EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000030814 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 6643 bases
Position: chrscaffold_34:3422485-3429127
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000023547	SYF2	PF08231.12	2.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000027197	-	546	-	ENSLAFP00000023547	182 (aa)	-	G3U6T9

Gene Model

Click here to download ENSLAFG00000030814's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000030814's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000030814	-	100	64.674	ENSLAFG00000023150	-	75	64.674

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000030814	-	100	64.674	ENSG00000117614	SYF2	75	64.674	Homo_sapiens
ENSLAFG00000030814	-	100	55.978	ENSAPOG00000001174	syf2	77	55.978	Acanthochromis_polyacanthus
ENSLAFG00000030814	-	100	64.674	ENSAMEG00000010115	-	75	64.674	Ailuropoda_melanoleuca
ENSLAFG00000030814	-	92	65.089	ENSAMEG00000010134	-	86	65.089	Ailuropoda_melanoleuca
ENSLAFG00000030814	-	100	54.348	ENSACIG00000023688	syf2	73	54.348	Amphilophus_citrinellus
ENSLAFG00000030814	-	100	56.522	ENSAOCG00000022046	syf2	78	56.522	Amphiprion_ocellaris
ENSLAFG00000030814	-	100	56.522	ENSAOCG00000010912	syf2	57	56.522	Amphiprion_ocellaris
ENSLAFG00000030814	-	100	56.522	ENSAPEG00000018858	syf2	71	56.522	Amphiprion_percula
ENSLAFG00000030814	-	100	55.435	ENSATEG00000007745	syf2	77	55.435	Anabas_testudineus
ENSLAFG00000030814	-	95	61.798	ENSAPLG00000016435	SYF2	87	61.798	Anas_platyrhynchos
ENSLAFG00000030814	-	74	50.735	ENSACAG00000026777	-	71	48.333	Anolis_carolinensis
ENSLAFG00000030814	-	97	58.427	ENSACAG00000013653	-	87	58.427	Anolis_carolinensis
ENSLAFG00000030814	-	100	65.217	ENSANAG00000032473	SYF2	75	65.217	Aotus_nancymaae
ENSLAFG00000030814	-	100	54.348	ENSACLG00000019916	syf2	77	54.348	Astatotilapia_calliptera
ENSLAFG00000030814	-	100	57.065	ENSAMXG00000004051	syf2	77	57.219	Astyanax_mexicanus
ENSLAFG00000030814	-	100	65.217	ENSBTAG00000001651	SYF2	78	65.217	Bos_taurus
ENSLAFG00000030814	-	95	37.079	WBGene00019402	syf-2	77	37.363	Caenorhabditis_elegans
ENSLAFG00000030814	-	100	65.217	ENSCJAG00000046570	SYF2	75	65.217	Callithrix_jacchus
ENSLAFG00000030814	-	99	59.890	ENSCAFG00000030331	-	79	59.890	Canis_familiaris
ENSLAFG00000030814	-	100	64.674	ENSCAFG00000012895	-	74	64.674	Canis_familiaris
ENSLAFG00000030814	-	84	55.195	ENSCAFG00020021094	-	65	58.871	Canis_lupus_dingo
ENSLAFG00000030814	-	100	64.674	ENSCAFG00020021091	-	74	64.674	Canis_lupus_dingo
ENSLAFG00000030814	-	100	65.217	ENSCHIG00000020874	SYF2	76	65.217	Capra_hircus
ENSLAFG00000030814	-	100	64.130	ENSTSYG00000005114	SYF2	75	64.130	Carlito_syrichta
ENSLAFG00000030814	-	94	64.740	ENSCAPG00000010006	SYF2	87	64.740	Cavia_aperea
ENSLAFG00000030814	-	100	64.674	ENSCPOG00000005326	SYF2	75	64.674	Cavia_porcellus
ENSLAFG00000030814	-	100	65.217	ENSCCAG00000022459	SYF2	75	65.217	Cebus_capucinus
ENSLAFG00000030814	-	100	65.217	ENSCATG00000026917	SYF2	75	65.217	Cercocebus_atys
ENSLAFG00000030814	-	100	64.674	ENSCLAG00000008474	SYF2	75	64.674	Chinchilla_lanigera
ENSLAFG00000030814	-	100	65.217	ENSCSAG00000000948	SYF2	75	65.217	Chlorocebus_sabaeus
ENSLAFG00000030814	-	69	65.625	ENSCHOG00000005273	-	78	65.625	Choloepus_hoffmanni
ENSLAFG00000030814	-	100	63.243	ENSCPBG00000025073	SYF2	74	63.243	Chrysemys_picta_bellii
ENSLAFG00000030814	-	100	37.634	ENSCING00000003017	-	77	37.634	Ciona_intestinalis
ENSLAFG00000030814	-	100	38.095	ENSCSAVG00000006627	-	84	38.095	Ciona_savignyi
ENSLAFG00000030814	-	100	55.978	ENSCANG00000037322	SYF2	71	55.978	Colobus_angolensis_palliatus
ENSLAFG00000030814	-	100	62.500	ENSCGRG00001020733	Syf2	76	62.500	Cricetulus_griseus_chok1gshd
ENSLAFG00000030814	-	92	62.722	ENSCGRG00000005095	Syf2	83	62.791	Cricetulus_griseus_crigri
ENSLAFG00000030814	-	100	51.087	ENSCSEG00000000117	syf2	77	51.087	Cynoglossus_semilaevis
ENSLAFG00000030814	-	100	53.804	ENSCVAG00000019543	syf2	77	53.804	Cyprinodon_variegatus
ENSLAFG00000030814	-	100	57.609	ENSDARG00000004706	syf2	77	57.609	Danio_rerio
ENSLAFG00000030814	-	100	64.130	ENSDNOG00000047605	SYF2	75	64.130	Dasypus_novemcinctus
ENSLAFG00000030814	-	100	64.130	ENSDORG00000001274	Syf2	75	64.130	Dipodomys_ordii
ENSLAFG00000030814	-	97	39.779	FBgn0033556	CG12343	80	38.674	Drosophila_melanogaster
ENSLAFG00000030814	-	63	75.000	ENSETEG00000015729	SYF2	51	75.000	Echinops_telfairi
ENSLAFG00000030814	-	93	41.176	ENSEBUG00000015402	syf2	81	41.176	Eptatretus_burgeri
ENSLAFG00000030814	-	100	65.761	ENSEASG00005004224	-	75	65.761	Equus_asinus_asinus
ENSLAFG00000030814	-	100	58.065	ENSEASG00005004232	-	75	58.065	Equus_asinus_asinus
ENSLAFG00000030814	-	100	65.761	ENSECAG00000012023	-	75	65.761	Equus_caballus
ENSLAFG00000030814	-	100	65.761	ENSECAG00000010440	-	76	65.761	Equus_caballus
ENSLAFG00000030814	-	81	63.333	ENSEEUG00000015084	SYF2	81	63.333	Erinaceus_europaeus
ENSLAFG00000030814	-	100	58.152	ENSELUG00000003465	syf2	77	58.152	Esox_lucius
ENSLAFG00000030814	-	100	65.217	ENSFCAG00000010324	-	63	65.217	Felis_catus
ENSLAFG00000030814	-	100	64.674	ENSFCAG00000043095	-	74	64.674	Felis_catus
ENSLAFG00000030814	-	97	59.669	ENSFALG00000000460	SYF2	74	58.824	Ficedula_albicollis
ENSLAFG00000030814	-	100	64.674	ENSFDAG00000008310	SYF2	75	64.674	Fukomys_damarensis
ENSLAFG00000030814	-	100	40.217	ENSFHEG00000007238	syf2	81	39.130	Fundulus_heteroclitus
ENSLAFG00000030814	-	100	57.065	ENSGMOG00000019138	syf2	82	57.065	Gadus_morhua
ENSLAFG00000030814	-	100	62.567	ENSGALG00000013639	SYF2	73	62.567	Gallus_gallus
ENSLAFG00000030814	-	100	52.174	ENSGAFG00000019435	syf2	77	52.174	Gambusia_affinis
ENSLAFG00000030814	-	100	55.978	ENSGACG00000007305	syf2	77	55.978	Gasterosteus_aculeatus
ENSLAFG00000030814	-	100	63.784	ENSGAGG00000010670	SYF2	74	63.784	Gopherus_agassizii
ENSLAFG00000030814	-	100	65.217	ENSGGOG00000012796	SYF2	75	65.217	Gorilla_gorilla
ENSLAFG00000030814	-	100	54.348	ENSHBUG00000020477	syf2	79	54.348	Haplochromis_burtoni
ENSLAFG00000030814	-	100	54.945	ENSHGLG00000004304	-	75	52.198	Heterocephalus_glaber_female
ENSLAFG00000030814	-	100	65.217	ENSHGLG00000014393	SYF2	75	65.217	Heterocephalus_glaber_female
ENSLAFG00000030814	-	100	65.217	ENSHGLG00100014722	SYF2	75	65.217	Heterocephalus_glaber_male
ENSLAFG00000030814	-	100	55.435	ENSHCOG00000012904	syf2	60	55.435	Hippocampus_comes
ENSLAFG00000030814	-	100	58.696	ENSIPUG00000019859	syf2	77	58.696	Ictalurus_punctatus
ENSLAFG00000030814	-	77	71.127	ENSSTOG00000023984	SYF2	97	71.127	Ictidomys_tridecemlineatus
ENSLAFG00000030814	-	97	62.360	ENSJJAG00000013301	Syf2	82	64.740	Jaculus_jaculus
ENSLAFG00000030814	-	100	54.348	ENSKMAG00000013856	syf2	77	54.348	Kryptolebias_marmoratus
ENSLAFG00000030814	-	100	55.435	ENSLBEG00000014425	syf2	77	55.435	Labrus_bergylta
ENSLAFG00000030814	-	100	58.696	ENSLACG00000012064	SYF2	77	58.696	Latimeria_chalumnae
ENSLAFG00000030814	-	100	58.696	ENSLOCG00000002728	syf2	73	58.696	Lepisosteus_oculatus
ENSLAFG00000030814	-	100	65.217	ENSMFAG00000041831	SYF2	75	65.217	Macaca_fascicularis
ENSLAFG00000030814	-	100	65.217	ENSMMUG00000002968	SYF2	75	65.217	Macaca_mulatta
ENSLAFG00000030814	-	100	65.217	ENSMNEG00000030180	SYF2	75	65.217	Macaca_nemestrina
ENSLAFG00000030814	-	100	65.217	ENSMLEG00000030248	SYF2	75	65.217	Mandrillus_leucophaeus
ENSLAFG00000030814	-	100	53.804	ENSMAMG00000010403	syf2	76	53.804	Mastacembelus_armatus
ENSLAFG00000030814	-	100	54.348	ENSMZEG00005006429	syf2	77	54.348	Maylandia_zebra
ENSLAFG00000030814	-	94	62.500	ENSMGAG00000002019	SYF2	86	62.500	Meleagris_gallopavo
ENSLAFG00000030814	-	100	63.043	ENSMAUG00000018974	Syf2	76	63.043	Mesocricetus_auratus
ENSLAFG00000030814	-	94	64.205	ENSMICG00000016191	SYF2	86	64.205	Microcebus_murinus
ENSLAFG00000030814	-	100	63.587	ENSMOCG00000022938	Syf2	76	63.587	Microtus_ochrogaster
ENSLAFG00000030814	-	100	53.804	ENSMMOG00000002396	syf2	77	53.804	Mola_mola
ENSLAFG00000030814	-	100	61.828	ENSMODG00000013951	-	81	61.828	Monodelphis_domestica
ENSLAFG00000030814	-	100	55.135	ENSMALG00000010706	syf2	76	55.135	Monopterus_albus
ENSLAFG00000030814	-	100	63.043	MGP_CAROLIEiJ_G0026633	Syf2	76	63.043	Mus_caroli
ENSLAFG00000030814	-	100	63.043	ENSMUSG00000028821	Syf2	76	63.043	Mus_musculus
ENSLAFG00000030814	-	100	63.043	MGP_PahariEiJ_G0028966	Syf2	76	63.043	Mus_pahari
ENSLAFG00000030814	-	100	63.043	MGP_SPRETEiJ_G0027613	Syf2	76	63.043	Mus_spretus
ENSLAFG00000030814	-	100	64.674	ENSMPUG00000015802	-	74	64.674	Mustela_putorius_furo
ENSLAFG00000030814	-	100	64.674	ENSMPUG00000015801	-	74	64.674	Mustela_putorius_furo
ENSLAFG00000030814	-	100	64.674	ENSMLUG00000001885	SYF2	75	64.674	Myotis_lucifugus
ENSLAFG00000030814	-	100	64.130	ENSNGAG00000007912	Syf2	74	64.130	Nannospalax_galili
ENSLAFG00000030814	-	100	48.087	ENSNBRG00000010720	syf2	77	48.087	Neolamprologus_brichardi
ENSLAFG00000030814	-	100	65.217	ENSNLEG00000035185	SYF2	75	65.217	Nomascus_leucogenys
ENSLAFG00000030814	-	100	63.587	ENSOPRG00000012870	SYF2	75	63.587	Ochotona_princeps
ENSLAFG00000030814	-	100	65.217	ENSODEG00000017664	-	77	65.217	Octodon_degus
ENSLAFG00000030814	-	100	56.522	ENSODEG00000014338	-	74	56.522	Octodon_degus
ENSLAFG00000030814	-	100	53.804	ENSONIG00000008213	syf2	77	53.804	Oreochromis_niloticus
ENSLAFG00000030814	-	96	63.128	ENSOANG00000009552	SYF2	87	63.128	Ornithorhynchus_anatinus
ENSLAFG00000030814	-	100	65.217	ENSOCUG00000013050	SYF2	75	65.217	Oryctolagus_cuniculus
ENSLAFG00000030814	-	100	55.435	ENSORLG00000028820	syf2	79	55.435	Oryzias_latipes
ENSLAFG00000030814	-	100	55.435	ENSORLG00020018333	syf2	77	55.435	Oryzias_latipes_hni
ENSLAFG00000030814	-	100	55.435	ENSORLG00015014665	syf2	77	55.435	Oryzias_latipes_hsok
ENSLAFG00000030814	-	100	54.891	ENSOMEG00000013911	syf2	77	54.891	Oryzias_melastigma
ENSLAFG00000030814	-	100	64.674	ENSOGAG00000009962	SYF2	75	64.674	Otolemur_garnettii
ENSLAFG00000030814	-	92	50.867	ENSOARG00000006269	-	87	47.674	Ovis_aries
ENSLAFG00000030814	-	100	64.516	ENSOARG00000006348	-	75	64.516	Ovis_aries
ENSLAFG00000030814	-	100	65.217	ENSPPAG00000036579	SYF2	75	65.217	Pan_paniscus
ENSLAFG00000030814	-	100	65.217	ENSPPRG00000001638	-	74	65.217	Panthera_pardus
ENSLAFG00000030814	-	100	64.674	ENSPPRG00000001651	-	74	64.674	Panthera_pardus
ENSLAFG00000030814	-	100	65.217	ENSPTIG00000005711	-	67	65.217	Panthera_tigris_altaica
ENSLAFG00000030814	-	100	64.674	ENSPTIG00000007036	-	74	64.674	Panthera_tigris_altaica
ENSLAFG00000030814	-	100	65.217	ENSPTRG00000000352	SYF2	75	65.217	Pan_troglodytes
ENSLAFG00000030814	-	100	65.217	ENSPANG00000008139	SYF2	75	65.217	Papio_anubis
ENSLAFG00000030814	-	100	58.152	ENSPKIG00000008130	syf2	78	58.152	Paramormyrops_kingsleyae
ENSLAFG00000030814	-	100	62.703	ENSPSIG00000011816	SYF2	71	62.703	Pelodiscus_sinensis
ENSLAFG00000030814	-	100	53.476	ENSPMGG00000008755	syf2	71	53.476	Periophthalmus_magnuspinnatus
ENSLAFG00000030814	-	100	63.043	ENSPEMG00000008283	Syf2	76	63.043	Peromyscus_maniculatus_bairdii
ENSLAFG00000030814	-	100	64.130	ENSPCIG00000014235	SYF2	73	64.130	Phascolarctos_cinereus
ENSLAFG00000030814	-	100	53.261	ENSPFOG00000004116	syf2	76	53.261	Poecilia_formosa
ENSLAFG00000030814	-	100	53.261	ENSPLAG00000006691	syf2	79	53.261	Poecilia_latipinna
ENSLAFG00000030814	-	100	52.174	ENSPMEG00000011684	syf2	78	52.174	Poecilia_mexicana
ENSLAFG00000030814	-	100	52.717	ENSPREG00000003009	syf2	77	52.717	Poecilia_reticulata
ENSLAFG00000030814	-	100	65.217	ENSPPYG00000001713	SYF2	75	65.217	Pongo_abelii
ENSLAFG00000030814	-	73	45.865	ENSPCOG00000027011	SYF2	54	44.355	Propithecus_coquereli
ENSLAFG00000030814	-	100	55.435	ENSPVAG00000005841	SYF2	75	55.435	Pteropus_vampyrus
ENSLAFG00000030814	-	100	54.348	ENSPNYG00000004979	syf2	77	54.348	Pundamilia_nyererei
ENSLAFG00000030814	-	100	58.824	ENSPNAG00000015570	syf2	77	58.824	Pygocentrus_nattereri
ENSLAFG00000030814	-	100	63.043	ENSRNOG00000060597	Syf2	76	63.043	Rattus_norvegicus
ENSLAFG00000030814	-	100	61.957	ENSRBIG00000042970	SYF2	75	61.957	Rhinopithecus_bieti
ENSLAFG00000030814	-	100	65.217	ENSRROG00000001347	SYF2	75	65.217	Rhinopithecus_roxellana
ENSLAFG00000030814	-	100	64.674	ENSSBOG00000020184	SYF2	75	64.674	Saimiri_boliviensis_boliviensis
ENSLAFG00000030814	-	100	63.043	ENSSHAG00000015630	-	73	63.043	Sarcophilus_harrisii
ENSLAFG00000030814	-	97	63.889	ENSSHAG00000007152	-	87	63.889	Sarcophilus_harrisii
ENSLAFG00000030814	-	100	55.435	ENSSFOG00015023647	syf2	77	55.435	Scleropages_formosus
ENSLAFG00000030814	-	100	55.676	ENSSMAG00000009867	syf2	77	55.676	Scophthalmus_maximus
ENSLAFG00000030814	-	100	53.804	ENSSDUG00000013072	syf2	77	53.804	Seriola_dumerili
ENSLAFG00000030814	-	100	53.804	ENSSLDG00000012677	syf2	77	53.804	Seriola_lalandi_dorsalis
ENSLAFG00000030814	-	71	58.462	ENSSARG00000012889	SYF2	50	57.258	Sorex_araneus
ENSLAFG00000030814	-	100	59.783	ENSSPUG00000005251	SYF2	72	59.783	Sphenodon_punctatus
ENSLAFG00000030814	-	100	54.891	ENSSPAG00000009626	syf2	77	54.891	Stegastes_partitus
ENSLAFG00000030814	-	100	65.217	ENSSSCG00000037481	SYF2	75	65.217	Sus_scrofa
ENSLAFG00000030814	-	79	46.259	ENSTGUG00000001126	SYF2	75	45.455	Taeniopygia_guttata
ENSLAFG00000030814	-	100	55.435	ENSTRUG00000001499	syf2	73	55.435	Takifugu_rubripes
ENSLAFG00000030814	-	100	53.804	ENSTNIG00000016912	syf2	82	53.804	Tetraodon_nigroviridis
ENSLAFG00000030814	-	75	59.574	ENSTBEG00000017370	SYF2	65	55.000	Tupaia_belangeri
ENSLAFG00000030814	-	100	65.217	ENSTTRG00000003550	SYF2	75	65.217	Tursiops_truncatus
ENSLAFG00000030814	-	100	64.130	ENSUAMG00000002897	SYF2	74	64.130	Ursus_americanus
ENSLAFG00000030814	-	100	64.130	ENSUMAG00000013108	SYF2	74	64.130	Ursus_maritimus
ENSLAFG00000030814	-	100	64.674	ENSVPAG00000005705	SYF2	75	64.674	Vicugna_pacos
ENSLAFG00000030814	-	100	64.674	ENSVVUG00000027175	-	74	64.674	Vulpes_vulpes
ENSLAFG00000030814	-	97	64.804	ENSVVUG00000027181	-	74	64.130	Vulpes_vulpes
ENSLAFG00000030814	-	100	60.870	ENSXETG00000022797	syf2	73	60.870	Xenopus_tropicalis
ENSLAFG00000030814	-	100	52.717	ENSXMAG00000022698	syf2	77	52.717	Xiphophorus_maculatus