EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000031227 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 3043 bases
Position: chrscaffold_104:1991374-1994416
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000022698	RRM_1	PF00076.22	2.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000032673	-	456	-	ENSLAFP00000022698	151 (aa)	-	G3U4E0

Gene Model

Click here to download ENSLAFG00000031227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000031227's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000031227	-	99	60.667	ENSLAFG00000025902	-	60	60.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000031227	-	100	99.338	ENSG00000100836	PABPN1	97	98.925	Homo_sapiens
ENSLAFG00000031227	-	99	82.119	ENSAPOG00000016425	pabpn1	65	82.119	Acanthochromis_polyacanthus
ENSLAFG00000031227	-	100	99.338	ENSAMEG00000007048	BCL2L2-PABPN1	80	99.338	Ailuropoda_melanoleuca
ENSLAFG00000031227	-	100	82.237	ENSACIG00000021744	pabpn1	86	82.237	Amphilophus_citrinellus
ENSLAFG00000031227	-	99	82.119	ENSAOCG00000015805	pabpn1	65	82.119	Amphiprion_ocellaris
ENSLAFG00000031227	-	99	82.119	ENSAPEG00000009623	pabpn1	65	82.119	Amphiprion_percula
ENSLAFG00000031227	-	99	82.781	ENSATEG00000020531	pabpn1	65	82.781	Anabas_testudineus
ENSLAFG00000031227	-	100	90.132	ENSACAG00000006185	-	54	90.132	Anolis_carolinensis
ENSLAFG00000031227	-	100	99.338	ENSANAG00000024513	-	54	99.338	Aotus_nancymaae
ENSLAFG00000031227	-	100	84.211	ENSAMXG00000000452	pabpn1	86	84.211	Astyanax_mexicanus
ENSLAFG00000031227	-	85	94.574	ENSBTAG00000050594	-	51	84.106	Bos_taurus
ENSLAFG00000031227	-	100	97.351	ENSBTAG00000053753	-	56	97.351	Bos_taurus
ENSLAFG00000031227	-	64	75.000	WBGene00003904	pabp-2	68	59.184	Caenorhabditis_elegans
ENSLAFG00000031227	-	100	99.338	ENSCJAG00000007960	-	56	99.338	Callithrix_jacchus
ENSLAFG00000031227	-	100	97.351	ENSCJAG00000004407	-	76	97.351	Callithrix_jacchus
ENSLAFG00000031227	-	100	99.338	ENSTSYG00000033996	BCL2L2-PABPN1	85	99.338	Carlito_syrichta
ENSLAFG00000031227	-	91	98.551	ENSCAPG00000009461	-	99	98.551	Cavia_aperea
ENSLAFG00000031227	-	100	99.338	ENSCCAG00000033954	BCL2L2-PABPN1	56	99.338	Cebus_capucinus
ENSLAFG00000031227	-	100	99.338	ENSCATG00000038536	BCL2L2-PABPN1	56	99.338	Cercocebus_atys
ENSLAFG00000031227	-	99	98.667	ENSCLAG00000012423	PABPN1	56	98.667	Chinchilla_lanigera
ENSLAFG00000031227	-	100	89.404	ENSCHOG00000004798	BCL2L2-PABPN1	65	89.404	Choloepus_hoffmanni
ENSLAFG00000031227	-	100	91.391	ENSCPBG00000026060	-	85	91.391	Chrysemys_picta_bellii
ENSLAFG00000031227	-	96	62.759	ENSCING00000012468	-	60	66.207	Ciona_intestinalis
ENSLAFG00000031227	-	96	60.000	ENSCSAVG00000002001	-	80	63.448	Ciona_savignyi
ENSLAFG00000031227	-	94	90.845	ENSCANG00000030980	-	53	90.580	Colobus_angolensis_palliatus
ENSLAFG00000031227	-	100	99.338	ENSCANG00000009750	BCL2L2-PABPN1	85	99.338	Colobus_angolensis_palliatus
ENSLAFG00000031227	-	100	98.675	ENSCGRG00001019696	Pabpn1	85	98.675	Cricetulus_griseus_chok1gshd
ENSLAFG00000031227	-	100	98.675	ENSCGRG00000011102	Pabpn1	85	98.675	Cricetulus_griseus_crigri
ENSLAFG00000031227	-	100	81.579	ENSCSEG00000008774	pabpn1	65	82.119	Cynoglossus_semilaevis
ENSLAFG00000031227	-	99	78.146	ENSCVAG00000003152	pabpn1	65	80.795	Cyprinodon_variegatus
ENSLAFG00000031227	-	100	83.553	ENSDARG00000045373	pabpn1	65	83.553	Danio_rerio
ENSLAFG00000031227	-	65	73.469	ENSDARG00000087996	pabpn1l	60	73.469	Danio_rerio
ENSLAFG00000031227	-	70	90.566	ENSDORG00000023928	-	74	90.566	Dipodomys_ordii
ENSLAFG00000031227	-	98	62.838	FBgn0005648	Pabp2	63	62.838	Drosophila_melanogaster
ENSLAFG00000031227	-	99	78.808	ENSEBUG00000002322	pabpn1	65	78.808	Eptatretus_burgeri
ENSLAFG00000031227	-	100	91.391	ENSEEUG00000012973	-	51	91.391	Erinaceus_europaeus
ENSLAFG00000031227	-	100	86.184	ENSELUG00000022654	pabpn1	64	86.184	Esox_lucius
ENSLAFG00000031227	-	100	98.013	ENSFDAG00000018381	BCL2L2-PABPN1	85	98.013	Fukomys_damarensis
ENSLAFG00000031227	-	99	76.000	ENSFHEG00000007215	pabpn1	64	80.000	Fundulus_heteroclitus
ENSLAFG00000031227	-	100	81.699	ENSGAFG00000017099	pabpn1	65	82.237	Gambusia_affinis
ENSLAFG00000031227	-	99	77.160	ENSGACG00000002167	pabpn1	66	77.160	Gasterosteus_aculeatus
ENSLAFG00000031227	-	94	86.620	ENSGGOG00000039675	-	54	86.620	Gorilla_gorilla
ENSLAFG00000031227	-	100	99.338	ENSGGOG00000022683	-	56	99.338	Gorilla_gorilla
ENSLAFG00000031227	-	100	84.768	ENSGGOG00000025919	-	98	83.784	Gorilla_gorilla
ENSLAFG00000031227	-	100	82.237	ENSHBUG00000019523	pabpn1	65	82.781	Haplochromis_burtoni
ENSLAFG00000031227	-	100	98.675	ENSHGLG00000002927	-	69	98.165	Heterocephalus_glaber_female
ENSLAFG00000031227	-	100	74.834	ENSHGLG00000009842	-	82	74.834	Heterocephalus_glaber_female
ENSLAFG00000031227	-	93	90.345	ENSHGLG00100018935	-	82	90.345	Heterocephalus_glaber_male
ENSLAFG00000031227	-	100	98.675	ENSHGLG00100006673	-	85	98.675	Heterocephalus_glaber_male
ENSLAFG00000031227	-	99	76.667	ENSHCOG00000004655	pabpn1	65	81.457	Hippocampus_comes
ENSLAFG00000031227	-	100	79.605	ENSIPUG00000000180	-	67	79.605	Ictalurus_punctatus
ENSLAFG00000031227	-	100	82.895	ENSIPUG00000008085	PABPN1	65	82.895	Ictalurus_punctatus
ENSLAFG00000031227	-	100	99.338	ENSSTOG00000029847	BCL2L2-PABPN1	85	99.338	Ictidomys_tridecemlineatus
ENSLAFG00000031227	-	100	99.338	ENSJJAG00000023507	Gm20521	85	99.338	Jaculus_jaculus
ENSLAFG00000031227	-	99	81.579	ENSKMAG00000018748	pabpn1	65	81.579	Kryptolebias_marmoratus
ENSLAFG00000031227	-	99	82.781	ENSLBEG00000027266	pabpn1	65	82.781	Labrus_bergylta
ENSLAFG00000031227	-	92	86.331	ENSLACG00000000646	pabpn1	61	89.928	Latimeria_chalumnae
ENSLAFG00000031227	-	92	84.286	ENSLOCG00000000796	pabpn1	51	84.286	Lepisosteus_oculatus
ENSLAFG00000031227	-	99	67.333	ENSLOCG00000004694	pabpn1l	67	68.027	Lepisosteus_oculatus
ENSLAFG00000031227	-	93	92.199	ENSMFAG00000031355	-	99	92.199	Macaca_fascicularis
ENSLAFG00000031227	-	100	99.338	ENSMFAG00000032183	BCL2L2-PABPN1	85	99.338	Macaca_fascicularis
ENSLAFG00000031227	-	100	99.338	ENSMMUG00000014747	BCL2L2-PABPN1	100	99.315	Macaca_mulatta
ENSLAFG00000031227	-	99	89.933	ENSMMUG00000048382	-	50	89.933	Macaca_mulatta
ENSLAFG00000031227	-	99	89.933	ENSMNEG00000035750	-	99	92.199	Macaca_nemestrina
ENSLAFG00000031227	-	100	99.338	ENSMNEG00000045065	BCL2L2-PABPN1	56	99.338	Macaca_nemestrina
ENSLAFG00000031227	-	100	99.338	ENSMLEG00000043862	BCL2L2-PABPN1	85	99.338	Mandrillus_leucophaeus
ENSLAFG00000031227	-	99	87.919	ENSMLEG00000034623	-	99	90.071	Mandrillus_leucophaeus
ENSLAFG00000031227	-	91	82.734	ENSMAMG00000007979	pabpn1	51	81.208	Mastacembelus_armatus
ENSLAFG00000031227	-	100	98.675	ENSMAUG00000007383	Gm20521	51	98.675	Mesocricetus_auratus
ENSLAFG00000031227	-	100	99.338	ENSMICG00000010002	BCL2L2-PABPN1	56	99.338	Microcebus_murinus
ENSLAFG00000031227	-	100	98.013	ENSMOCG00000018557	Gm20521	66	98.165	Microtus_ochrogaster
ENSLAFG00000031227	-	99	83.444	ENSMMOG00000005405	pabpn1	65	83.444	Mola_mola
ENSLAFG00000031227	-	91	82.734	ENSMALG00000019612	pabpn1	50	81.757	Monopterus_albus
ENSLAFG00000031227	-	100	96.689	MGP_CAROLIEiJ_G0019277	Pabpn1	85	96.689	Mus_caroli
ENSLAFG00000031227	-	100	97.351	ENSMUSG00000022194	Pabpn1	85	97.351	Mus_musculus
ENSLAFG00000031227	-	100	97.351	MGP_PahariEiJ_G0030295	Pabpn1	100	97.619	Mus_pahari
ENSLAFG00000031227	-	100	97.351	MGP_SPRETEiJ_G0020166	Pabpn1	85	97.351	Mus_spretus
ENSLAFG00000031227	-	92	99.281	ENSMPUG00000006775	-	83	99.281	Mustela_putorius_furo
ENSLAFG00000031227	-	100	92.810	ENSMLUG00000012452	-	50	93.464	Myotis_lucifugus
ENSLAFG00000031227	-	100	98.675	ENSMLUG00000003800	-	80	98.675	Myotis_lucifugus
ENSLAFG00000031227	-	100	95.364	ENSMLUG00000028677	-	56	95.364	Myotis_lucifugus
ENSLAFG00000031227	-	100	82.237	ENSNBRG00000023955	pabpn1	86	82.237	Neolamprologus_brichardi
ENSLAFG00000031227	-	98	72.297	ENSNLEG00000035292	-	99	72.297	Nomascus_leucogenys
ENSLAFG00000031227	-	100	99.338	ENSNLEG00000015007	-	54	99.338	Nomascus_leucogenys
ENSLAFG00000031227	-	93	82.979	ENSNLEG00000030598	-	53	82.979	Nomascus_leucogenys
ENSLAFG00000031227	-	99	88.000	ENSODEG00000011555	-	80	88.000	Octodon_degus
ENSLAFG00000031227	-	97	95.890	ENSOANG00000009218	-	100	95.890	Ornithorhynchus_anatinus
ENSLAFG00000031227	-	100	98.013	ENSOCUG00000016174	PABPN1	55	98.013	Oryctolagus_cuniculus
ENSLAFG00000031227	-	98	79.195	ENSORLG00000027900	pabpn1	63	79.195	Oryzias_latipes
ENSLAFG00000031227	-	85	86.719	ENSORLG00020004681	pabpn1	50	82.432	Oryzias_latipes_hni
ENSLAFG00000031227	-	99	83.444	ENSORLG00015000018	pabpn1	65	83.444	Oryzias_latipes_hsok
ENSLAFG00000031227	-	99	78.523	ENSOMEG00000016618	pabpn1	53	78.523	Oryzias_melastigma
ENSLAFG00000031227	-	94	85.915	ENSPPAG00000039421	-	81	85.915	Pan_paniscus
ENSLAFG00000031227	-	100	99.338	ENSPPAG00000028984	BCL2L2-PABPN1	83	99.281	Pan_paniscus
ENSLAFG00000031227	-	100	99.338	ENSPTIG00000001063	BCL2L2-PABPN1	85	99.338	Panthera_tigris_altaica
ENSLAFG00000031227	-	100	99.338	ENSPTRG00000006167	BCL2L2	56	99.338	Pan_troglodytes
ENSLAFG00000031227	-	91	84.783	ENSPTRG00000047273	-	53	84.783	Pan_troglodytes
ENSLAFG00000031227	-	99	89.933	ENSPANG00000023326	-	99	92.199	Papio_anubis
ENSLAFG00000031227	-	100	99.338	ENSPANG00000021100	BCL2L2-PABPN1	56	99.338	Papio_anubis
ENSLAFG00000031227	-	72	75.455	ENSPKIG00000008340	pabpn1l	67	64.189	Paramormyrops_kingsleyae
ENSLAFG00000031227	-	100	84.211	ENSPKIG00000008144	-	51	82.667	Paramormyrops_kingsleyae
ENSLAFG00000031227	-	100	82.237	ENSPKIG00000018052	pabpn1	65	82.237	Paramormyrops_kingsleyae
ENSLAFG00000031227	-	75	88.596	ENSPSIG00000011959	-	83	88.596	Pelodiscus_sinensis
ENSLAFG00000031227	-	91	82.014	ENSPMGG00000022027	pabpn1	51	82.014	Periophthalmus_magnuspinnatus
ENSLAFG00000031227	-	100	98.675	ENSPEMG00000008332	Gm20521	66	98.165	Peromyscus_maniculatus_bairdii
ENSLAFG00000031227	-	68	89.320	ENSPMAG00000006212	pabpn1	66	75.316	Petromyzon_marinus
ENSLAFG00000031227	-	100	96.026	ENSPCIG00000027751	-	54	80.556	Phascolarctos_cinereus
ENSLAFG00000031227	-	100	77.778	ENSPFOG00000010351	pabpn1	64	80.921	Poecilia_formosa
ENSLAFG00000031227	-	91	81.429	ENSPLAG00000022696	pabpn1	51	80.000	Poecilia_latipinna
ENSLAFG00000031227	-	100	77.778	ENSPMEG00000020856	pabpn1	65	80.921	Poecilia_mexicana
ENSLAFG00000031227	-	100	77.778	ENSPREG00000011278	pabpn1	65	80.921	Poecilia_reticulata
ENSLAFG00000031227	-	100	99.338	ENSPCOG00000028047	BCL2L2-PABPN1	56	99.338	Propithecus_coquereli
ENSLAFG00000031227	-	100	96.689	ENSPVAG00000005270	PABPN1	50	96.689	Pteropus_vampyrus
ENSLAFG00000031227	-	100	82.237	ENSPNYG00000013182	pabpn1	65	82.781	Pundamilia_nyererei
ENSLAFG00000031227	-	97	65.753	ENSPNAG00000021666	pabpn1l	68	68.027	Pygocentrus_nattereri
ENSLAFG00000031227	-	100	84.211	ENSPNAG00000023526	pabpn1	65	84.211	Pygocentrus_nattereri
ENSLAFG00000031227	-	100	98.013	ENSRNOG00000042195	Pabpn1	50	98.013	Rattus_norvegicus
ENSLAFG00000031227	-	94	90.845	ENSRBIG00000039547	-	54	90.580	Rhinopithecus_bieti
ENSLAFG00000031227	-	100	86.093	ENSRBIG00000042811	-	63	86.093	Rhinopithecus_bieti
ENSLAFG00000031227	-	100	99.338	ENSRROG00000045535	BCL2L2-PABPN1	85	99.338	Rhinopithecus_roxellana
ENSLAFG00000031227	-	94	91.549	ENSRROG00000040409	-	54	91.304	Rhinopithecus_roxellana
ENSLAFG00000031227	-	100	91.463	ENSSBOG00000026930	BCL2L2-PABPN1	83	99.281	Saimiri_boliviensis_boliviensis
ENSLAFG00000031227	-	100	80.132	ENSSHAG00000007707	-	64	80.132	Sarcophilus_harrisii
ENSLAFG00000031227	-	100	96.026	ENSSHAG00000014841	-	69	96.026	Sarcophilus_harrisii
ENSLAFG00000031227	-	100	81.579	ENSSFOG00015014718	pabpn1	65	81.579	Scleropages_formosus
ENSLAFG00000031227	-	97	63.014	ENSSFOG00015015833	pabpn1l	63	66.901	Scleropages_formosus
ENSLAFG00000031227	-	100	82.237	ENSSFOG00015012565	pabpn1	68	82.237	Scleropages_formosus
ENSLAFG00000031227	-	100	82.237	ENSSMAG00000020157	pabpn1	65	82.781	Scophthalmus_maximus
ENSLAFG00000031227	-	91	82.734	ENSSDUG00000020582	pabpn1	51	81.208	Seriola_dumerili
ENSLAFG00000031227	-	99	82.781	ENSSLDG00000007118	pabpn1	65	82.781	Seriola_lalandi_dorsalis
ENSLAFG00000031227	-	100	90.066	ENSSPUG00000018308	-	85	90.066	Sphenodon_punctatus
ENSLAFG00000031227	-	99	82.781	ENSSPAG00000021658	pabpn1	65	82.781	Stegastes_partitus
ENSLAFG00000031227	-	99	52.000	ENSSSCG00000038472	-	79	52.000	Sus_scrofa
ENSLAFG00000031227	-	99	75.168	ENSSSCG00000034805	-	56	74.497	Sus_scrofa
ENSLAFG00000031227	-	99	82.781	ENSTRUG00000023664	pabpn1	65	82.781	Takifugu_rubripes
ENSLAFG00000031227	-	99	78.289	ENSTNIG00000005369	pabpn1	70	78.289	Tetraodon_nigroviridis
ENSLAFG00000031227	-	100	99.338	ENSVVUG00000019912	BCL2L2-PABPN1	59	99.338	Vulpes_vulpes
ENSLAFG00000031227	-	100	88.742	ENSXETG00000014597	pabpn1	51	92.053	Xenopus_tropicalis
ENSLAFG00000031227	-	99	78.947	ENSXCOG00000005158	pabpn1	89	81.579	Xiphophorus_couchianus
ENSLAFG00000031227	-	100	78.431	ENSXMAG00000006196	pabpn1	65	81.579	Xiphophorus_maculatus