EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000028984 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 1993 bases
Position: chrscaffold_120:2107176-2109168
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000022839	MMR_HSR1	PF01926.23	7.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000035673	-	618	-	ENSLAFP00000022839	205 (aa)	-	G3U4T1

Gene Model

Click here to download ENSLAFG00000028984's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000028984's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000028984	-	83	37.791	ENSLAFG00000009222	RAB25	79	37.791
ENSLAFG00000028984	-	77	33.333	ENSLAFG00000001217	RERG	77	33.333
ENSLAFG00000028984	-	98	44.335	ENSLAFG00000000166	RAB9B	99	44.335
ENSLAFG00000028984	-	78	33.540	ENSLAFG00000002742	DNAJC27	59	33.540
ENSLAFG00000028984	-	85	39.011	ENSLAFG00000030959	RAB39B	84	39.011
ENSLAFG00000028984	-	67	32.168	ENSLAFG00000016780	-	95	32.168
ENSLAFG00000028984	-	83	38.418	ENSLAFG00000009905	RAB6B	92	38.418
ENSLAFG00000028984	-	96	35.149	ENSLAFG00000008321	RAB5A	90	35.149
ENSLAFG00000028984	-	84	32.609	ENSLAFG00000013385	RAB34	70	32.609
ENSLAFG00000028984	-	99	46.341	ENSLAFG00000022900	RAB9A	99	46.341
ENSLAFG00000028984	-	77	36.250	ENSLAFG00000018009	RAB5B	68	36.250
ENSLAFG00000028984	-	94	35.354	ENSLAFG00000013598	RAB11B	89	35.354
ENSLAFG00000028984	-	77	39.873	ENSLAFG00000010711	RAB30	76	39.873
ENSLAFG00000028984	-	86	33.146	ENSLAFG00000007209	RAB23	73	33.146
ENSLAFG00000028984	-	73	34.868	ENSLAFG00000009693	RAB36	56	34.868
ENSLAFG00000028984	-	99	33.649	ENSLAFG00000022351	RAB33B	88	33.649
ENSLAFG00000028984	-	78	37.500	ENSLAFG00000021408	RAB1B	78	37.500
ENSLAFG00000028984	-	79	36.810	ENSLAFG00000003688	RAB22A	82	36.810
ENSLAFG00000028984	-	95	34.673	ENSLAFG00000011418	RAB11A	90	34.673
ENSLAFG00000028984	-	75	35.065	ENSLAFG00000000202	-	86	35.065
ENSLAFG00000028984	-	75	33.117	ENSLAFG00000000691	RHEB	82	33.117
ENSLAFG00000028984	-	78	37.500	ENSLAFG00000016666	RAB1A	76	37.500
ENSLAFG00000028984	-	82	34.524	ENSLAFG00000015582	RAB18	80	34.524
ENSLAFG00000028984	-	72	30.612	ENSLAFG00000020706	NRAS	83	31.677
ENSLAFG00000028984	-	73	42.384	ENSLAFG00000008832	RAB33A	62	42.384
ENSLAFG00000028984	-	76	31.847	ENSLAFG00000010809	MRAS	78	33.333
ENSLAFG00000028984	-	87	31.667	ENSLAFG00000023194	RAB15	83	31.667
ENSLAFG00000028984	-	100	46.635	ENSLAFG00000007945	RAB7A	100	46.635

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000028984	-	83	54.971	ENSACIG00000011024	si:dkey-13a21.4	84	54.971	Amphilophus_citrinellus
ENSLAFG00000028984	-	83	53.801	ENSAOCG00000020491	si:dkey-13a21.4	84	53.801	Amphiprion_ocellaris
ENSLAFG00000028984	-	83	52.632	ENSAPEG00000023338	si:dkey-13a21.4	77	52.632	Amphiprion_percula
ENSLAFG00000028984	-	86	55.307	ENSATEG00000014958	si:dkey-13a21.4	88	55.307	Anabas_testudineus
ENSLAFG00000028984	-	97	51.759	ENSACAG00000012345	-	97	51.759	Anolis_carolinensis
ENSLAFG00000028984	-	85	53.143	ENSACLG00000021109	si:dkey-13a21.4	85	53.143	Astatotilapia_calliptera
ENSLAFG00000028984	-	81	54.438	ENSAMXG00000032663	si:dkey-13a21.4	78	54.438	Astyanax_mexicanus
ENSLAFG00000028984	-	96	48.756	WBGene00004271	rab-7	96	48.756	Caenorhabditis_elegans
ENSLAFG00000028984	-	83	55.556	ENSCVAG00000001150	si:dkey-13a21.4	84	55.556	Cyprinodon_variegatus
ENSLAFG00000028984	-	88	52.222	ENSDARG00000026098	si:dkey-13a21.4	88	52.222	Danio_rerio
ENSLAFG00000028984	-	100	73.077	ENSDNOG00000043559	-	100	73.077	Dasypus_novemcinctus
ENSLAFG00000028984	-	86	54.444	ENSFHEG00000002502	si:dkey-13a21.4	88	54.444	Fundulus_heteroclitus
ENSLAFG00000028984	-	83	55.556	ENSGAFG00000020102	si:dkey-13a21.4	84	55.556	Gambusia_affinis
ENSLAFG00000028984	-	85	53.714	ENSHBUG00000014023	si:dkey-13a21.4	85	53.714	Haplochromis_burtoni
ENSLAFG00000028984	-	81	54.491	ENSKMAG00000021039	si:dkey-13a21.4	70	54.491	Kryptolebias_marmoratus
ENSLAFG00000028984	-	86	55.056	ENSLBEG00000018180	si:dkey-13a21.4	88	55.056	Labrus_bergylta
ENSLAFG00000028984	-	100	50.000	ENSLOCG00000014749	si:dkey-13a21.4	100	50.000	Lepisosteus_oculatus
ENSLAFG00000028984	-	86	53.672	ENSMAMG00000021095	si:dkey-13a21.4	87	53.672	Mastacembelus_armatus
ENSLAFG00000028984	-	85	53.143	ENSMZEG00005010220	si:dkey-13a21.4	85	53.143	Maylandia_zebra
ENSLAFG00000028984	-	85	53.714	ENSNBRG00000023214	si:dkey-13a21.4	85	53.714	Neolamprologus_brichardi
ENSLAFG00000028984	-	85	52.571	ENSONIG00000020296	si:dkey-13a21.4	86	52.571	Oreochromis_niloticus
ENSLAFG00000028984	-	83	56.725	ENSORLG00000025098	si:dkey-13a21.4	84	56.725	Oryzias_latipes
ENSLAFG00000028984	-	83	56.725	ENSORLG00020019465	si:dkey-13a21.4	84	56.725	Oryzias_latipes_hni
ENSLAFG00000028984	-	83	56.725	ENSORLG00015015121	si:dkey-13a21.4	84	56.725	Oryzias_latipes_hsok
ENSLAFG00000028984	-	86	53.107	ENSPKIG00000008691	si:dkey-13a21.4	88	54.070	Paramormyrops_kingsleyae
ENSLAFG00000028984	-	80	57.576	ENSPMGG00000023170	si:dkey-13a21.4	81	56.725	Periophthalmus_magnuspinnatus
ENSLAFG00000028984	-	83	55.556	ENSPFOG00000015409	si:dkey-13a21.4	84	55.556	Poecilia_formosa
ENSLAFG00000028984	-	83	55.556	ENSPLAG00000019688	si:dkey-13a21.4	84	55.556	Poecilia_latipinna
ENSLAFG00000028984	-	83	55.556	ENSPMEG00000019159	si:dkey-13a21.4	84	55.556	Poecilia_mexicana
ENSLAFG00000028984	-	83	55.556	ENSPREG00000022241	si:dkey-13a21.4	84	55.556	Poecilia_reticulata
ENSLAFG00000028984	-	85	53.143	ENSPNYG00000018613	si:dkey-13a21.4	85	53.143	Pundamilia_nyererei
ENSLAFG00000028984	-	100	43.333	YML001W	YPT7	100	43.333	Saccharomyces_cerevisiae
ENSLAFG00000028984	-	89	54.839	ENSSFOG00015009566	si:dkey-13a21.4	88	55.307	Scleropages_formosus
ENSLAFG00000028984	-	86	53.672	ENSSMAG00000013945	si:dkey-13a21.4	86	53.672	Scophthalmus_maximus
ENSLAFG00000028984	-	85	54.286	ENSSDUG00000019738	si:dkey-13a21.4	86	54.286	Seriola_dumerili
ENSLAFG00000028984	-	83	54.386	ENSSLDG00000011597	si:dkey-13a21.4	84	54.386	Seriola_lalandi_dorsalis
ENSLAFG00000028984	-	96	55.051	ENSXETG00000014257	mgc75872	97	55.051	Xenopus_tropicalis