFG00000028909	-	81	87.826	ENSTBEG00000009056	SSB	81	87.826	Tupaia_belangeri
ENSLAFG00000028909	-	100	78.079	ENSTTRG00000002152	SSB	100	78.079	Tursiops_truncatus
ENSLAFG00000028909	-	93	79.841	ENSUAMG00000027833	SSB	99	79.841	Ursus_americanus
ENSLAFG00000028909	-	100	78.818	ENSUMAG00000013907	SSB	100	78.818	Ursus_maritimus
ENSLAFG00000028909	-	100	78.765	ENSVPAG00000007183	SSB	100	78.765	Vicugna_pacos
ENSLAFG00000028909	-	100	78.079	ENSVVUG00000016573	SSB	78	78.079	Vulpes_vulpes
ENSLAFG00000028909	-	99	50.852	ENSXETG00000025402	ssb	96	52.068	Xenopus_tropicalis
ENSLAFG00000028909	-	93	46.073	ENSXCOG00000019109	ssb	93	53.906	Xiphophorus_couchianus
ENSLAFG00000028909	-	99	47.160	ENSXMAG00000004888	ssb	100	47.901	Xiphophorus_maculatus