EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000029002 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 91373 bases
Position: chrscaffold_1:104028667-104120039
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000028138	MMR_HSR1	PF01926.23	3.4e-15	1	2
ENSLAFP00000028138	MMR_HSR1	PF01926.23	3.4e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000036994	-	3789	-	ENSLAFP00000028138	1263 (aa)	-	G3UJX9

Gene Model

Click here to download ENSLAFG00000029002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000029002's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000029002	-	53	63.295	ENSLAFG00000027033	-	51	63.295
ENSLAFG00000029002	-	50	44.785	ENSLAFG00000031042	-	82	44.785

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000029002	-	51	71.557	ENSAMEG00000018886	-	81	71.557	Ailuropoda_melanoleuca
ENSLAFG00000029002	-	53	59.064	ENSAMEG00000001281	-	81	59.064	Ailuropoda_melanoleuca
ENSLAFG00000029002	-	51	38.177	ENSACIG00000014652	-	95	43.496	Amphilophus_citrinellus
ENSLAFG00000029002	-	50	46.624	ENSACAG00000004461	-	81	45.679	Anolis_carolinensis
ENSLAFG00000029002	-	51	60.933	ENSBTAG00000015727	IFI47	81	60.933	Bos_taurus
ENSLAFG00000029002	-	50	48.466	ENSCAFG00000000498	-	77	48.466	Canis_familiaris
ENSLAFG00000029002	-	68	61.224	ENSCAFG00000028829	-	86	61.224	Canis_familiaris
ENSLAFG00000029002	-	50	75.150	ENSCAFG00000000502	IFGGC1	80	75.150	Canis_familiaris
ENSLAFG00000029002	-	65	63.158	ENSCAFG00020002229	-	83	63.158	Canis_lupus_dingo
ENSLAFG00000029002	-	50	75.150	ENSCAFG00020002398	-	80	75.150	Canis_lupus_dingo
ENSLAFG00000029002	-	54	58.754	ENSCHIG00000006767	-	88	58.754	Capra_hircus
ENSLAFG00000029002	-	53	53.561	ENSCAPG00000016904	-	86	53.561	Cavia_aperea
ENSLAFG00000029002	-	53	62.155	ENSCAPG00000016931	-	86	62.155	Cavia_aperea
ENSLAFG00000029002	-	51	63.772	ENSCPOG00000023450	-	80	63.772	Cavia_porcellus
ENSLAFG00000029002	-	50	59.517	ENSCPOG00000034856	-	79	59.517	Cavia_porcellus
ENSLAFG00000029002	-	54	61.905	ENSCPOG00000037647	-	89	61.905	Cavia_porcellus
ENSLAFG00000029002	-	53	62.707	ENSCPOG00000034918	-	87	62.707	Cavia_porcellus
ENSLAFG00000029002	-	53	62.707	ENSCPOG00000037129	-	87	62.707	Cavia_porcellus
ENSLAFG00000029002	-	54	68.263	ENSCLAG00000017958	-	88	68.263	Chinchilla_lanigera
ENSLAFG00000029002	-	52	68.513	ENSCLAG00000017791	-	80	68.513	Chinchilla_lanigera
ENSLAFG00000029002	-	54	37.028	ENSCPBG00000002066	-	88	37.028	Chrysemys_picta_bellii
ENSLAFG00000029002	-	51	45.370	ENSCPBG00000022413	-	76	45.370	Chrysemys_picta_bellii
ENSLAFG00000029002	-	53	39.167	ENSCPBG00000016826	-	82	39.167	Chrysemys_picta_bellii
ENSLAFG00000029002	-	51	69.970	ENSCGRG00001001682	Ifi47	81	69.970	Cricetulus_griseus_chok1gshd
ENSLAFG00000029002	-	50	50.309	ENSCGRG00001022428	-	76	50.309	Cricetulus_griseus_chok1gshd
ENSLAFG00000029002	-	75	56.187	ENSCGRG00001015722	Igtp	87	56.187	Cricetulus_griseus_chok1gshd
ENSLAFG00000029002	-	75	55.518	ENSCGRG00000003709	Igtp	87	55.518	Cricetulus_griseus_crigri
ENSLAFG00000029002	-	50	50.309	ENSCGRG00000008370	-	70	50.309	Cricetulus_griseus_crigri
ENSLAFG00000029002	-	51	66.061	ENSDNOG00000045232	-	82	66.061	Dasypus_novemcinctus
ENSLAFG00000029002	-	51	41.049	ENSDNOG00000047478	-	83	41.049	Dasypus_novemcinctus
ENSLAFG00000029002	-	52	69.162	ENSDNOG00000046683	-	88	69.162	Dasypus_novemcinctus
ENSLAFG00000029002	-	50	42.361	ENSELUG00000003864	irgf3	80	43.072	Esox_lucius
ENSLAFG00000029002	-	50	63.174	ENSFDAG00000010234	-	81	63.174	Fukomys_damarensis
ENSLAFG00000029002	-	52	47.937	ENSFDAG00000012257	-	73	47.937	Fukomys_damarensis
ENSLAFG00000029002	-	50	39.048	ENSGAGG00000015288	-	78	39.048	Gopherus_agassizii
ENSLAFG00000029002	-	50	42.675	ENSGAGG00000011616	-	77	42.675	Gopherus_agassizii
ENSLAFG00000029002	-	53	56.686	ENSHGLG00000013108	-	82	56.686	Heterocephalus_glaber_female
ENSLAFG00000029002	-	53	56.395	ENSHGLG00100006680	-	82	56.395	Heterocephalus_glaber_male
ENSLAFG00000029002	-	51	67.365	ENSHGLG00100020304	-	80	67.365	Heterocephalus_glaber_male
ENSLAFG00000029002	-	51	74.850	ENSSTOG00000020635	-	80	74.850	Ictidomys_tridecemlineatus
ENSLAFG00000029002	-	50	50.476	ENSJJAG00000023378	-	84	53.211	Jaculus_jaculus
ENSLAFG00000029002	-	52	43.492	ENSLACG00000016344	-	93	43.492	Latimeria_chalumnae
ENSLAFG00000029002	-	51	69.369	ENSMAUG00000006870	Ifi47	83	69.369	Mesocricetus_auratus
ENSLAFG00000029002	-	83	53.251	ENSMAUG00000010911	Igtp	95	53.251	Mesocricetus_auratus
ENSLAFG00000029002	-	50	46.667	ENSMICG00000046828	-	82	46.667	Microcebus_murinus
ENSLAFG00000029002	-	51	50.476	ENSMICG00000045819	-	83	50.476	Microcebus_murinus
ENSLAFG00000029002	-	53	55.233	ENSMOCG00000009734	Irgm1	83	55.233	Microtus_ochrogaster
ENSLAFG00000029002	-	72	51.765	ENSMOCG00000014171	Igtp	81	51.765	Microtus_ochrogaster
ENSLAFG00000029002	-	64	52.812	ENSMOCG00000012064	Irgm2	84	52.812	Microtus_ochrogaster
ENSLAFG00000029002	-	51	48.830	ENSMODG00000013291	-	83	48.830	Monodelphis_domestica
ENSLAFG00000029002	-	50	45.253	MGP_CAROLIEiJ_G0022302	Gm4951	80	45.253	Mus_caroli
ENSLAFG00000029002	-	53	57.681	MGP_CAROLIEiJ_G0016256	Irgm1	100	57.534	Mus_caroli
ENSLAFG00000029002	-	61	54.455	MGP_CAROLIEiJ_G0016388	-	72	54.455	Mus_caroli
ENSLAFG00000029002	-	50	45.397	MGP_CAROLIEiJ_G0022303	Iigp1	89	45.397	Mus_caroli
ENSLAFG00000029002	-	51	66.465	MGP_CAROLIEiJ_G0016261	Ifi47	80	66.465	Mus_caroli
ENSLAFG00000029002	-	51	67.372	ENSMUSG00000078920	Ifi47	83	71.250	Mus_musculus
ENSLAFG00000029002	-	53	57.971	ENSMUSG00000046879	Irgm1	84	58.631	Mus_musculus
ENSLAFG00000029002	-	50	48.494	ENSMUSG00000069892	9930111J21Rik2	77	48.494	Mus_musculus
ENSLAFG00000029002	-	50	48.795	ENSMUSG00000058163	Gm5431	77	48.795	Mus_musculus
ENSLAFG00000029002	-	76	53.746	ENSMUSG00000078853	Igtp	95	50.712	Mus_musculus
ENSLAFG00000029002	-	63	53.000	ENSMUSG00000069874	Irgm2	86	48.295	Mus_musculus
ENSLAFG00000029002	-	50	50.000	ENSMUSG00000048852	Gm12185	77	50.000	Mus_musculus
ENSLAFG00000029002	-	50	43.987	ENSMUSG00000073555	Gm4951	82	43.987	Mus_musculus
ENSLAFG00000029002	-	51	66.467	MGP_PahariEiJ_G0017394	Ifi47	80	66.467	Mus_pahari
ENSLAFG00000029002	-	53	57.681	MGP_PahariEiJ_G0017392	Irgm1	100	57.534	Mus_pahari
ENSLAFG00000029002	-	61	52.941	MGP_PahariEiJ_G0017523	-	78	52.941	Mus_pahari
ENSLAFG00000029002	-	53	57.681	MGP_SPRETEiJ_G0017097	Irgm1	100	58.219	Mus_spretus
ENSLAFG00000029002	-	51	67.372	MGP_SPRETEiJ_G0017105	Ifi47	80	67.372	Mus_spretus
ENSLAFG00000029002	-	84	51.143	MGP_SPRETEiJ_G0017229	Igtp	95	51.143	Mus_spretus
ENSLAFG00000029002	-	61	54.000	MGP_SPRETEiJ_G0017230	Irgm2	79	54.000	Mus_spretus
ENSLAFG00000029002	-	52	51.198	ENSMPUG00000001104	-	86	51.198	Mustela_putorius_furo
ENSLAFG00000029002	-	50	59.150	ENSMPUG00000000575	-	79	59.150	Mustela_putorius_furo
ENSLAFG00000029002	-	51	71.257	ENSNGAG00000023999	Ifi47	80	71.257	Nannospalax_galili
ENSLAFG00000029002	-	68	52.201	ENSNGAG00000017823	-	78	52.201	Nannospalax_galili
ENSLAFG00000029002	-	52	63.988	ENSNGAG00000013043	Irgm1	84	63.988	Nannospalax_galili
ENSLAFG00000029002	-	50	52.308	ENSNGAG00000021829	-	78	52.308	Nannospalax_galili
ENSLAFG00000029002	-	51	49.697	ENSNGAG00000021197	-	94	46.615	Nannospalax_galili
ENSLAFG00000029002	-	52	56.598	ENSPEMG00000018645	Irgm1	82	56.598	Peromyscus_maniculatus_bairdii
ENSLAFG00000029002	-	50	45.714	ENSPEMG00000011957	-	81	45.714	Peromyscus_maniculatus_bairdii
ENSLAFG00000029002	-	68	52.336	ENSPEMG00000022636	Irgm2	78	52.336	Peromyscus_maniculatus_bairdii
ENSLAFG00000029002	-	50	54.079	ENSPCIG00000025896	-	80	54.079	Phascolarctos_cinereus
ENSLAFG00000029002	-	52	47.706	ENSPCIG00000025897	-	87	47.706	Phascolarctos_cinereus
ENSLAFG00000029002	-	50	38.679	ENSPNYG00000001105	-	85	38.291	Pundamilia_nyererei
ENSLAFG00000029002	-	50	33.333	ENSPNAG00000028650	-	79	37.624	Pygocentrus_nattereri
ENSLAFG00000029002	-	52	44.762	ENSRNOG00000038957	RGD1305184	86	44.762	Rattus_norvegicus
ENSLAFG00000029002	-	99	40.691	ENSRNOG00000027008	Igtp	90	40.613	Rattus_norvegicus
ENSLAFG00000029002	-	51	66.168	ENSRNOG00000002470	Ifi47	80	66.168	Rattus_norvegicus
ENSLAFG00000029002	-	50	48.571	ENSRNOG00000038960	RGD1309362	80	48.571	Rattus_norvegicus
ENSLAFG00000029002	-	50	48.889	ENSRNOG00000048302	LOC100910979	89	48.889	Rattus_norvegicus
ENSLAFG00000029002	-	50	48.889	ENSRNOG00000019542	LOC100910979	80	48.889	Rattus_norvegicus
ENSLAFG00000029002	-	50	48.571	ENSRNOG00000049893	LOC100910934	80	48.571	Rattus_norvegicus
ENSLAFG00000029002	-	53	59.130	ENSRNOG00000031138	Irgm	83	59.130	Rattus_norvegicus
ENSLAFG00000029002	-	50	44.308	ENSSPUG00000015920	-	87	44.308	Sphenodon_punctatus
ENSLAFG00000029002	-	50	41.026	ENSSPAG00000020347	-	82	42.424	Stegastes_partitus
ENSLAFG00000029002	-	51	71.557	ENSUAMG00000013638	-	87	71.557	Ursus_americanus
ENSLAFG00000029002	-	50	50.307	ENSUAMG00000013623	-	80	50.307	Ursus_americanus
ENSLAFG00000029002	-	51	72.156	ENSUAMG00000012493	-	79	72.156	Ursus_americanus
ENSLAFG00000029002	-	52	59.821	ENSUMAG00000009713	-	84	59.821	Ursus_maritimus
ENSLAFG00000029002	-	51	73.054	ENSUMAG00000009719	-	79	73.054	Ursus_maritimus
ENSLAFG00000029002	-	51	71.557	ENSUMAG00000025020	-	80	71.557	Ursus_maritimus
ENSLAFG00000029002	-	50	49.697	ENSVVUG00000026929	-	75	49.697	Vulpes_vulpes
ENSLAFG00000029002	-	51	76.347	ENSVVUG00000026930	-	80	76.347	Vulpes_vulpes
ENSLAFG00000029002	-	52	75.449	ENSVVUG00000002750	-	78	75.449	Vulpes_vulpes
ENSLAFG00000029002	-	67	61.631	ENSVVUG00000002784	-	85	61.631	Vulpes_vulpes