EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000030499 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 2198 bases
Position: chrscaffold_61:9571465-9573662
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000018796	RF-1	PF00472.20	1.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000033698	-	1257	-	ENSLAFP00000018796	418 (aa)	-	G3TT88
ENSLAFT00000026260	-	450	-	ENSLAFP00000019724	150 (aa)	-	G3TVW6

Gene Model

Click here to download ENSLAFG00000030499's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000030499's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000030499	-	83	35.677	ENSLAFG00000004022	MTRF1L	98	35.677
ENSLAFG00000030499	-	99	76.244	ENSLAFG00000022177	-	99	76.244

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000030499	-	99	71.719	ENSG00000120662	MTRF1	99	71.719	Homo_sapiens
ENSLAFG00000030499	-	76	45.299	ENSAPOG00000010181	mtrf1	86	45.299	Acanthochromis_polyacanthus
ENSLAFG00000030499	-	99	70.588	ENSAMEG00000008696	MTRF1	99	70.588	Ailuropoda_melanoleuca
ENSLAFG00000030499	-	53	52.321	ENSACIG00000001495	mtrf1	96	52.321	Amphilophus_citrinellus
ENSLAFG00000030499	-	85	43.734	ENSAOCG00000002832	mtrf1	87	43.734	Amphiprion_ocellaris
ENSLAFG00000030499	-	85	43.041	ENSAPEG00000014844	mtrf1	87	43.041	Amphiprion_percula
ENSLAFG00000030499	-	77	44.193	ENSATEG00000017403	mtrf1	84	44.193	Anabas_testudineus
ENSLAFG00000030499	-	98	48.636	ENSAPLG00000009317	MTRF1	99	50.000	Anas_platyrhynchos
ENSLAFG00000030499	-	86	50.900	ENSACAG00000000897	MTRF1	88	50.900	Anolis_carolinensis
ENSLAFG00000030499	-	86	64.491	ENSANAG00000025310	-	97	67.598	Aotus_nancymaae
ENSLAFG00000030499	-	99	66.210	ENSANAG00000023063	-	99	66.210	Aotus_nancymaae
ENSLAFG00000030499	-	83	43.799	ENSACLG00000023945	mtrf1	84	43.799	Astatotilapia_calliptera
ENSLAFG00000030499	-	99	69.683	ENSBTAG00000012260	MTRF1	99	69.683	Bos_taurus
ENSLAFG00000030499	-	99	68.778	ENSCJAG00000017739	MTRF1	100	71.264	Callithrix_jacchus
ENSLAFG00000030499	-	99	70.429	ENSCAFG00000004795	MTRF1	99	70.429	Canis_familiaris
ENSLAFG00000030499	-	99	70.429	ENSCAFG00020018178	MTRF1	99	70.429	Canis_lupus_dingo
ENSLAFG00000030499	-	99	68.326	ENSCHIG00000011810	MTRF1	99	68.326	Capra_hircus
ENSLAFG00000030499	-	99	70.136	ENSTSYG00000006976	MTRF1	99	70.136	Carlito_syrichta
ENSLAFG00000030499	-	96	68.981	ENSCAPG00000013163	MTRF1	100	68.981	Cavia_aperea
ENSLAFG00000030499	-	99	68.552	ENSCPOG00000005264	MTRF1	99	68.552	Cavia_porcellus
ENSLAFG00000030499	-	99	69.231	ENSCCAG00000035116	MTRF1	99	69.231	Cebus_capucinus
ENSLAFG00000030499	-	99	71.493	ENSCATG00000009909	MTRF1	99	71.493	Cercocebus_atys
ENSLAFG00000030499	-	99	68.326	ENSCLAG00000000582	MTRF1	99	68.326	Chinchilla_lanigera
ENSLAFG00000030499	-	99	71.493	ENSCSAG00000017835	MTRF1	99	71.493	Chlorocebus_sabaeus
ENSLAFG00000030499	-	90	63.457	ENSCHOG00000011915	-	99	63.457	Choloepus_hoffmanni
ENSLAFG00000030499	-	98	50.113	ENSCPBG00000007969	MTRF1	98	51.701	Chrysemys_picta_bellii
ENSLAFG00000030499	-	99	70.814	ENSCANG00000040353	MTRF1	99	70.814	Colobus_angolensis_palliatus
ENSLAFG00000030499	-	99	65.158	ENSCGRG00001003065	Mtrf1	99	65.158	Cricetulus_griseus_chok1gshd
ENSLAFG00000030499	-	99	65.158	ENSCGRG00000002570	Mtrf1	99	65.158	Cricetulus_griseus_crigri
ENSLAFG00000030499	-	87	42.677	ENSCSEG00000005667	mtrf1	89	42.677	Cynoglossus_semilaevis
ENSLAFG00000030499	-	89	40.299	ENSCVAG00000021729	mtrf1	93	40.299	Cyprinodon_variegatus
ENSLAFG00000030499	-	52	45.690	ENSDARG00000033579	mtrf1	99	45.690	Danio_rerio
ENSLAFG00000030499	-	100	71.460	ENSDNOG00000034196	MTRF1	99	72.727	Dasypus_novemcinctus
ENSLAFG00000030499	-	99	68.934	ENSDORG00000016429	Mtrf1	99	68.934	Dipodomys_ordii
ENSLAFG00000030499	-	99	71.267	ENSETEG00000014811	MTRF1	99	71.267	Echinops_telfairi
ENSLAFG00000030499	-	52	44.017	ENSEBUG00000000778	mtrf1	96	44.017	Eptatretus_burgeri
ENSLAFG00000030499	-	99	71.267	ENSEASG00005015715	MTRF1	99	71.267	Equus_asinus_asinus
ENSLAFG00000030499	-	99	69.866	ENSECAG00000014389	MTRF1	98	69.866	Equus_caballus
ENSLAFG00000030499	-	99	52.596	ENSEEUG00000004450	-	99	53.153	Erinaceus_europaeus
ENSLAFG00000030499	-	84	41.470	ENSELUG00000006544	mtrf1	88	41.470	Esox_lucius
ENSLAFG00000030499	-	99	69.457	ENSFCAG00000031635	MTRF1	99	69.457	Felis_catus
ENSLAFG00000030499	-	88	51.880	ENSFALG00000008036	MTRF1	99	51.880	Ficedula_albicollis
ENSLAFG00000030499	-	99	67.195	ENSFDAG00000017881	MTRF1	99	67.195	Fukomys_damarensis
ENSLAFG00000030499	-	85	42.448	ENSFHEG00000019043	mtrf1	88	42.448	Fundulus_heteroclitus
ENSLAFG00000030499	-	83	39.947	ENSGMOG00000008608	mtrf1	99	39.947	Gadus_morhua
ENSLAFG00000030499	-	85	53.506	ENSGALG00000016951	MTRF1	84	55.065	Gallus_gallus
ENSLAFG00000030499	-	84	43.045	ENSGAFG00000007093	mtrf1	86	43.045	Gambusia_affinis
ENSLAFG00000030499	-	82	43.122	ENSGACG00000013728	mtrf1	98	43.122	Gasterosteus_aculeatus
ENSLAFG00000030499	-	68	52.716	ENSGAGG00000025696	MTRF1	99	54.952	Gopherus_agassizii
ENSLAFG00000030499	-	99	71.267	ENSGGOG00000002529	MTRF1	99	71.267	Gorilla_gorilla
ENSLAFG00000030499	-	99	68.552	ENSHGLG00000003210	MTRF1	99	68.552	Heterocephalus_glaber_female
ENSLAFG00000030499	-	99	68.552	ENSHGLG00100011843	MTRF1	99	68.552	Heterocephalus_glaber_male
ENSLAFG00000030499	-	86	41.085	ENSHCOG00000009449	mtrf1	88	41.085	Hippocampus_comes
ENSLAFG00000030499	-	99	71.493	ENSSTOG00000021682	MTRF1	99	71.493	Ictidomys_tridecemlineatus
ENSLAFG00000030499	-	99	69.457	ENSJJAG00000017590	Mtrf1	99	69.457	Jaculus_jaculus
ENSLAFG00000030499	-	78	44.693	ENSKMAG00000003231	mtrf1	86	42.746	Kryptolebias_marmoratus
ENSLAFG00000030499	-	51	51.304	ENSLBEG00000027169	-	92	51.304	Labrus_bergylta
ENSLAFG00000030499	-	51	51.304	ENSLBEG00000023151	mtrf1	92	51.304	Labrus_bergylta
ENSLAFG00000030499	-	86	53.590	ENSLACG00000010582	MTRF1	87	53.590	Latimeria_chalumnae
ENSLAFG00000030499	-	89	45.636	ENSLOCG00000005937	MTRF1	90	45.636	Lepisosteus_oculatus
ENSLAFG00000030499	-	99	71.493	ENSMFAG00000037972	MTRF1	99	71.493	Macaca_fascicularis
ENSLAFG00000030499	-	99	71.719	ENSMNEG00000035487	MTRF1	99	71.719	Macaca_nemestrina
ENSLAFG00000030499	-	99	71.946	ENSMLEG00000033582	MTRF1	99	71.946	Mandrillus_leucophaeus
ENSLAFG00000030499	-	82	44.032	ENSMAMG00000022048	mtrf1	84	44.032	Mastacembelus_armatus
ENSLAFG00000030499	-	83	43.799	ENSMZEG00005017922	mtrf1	84	43.799	Maylandia_zebra
ENSLAFG00000030499	-	85	53.125	ENSMGAG00000014971	MTRF1	92	54.688	Meleagris_gallopavo
ENSLAFG00000030499	-	99	66.516	ENSMAUG00000011661	Mtrf1	99	66.516	Mesocricetus_auratus
ENSLAFG00000030499	-	99	71.719	ENSMICG00000033131	MTRF1	99	71.719	Microcebus_murinus
ENSLAFG00000030499	-	99	64.480	ENSMOCG00000011945	Mtrf1	99	64.480	Microtus_ochrogaster
ENSLAFG00000030499	-	50	46.696	ENSMMOG00000013394	mtrf1	93	46.696	Mola_mola
ENSLAFG00000030499	-	99	58.014	ENSMODG00000014772	MTRF1	99	58.014	Monodelphis_domestica
ENSLAFG00000030499	-	83	43.008	ENSMALG00000013274	mtrf1	87	43.008	Monopterus_albus
ENSLAFG00000030499	-	99	64.932	MGP_CAROLIEiJ_G0019539	Mtrf1	98	64.932	Mus_caroli
ENSLAFG00000030499	-	99	66.742	ENSMUSG00000022022	Mtrf1	99	66.742	Mus_musculus
ENSLAFG00000030499	-	99	64.706	MGP_PahariEiJ_G0030557	Mtrf1	99	64.706	Mus_pahari
ENSLAFG00000030499	-	99	65.837	MGP_SPRETEiJ_G0020435	Mtrf1	99	65.837	Mus_spretus
ENSLAFG00000030499	-	98	70.455	ENSMPUG00000001874	MTRF1	99	70.455	Mustela_putorius_furo
ENSLAFG00000030499	-	99	71.493	ENSMLUG00000017237	MTRF1	99	71.493	Myotis_lucifugus
ENSLAFG00000030499	-	99	69.683	ENSNGAG00000014460	Mtrf1	99	69.683	Nannospalax_galili
ENSLAFG00000030499	-	50	52.423	ENSNBRG00000004634	mtrf1	96	52.423	Neolamprologus_brichardi
ENSLAFG00000030499	-	99	71.041	ENSNLEG00000001236	MTRF1	99	71.041	Nomascus_leucogenys
ENSLAFG00000030499	-	99	54.260	ENSMEUG00000001846	MTRF1	99	54.260	Notamacropus_eugenii
ENSLAFG00000030499	-	61	71.795	ENSOPRG00000006450	-	81	71.795	Ochotona_princeps
ENSLAFG00000030499	-	99	67.421	ENSODEG00000005782	MTRF1	99	67.421	Octodon_degus
ENSLAFG00000030499	-	83	44.063	ENSONIG00000012476	mtrf1	98	44.063	Oreochromis_niloticus
ENSLAFG00000030499	-	68	55.484	ENSOANG00000003383	-	98	55.484	Ornithorhynchus_anatinus
ENSLAFG00000030499	-	99	69.910	ENSOCUG00000025207	MTRF1	99	69.910	Oryctolagus_cuniculus
ENSLAFG00000030499	-	84	43.603	ENSORLG00000003225	mtrf1	87	43.603	Oryzias_latipes
ENSLAFG00000030499	-	84	43.342	ENSORLG00020021048	mtrf1	86	43.342	Oryzias_latipes_hni
ENSLAFG00000030499	-	84	43.864	ENSORLG00015020957	mtrf1	87	43.864	Oryzias_latipes_hsok
ENSLAFG00000030499	-	83	43.684	ENSOMEG00000002022	mtrf1	87	43.684	Oryzias_melastigma
ENSLAFG00000030499	-	71	61.682	ENSOGAG00000026411	-	100	61.682	Otolemur_garnettii
ENSLAFG00000030499	-	99	65.158	ENSOGAG00000009719	-	99	65.158	Otolemur_garnettii
ENSLAFG00000030499	-	99	68.326	ENSOARG00000006994	MTRF1	99	68.326	Ovis_aries
ENSLAFG00000030499	-	99	71.719	ENSPPAG00000000050	MTRF1	99	71.719	Pan_paniscus
ENSLAFG00000030499	-	99	69.910	ENSPPRG00000009511	MTRF1	99	69.910	Panthera_pardus
ENSLAFG00000030499	-	99	69.457	ENSPTIG00000006673	MTRF1	99	69.457	Panthera_tigris_altaica
ENSLAFG00000030499	-	99	71.719	ENSPTRG00000005815	MTRF1	99	71.719	Pan_troglodytes
ENSLAFG00000030499	-	99	71.719	ENSPANG00000010809	MTRF1	99	71.719	Papio_anubis
ENSLAFG00000030499	-	83	42.744	ENSPKIG00000015711	mtrf1	89	42.744	Paramormyrops_kingsleyae
ENSLAFG00000030499	-	97	49.660	ENSPSIG00000004773	MTRF1	97	51.247	Pelodiscus_sinensis
ENSLAFG00000030499	-	52	50.862	ENSPMGG00000006724	mtrf1	95	50.862	Periophthalmus_magnuspinnatus
ENSLAFG00000030499	-	99	65.914	ENSPEMG00000020982	Mtrf1	99	65.914	Peromyscus_maniculatus_bairdii
ENSLAFG00000030499	-	74	41.908	ENSPMAG00000009849	mtrf1	99	41.908	Petromyzon_marinus
ENSLAFG00000030499	-	99	54.853	ENSPCIG00000012940	MTRF1	99	56.659	Phascolarctos_cinereus
ENSLAFG00000030499	-	84	42.782	ENSPFOG00000000254	mtrf1	87	42.782	Poecilia_formosa
ENSLAFG00000030499	-	84	43.045	ENSPLAG00000014280	mtrf1	87	43.045	Poecilia_latipinna
ENSLAFG00000030499	-	84	42.782	ENSPMEG00000023245	mtrf1	87	42.782	Poecilia_mexicana
ENSLAFG00000030499	-	51	48.052	ENSPREG00000018619	mtrf1	95	48.052	Poecilia_reticulata
ENSLAFG00000030499	-	99	70.362	ENSPPYG00000005313	MTRF1	99	70.362	Pongo_abelii
ENSLAFG00000030499	-	99	71.719	ENSPCOG00000018133	MTRF1	99	71.719	Propithecus_coquereli
ENSLAFG00000030499	-	99	70.136	ENSPVAG00000008573	MTRF1	99	70.136	Pteropus_vampyrus
ENSLAFG00000030499	-	50	51.982	ENSPNYG00000004357	mtrf1	92	51.982	Pundamilia_nyererei
ENSLAFG00000030499	-	78	42.778	ENSPNAG00000010682	mtrf1	89	41.282	Pygocentrus_nattereri
ENSLAFG00000030499	-	99	65.237	ENSRNOG00000047106	Mtrf1	93	72.566	Rattus_norvegicus
ENSLAFG00000030499	-	99	71.267	ENSRBIG00000007069	MTRF1	99	71.267	Rhinopithecus_bieti
ENSLAFG00000030499	-	99	71.267	ENSRROG00000035345	MTRF1	99	71.267	Rhinopithecus_roxellana
ENSLAFG00000030499	-	83	70.370	ENSSBOG00000004572	MTRF1	100	70.370	Saimiri_boliviensis_boliviensis
ENSLAFG00000030499	-	90	56.265	ENSSHAG00000018109	MTRF1	99	57.843	Sarcophilus_harrisii
ENSLAFG00000030499	-	84	44.675	ENSSFOG00015006191	mtrf1	86	44.675	Scleropages_formosus
ENSLAFG00000030499	-	86	43.702	ENSSMAG00000015740	mtrf1	87	43.702	Scophthalmus_maximus
ENSLAFG00000030499	-	86	45.128	ENSSDUG00000022608	mtrf1	76	45.128	Seriola_dumerili
ENSLAFG00000030499	-	86	44.872	ENSSLDG00000013584	mtrf1	76	44.872	Seriola_lalandi_dorsalis
ENSLAFG00000030499	-	99	65.986	ENSSARG00000002306	MTRF1	99	65.986	Sorex_araneus
ENSLAFG00000030499	-	52	57.082	ENSSPUG00000007354	MTRF1	96	57.082	Sphenodon_punctatus
ENSLAFG00000030499	-	85	44.473	ENSSPAG00000000881	mtrf1	87	44.473	Stegastes_partitus
ENSLAFG00000030499	-	99	68.100	ENSSSCG00000009436	MTRF1	99	68.100	Sus_scrofa
ENSLAFG00000030499	-	85	52.865	ENSTGUG00000012422	MTRF1	93	54.427	Taeniopygia_guttata
ENSLAFG00000030499	-	83	42.895	ENSTRUG00000000396	mtrf1	85	42.895	Takifugu_rubripes
ENSLAFG00000030499	-	81	43.902	ENSTNIG00000017149	-	98	43.651	Tetraodon_nigroviridis
ENSLAFG00000030499	-	52	59.664	ENSTBEG00000004696	-	99	59.664	Tupaia_belangeri
ENSLAFG00000030499	-	99	70.588	ENSTTRG00000010370	MTRF1	99	70.588	Tursiops_truncatus
ENSLAFG00000030499	-	99	71.041	ENSUMAG00000014772	MTRF1	99	71.041	Ursus_maritimus
ENSLAFG00000030499	-	99	70.682	ENSVPAG00000002565	MTRF1	99	70.682	Vicugna_pacos
ENSLAFG00000030499	-	99	70.203	ENSVVUG00000028755	MTRF1	99	70.203	Vulpes_vulpes
ENSLAFG00000030499	-	84	50.526	ENSXETG00000018904	mtrf1	98	50.526	Xenopus_tropicalis
ENSLAFG00000030499	-	84	42.257	ENSXMAG00000009853	mtrf1	86	42.257	Xiphophorus_maculatus