EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000030960 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 1083 bases
Position: chrscaffold_15:16856215-16857297
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000023869	MMR_HSR1	PF01926.23	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000033172	-	1083	-	ENSLAFP00000023869	360 (aa)	-	G3U7R1

Gene Model

Click here to download ENSLAFG00000030960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000030960's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000030960	-	100	97.784	ENSLAFG00000011964	-	100	97.784
ENSLAFG00000030960	-	83	46.333	ENSLAFG00000007655	SEPT9	51	46.333
ENSLAFG00000030960	-	89	56.268	ENSLAFG00000027789	SEPT1	94	56.268
ENSLAFG00000030960	-	83	48.355	ENSLAFG00000015724	SEPT3	84	48.355
ENSLAFG00000030960	-	83	44.444	ENSLAFG00000030360	SEPT12	84	44.444
ENSLAFG00000030960	-	89	59.524	ENSLAFG00000028004	-	91	59.172
ENSLAFG00000030960	-	81	44.108	ENSLAFG00000008567	SEPT8	66	44.108
ENSLAFG00000030960	-	80	61.856	ENSLAFG00000011254	SEPT7	65	61.856
ENSLAFG00000030960	-	86	42.038	ENSLAFG00000016488	SEPT11	70	42.038
ENSLAFG00000030960	-	91	60.227	ENSLAFG00000003381	SEPT4	72	60.756

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000030960	-	94	87.006	ENSAPOG00000001837	sept2	95	86.577	Acanthochromis_polyacanthus
ENSLAFG00000030960	-	99	96.089	ENSAMEG00000016539	SEPT2	100	96.089	Ailuropoda_melanoleuca
ENSLAFG00000030960	-	84	92.715	ENSACIG00000021718	sept2	88	93.023	Amphilophus_citrinellus
ENSLAFG00000030960	-	94	90.616	ENSAOCG00000000954	sept2	93	90.691	Amphiprion_ocellaris
ENSLAFG00000030960	-	95	87.427	ENSAPEG00000013904	sept2	93	87.425	Amphiprion_percula
ENSLAFG00000030960	-	99	89.326	ENSATEG00000019489	sept2	98	87.360	Anabas_testudineus
ENSLAFG00000030960	-	100	91.736	ENSACAG00000001408	SEPT2	99	91.736	Anolis_carolinensis
ENSLAFG00000030960	-	94	97.633	ENSANAG00000023789	SEPT2	100	93.531	Aotus_nancymaae
ENSLAFG00000030960	-	100	85.833	ENSACLG00000009428	sept2	100	83.889	Astatotilapia_calliptera
ENSLAFG00000030960	-	97	89.685	ENSAMXG00000039525	sept2	97	87.679	Astyanax_mexicanus
ENSLAFG00000030960	-	100	96.122	ENSBTAG00000002608	SEPT2	100	96.122	Bos_taurus
ENSLAFG00000030960	-	100	96.122	ENSCJAG00000006122	-	98	95.899	Callithrix_jacchus
ENSLAFG00000030960	-	98	96.034	ENSCAFG00000012960	SEPT2	100	96.034	Canis_familiaris
ENSLAFG00000030960	-	100	95.868	ENSCAFG00020025094	-	100	95.868	Canis_lupus_dingo
ENSLAFG00000030960	-	100	96.676	ENSCHIG00000026614	SEPT2	100	96.676	Capra_hircus
ENSLAFG00000030960	-	100	95.845	ENSTSYG00000003579	-	100	95.845	Carlito_syrichta
ENSLAFG00000030960	-	99	77.095	ENSCPOG00000034399	-	99	77.095	Cavia_porcellus
ENSLAFG00000030960	-	100	96.122	ENSCPOG00000013687	-	100	96.122	Cavia_porcellus
ENSLAFG00000030960	-	100	82.548	ENSCCAG00000031252	SEPT2	100	83.102	Cebus_capucinus
ENSLAFG00000030960	-	100	96.399	ENSCATG00000033533	SEPT2	100	96.399	Cercocebus_atys
ENSLAFG00000030960	-	100	96.122	ENSCLAG00000002255	-	100	96.122	Chinchilla_lanigera
ENSLAFG00000030960	-	100	63.435	ENSCLAG00000007700	-	100	63.435	Chinchilla_lanigera
ENSLAFG00000030960	-	100	69.421	ENSCLAG00000003230	-	98	69.697	Chinchilla_lanigera
ENSLAFG00000030960	-	100	96.399	ENSCSAG00000005773	SEPT2	100	96.399	Chlorocebus_sabaeus
ENSLAFG00000030960	-	100	92.992	ENSCHOG00000008715	SEPT2	100	92.992	Choloepus_hoffmanni
ENSLAFG00000030960	-	100	92.541	ENSCPBG00000002410	SEPT2	100	92.541	Chrysemys_picta_bellii
ENSLAFG00000030960	-	89	77.778	ENSCSAVG00000003688	-	96	81.690	Ciona_savignyi
ENSLAFG00000030960	-	100	96.122	ENSCANG00000034470	SEPT2	100	95.031	Colobus_angolensis_palliatus
ENSLAFG00000030960	-	100	95.014	ENSCGRG00001009996	-	100	95.014	Cricetulus_griseus_chok1gshd
ENSLAFG00000030960	-	98	95.198	ENSCGRG00000014494	-	100	95.198	Cricetulus_griseus_crigri
ENSLAFG00000030960	-	93	86.486	ENSCSEG00000017561	sept2	100	84.384	Cynoglossus_semilaevis
ENSLAFG00000030960	-	81	88.699	ENSCVAG00000008351	sept2	89	88.699	Cyprinodon_variegatus
ENSLAFG00000030960	-	98	89.773	ENSDARG00000027590	sept2	95	87.393	Danio_rerio
ENSLAFG00000030960	-	94	96.746	ENSDNOG00000013772	SEPT2	100	95.568	Dasypus_novemcinctus
ENSLAFG00000030960	-	100	96.122	ENSDORG00000000106	-	100	96.122	Dipodomys_ordii
ENSLAFG00000030960	-	76	98.230	ENSETEG00000001868	-	76	98.230	Echinops_telfairi
ENSLAFG00000030960	-	93	80.747	ENSEBUG00000006082	sept2	75	81.034	Eptatretus_burgeri
ENSLAFG00000030960	-	93	62.356	ENSEBUG00000009786	-	96	62.687	Eptatretus_burgeri
ENSLAFG00000030960	-	100	96.676	ENSEASG00005008254	SEPT2	100	96.676	Equus_asinus_asinus
ENSLAFG00000030960	-	100	96.676	ENSECAG00000017553	SEPT2	100	96.676	Equus_caballus
ENSLAFG00000030960	-	96	86.207	ENSELUG00000018507	sept2	95	86.826	Esox_lucius
ENSLAFG00000030960	-	94	96.450	ENSFCAG00000002797	SEPT2	98	95.291	Felis_catus
ENSLAFG00000030960	-	100	93.094	ENSFALG00000003429	SEPT2	100	93.094	Ficedula_albicollis
ENSLAFG00000030960	-	100	96.122	ENSFDAG00000005819	SEPT2	100	96.122	Fukomys_damarensis
ENSLAFG00000030960	-	97	85.714	ENSFHEG00000017419	sept2	98	83.714	Fundulus_heteroclitus
ENSLAFG00000030960	-	98	88.385	ENSGMOG00000017631	sept2	90	86.686	Gadus_morhua
ENSLAFG00000030960	-	100	92.818	ENSGALG00000005809	SEPT2	100	92.818	Gallus_gallus
ENSLAFG00000030960	-	99	85.434	ENSGAFG00000018172	sept2	99	83.473	Gambusia_affinis
ENSLAFG00000030960	-	97	89.112	ENSGACG00000015721	sept2	96	87.106	Gasterosteus_aculeatus
ENSLAFG00000030960	-	100	92.541	ENSGAGG00000004594	SEPT2	100	92.541	Gopherus_agassizii
ENSLAFG00000030960	-	100	96.399	ENSGGOG00000004597	SEPT2	100	96.399	Gorilla_gorilla
ENSLAFG00000030960	-	99	85.908	ENSHBUG00000007012	sept2	98	84.011	Haplochromis_burtoni
ENSLAFG00000030960	-	100	85.319	ENSHGLG00000014923	-	100	85.319	Heterocephalus_glaber_female
ENSLAFG00000030960	-	100	96.122	ENSHGLG00000005291	SEPT2	100	96.122	Heterocephalus_glaber_female
ENSLAFG00000030960	-	100	85.319	ENSHGLG00100001715	-	100	85.319	Heterocephalus_glaber_male
ENSLAFG00000030960	-	100	96.122	ENSHGLG00100018899	SEPT2	100	96.122	Heterocephalus_glaber_male
ENSLAFG00000030960	-	99	87.812	ENSIPUG00000017270	sept2	99	87.535	Ictalurus_punctatus
ENSLAFG00000030960	-	99	95.810	ENSSTOG00000013357	SEPT2	100	95.810	Ictidomys_tridecemlineatus
ENSLAFG00000030960	-	100	95.568	ENSJJAG00000019868	-	100	95.568	Jaculus_jaculus
ENSLAFG00000030960	-	96	89.655	ENSKMAG00000002786	sept2	97	88.793	Kryptolebias_marmoratus
ENSLAFG00000030960	-	98	85.559	ENSLBEG00000007372	sept2	99	84.273	Labrus_bergylta
ENSLAFG00000030960	-	94	84.848	ENSLOCG00000006303	sept2	95	84.789	Lepisosteus_oculatus
ENSLAFG00000030960	-	100	96.399	ENSMFAG00000039700	SEPT2	100	96.399	Macaca_fascicularis
ENSLAFG00000030960	-	100	96.399	ENSMMUG00000004736	SEPT2	100	96.399	Macaca_mulatta
ENSLAFG00000030960	-	100	96.399	ENSMNEG00000004313	SEPT2	100	96.399	Macaca_nemestrina
ENSLAFG00000030960	-	100	96.399	ENSMLEG00000043469	SEPT2	100	96.399	Mandrillus_leucophaeus
ENSLAFG00000030960	-	99	88.202	ENSMAMG00000004271	sept2	98	86.517	Mastacembelus_armatus
ENSLAFG00000030960	-	99	89.045	ENSMZEG00005005022	sept2	98	87.079	Maylandia_zebra
ENSLAFG00000030960	-	100	92.244	ENSMGAG00000003759	SEPT2	99	92.244	Meleagris_gallopavo
ENSLAFG00000030960	-	99	94.972	ENSMAUG00000011950	-	100	96.380	Mesocricetus_auratus
ENSLAFG00000030960	-	100	95.291	ENSMICG00000000909	SEPT2	100	95.291	Microcebus_murinus
ENSLAFG00000030960	-	100	95.568	ENSMOCG00000014906	-	100	95.568	Microtus_ochrogaster
ENSLAFG00000030960	-	96	86.705	ENSMMOG00000018068	sept2	96	84.682	Mola_mola
ENSLAFG00000030960	-	99	94.134	ENSMODG00000016041	SEPT2	99	93.352	Monodelphis_domestica
ENSLAFG00000030960	-	97	89.398	ENSMALG00000002736	sept2	96	87.679	Monopterus_albus
ENSLAFG00000030960	-	100	95.845	MGP_CAROLIEiJ_G0014457	-	100	98.131	Mus_caroli
ENSLAFG00000030960	-	100	96.122	ENSMUSG00000116048	Sept2	100	96.262	Mus_musculus
ENSLAFG00000030960	-	100	96.122	ENSMUSG00000026276	Sept2	100	98.131	Mus_musculus
ENSLAFG00000030960	-	100	95.845	MGP_PahariEiJ_G0027693	-	100	98.131	Mus_pahari
ENSLAFG00000030960	-	100	96.122	MGP_SPRETEiJ_G0015261	-	100	98.131	Mus_spretus
ENSLAFG00000030960	-	100	96.399	ENSMPUG00000000166	SEPT2	100	96.399	Mustela_putorius_furo
ENSLAFG00000030960	-	99	96.089	ENSMLUG00000007108	SEPT2	100	96.089	Myotis_lucifugus
ENSLAFG00000030960	-	100	95.291	ENSNGAG00000022412	-	100	95.291	Nannospalax_galili
ENSLAFG00000030960	-	99	89.045	ENSNBRG00000003359	sept2	98	87.079	Neolamprologus_brichardi
ENSLAFG00000030960	-	100	96.399	ENSNLEG00000013873	SEPT2	100	96.573	Nomascus_leucogenys
ENSLAFG00000030960	-	87	88.217	ENSMEUG00000016519	-	99	88.217	Notamacropus_eugenii
ENSLAFG00000030960	-	78	89.716	ENSMEUG00000007833	-	100	89.716	Notamacropus_eugenii
ENSLAFG00000030960	-	100	92.683	ENSOPRG00000013796	SEPT2	100	92.683	Ochotona_princeps
ENSLAFG00000030960	-	100	94.766	ENSODEG00000019855	-	100	94.766	Octodon_degus
ENSLAFG00000030960	-	100	96.399	ENSODEG00000010316	-	100	96.399	Octodon_degus
ENSLAFG00000030960	-	89	95.327	ENSODEG00000018677	-	100	95.327	Octodon_degus
ENSLAFG00000030960	-	99	89.045	ENSONIG00000010605	sept2	98	87.079	Oreochromis_niloticus
ENSLAFG00000030960	-	100	95.291	ENSOANG00000011758	-	100	95.291	Ornithorhynchus_anatinus
ENSLAFG00000030960	-	100	94.737	ENSOCUG00000015500	SEPT2	100	94.737	Oryctolagus_cuniculus
ENSLAFG00000030960	-	91	90.854	ENSORLG00000004835	sept2	97	90.994	Oryzias_latipes
ENSLAFG00000030960	-	94	86.932	ENSORLG00020003263	sept2	95	86.994	Oryzias_latipes_hni
ENSLAFG00000030960	-	94	86.932	ENSORLG00015006412	sept2	95	86.994	Oryzias_latipes_hsok
ENSLAFG00000030960	-	94	90.855	ENSOMEG00000008923	sept2	94	90.691	Oryzias_melastigma
ENSLAFG00000030960	-	93	96.429	ENSOGAG00000004457	SEPT2	100	95.291	Otolemur_garnettii
ENSLAFG00000030960	-	93	87.761	ENSOARG00000017810	-	99	87.430	Ovis_aries
ENSLAFG00000030960	-	100	96.399	ENSPPAG00000034127	SEPT2	100	96.399	Pan_paniscus
ENSLAFG00000030960	-	94	96.450	ENSPPRG00000012154	SEPT2	100	95.291	Panthera_pardus
ENSLAFG00000030960	-	94	96.450	ENSPTIG00000004202	SEPT2	100	95.327	Panthera_tigris_altaica
ENSLAFG00000030960	-	100	96.399	ENSPTRG00000023481	SEPT2	100	93.801	Pan_troglodytes
ENSLAFG00000030960	-	100	96.399	ENSPANG00000007917	SEPT2	100	96.399	Papio_anubis
ENSLAFG00000030960	-	99	85.366	ENSPKIG00000002533	sept2	100	83.881	Paramormyrops_kingsleyae
ENSLAFG00000030960	-	100	93.370	ENSPSIG00000009642	SEPT2	100	93.370	Pelodiscus_sinensis
ENSLAFG00000030960	-	97	89.685	ENSPMGG00000012338	sept2	88	90.448	Periophthalmus_magnuspinnatus
ENSLAFG00000030960	-	100	95.568	ENSPEMG00000022937	-	100	95.568	Peromyscus_maniculatus_bairdii
ENSLAFG00000030960	-	99	95.251	ENSPCIG00000005866	SEPT2	99	96.049	Phascolarctos_cinereus
ENSLAFG00000030960	-	99	88.483	ENSPFOG00000017007	sept2	97	86.517	Poecilia_formosa
ENSLAFG00000030960	-	99	85.095	ENSPLAG00000003540	sept2	98	83.198	Poecilia_latipinna
ENSLAFG00000030960	-	99	85.095	ENSPMEG00000003785	sept2	98	83.198	Poecilia_mexicana
ENSLAFG00000030960	-	99	85.095	ENSPREG00000007538	sept2	100	83.578	Poecilia_reticulata
ENSLAFG00000030960	-	100	96.399	ENSPPYG00000013353	SEPT2	100	96.399	Pongo_abelii
ENSLAFG00000030960	-	88	96.215	ENSPCAG00000003337	SEPT2	100	96.215	Procavia_capensis
ENSLAFG00000030960	-	100	94.054	ENSPVAG00000000558	SEPT2	100	94.054	Pteropus_vampyrus
ENSLAFG00000030960	-	99	88.764	ENSPNYG00000000783	sept2	98	86.798	Pundamilia_nyererei
ENSLAFG00000030960	-	99	88.483	ENSPNAG00000010720	sept2	98	86.517	Pygocentrus_nattereri
ENSLAFG00000030960	-	100	95.291	ENSRNOG00000017952	Sept2	100	95.291	Rattus_norvegicus
ENSLAFG00000030960	-	100	96.122	ENSRBIG00000032420	SEPT2	91	96.122	Rhinopithecus_bieti
ENSLAFG00000030960	-	100	96.122	ENSRROG00000031700	SEPT2	100	96.122	Rhinopithecus_roxellana
ENSLAFG00000030960	-	100	96.122	ENSSBOG00000016731	SEPT2	100	96.122	Saimiri_boliviensis_boliviensis
ENSLAFG00000030960	-	99	95.251	ENSSHAG00000012877	SEPT2	99	95.251	Sarcophilus_harrisii
ENSLAFG00000030960	-	97	85.912	ENSSFOG00015018742	sept2	98	82.927	Scleropages_formosus
ENSLAFG00000030960	-	96	89.884	ENSSMAG00000007297	sept2	97	89.884	Scophthalmus_maximus
ENSLAFG00000030960	-	97	89.685	ENSSDUG00000011223	sept2	96	87.679	Seriola_dumerili
ENSLAFG00000030960	-	97	89.685	ENSSLDG00000016125	sept2	96	87.679	Seriola_lalandi_dorsalis
ENSLAFG00000030960	-	76	97.273	ENSSARG00000012133	-	76	97.273	Sorex_araneus
ENSLAFG00000030960	-	97	89.398	ENSSPAG00000001557	sept2	93	90.691	Stegastes_partitus
ENSLAFG00000030960	-	100	96.122	ENSSSCG00000016370	SEPT2	100	96.122	Sus_scrofa
ENSLAFG00000030960	-	100	93.094	ENSTGUG00000006160	SEPT2	100	93.094	Taeniopygia_guttata
ENSLAFG00000030960	-	97	89.685	ENSTRUG00000021827	sept2	97	87.679	Takifugu_rubripes
ENSLAFG00000030960	-	97	89.398	ENSTNIG00000007849	sept2	97	86.648	Tetraodon_nigroviridis
ENSLAFG00000030960	-	100	95.856	ENSUAMG00000017781	SEPT2	100	95.856	Ursus_americanus
ENSLAFG00000030960	-	100	96.122	ENSUMAG00000010525	SEPT2	100	96.122	Ursus_maritimus
ENSLAFG00000030960	-	100	96.399	ENSVVUG00000022793	-	100	96.399	Vulpes_vulpes
ENSLAFG00000030960	-	98	89.489	ENSXETG00000012166	sept2	99	89.489	Xenopus_tropicalis
ENSLAFG00000030960	-	100	77.624	ENSXCOG00000007338	sept2	100	75.691	Xiphophorus_couchianus
ENSLAFG00000030960	-	99	88.483	ENSXMAG00000004256	sept2	97	86.517	Xiphophorus_maculatus