EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000031239 (Gene tree)
Gene ID: -
Gene Symbol: DDX28
Alias: FLJ11282|MDDX28
Full Name: DEAD-box helicase 28
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 1623 bases
Position: chrscaffold_48:9418180-9419802
Accession: 100664574
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000022281	DEAD	PF00270.29	1.9e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000027735	DDX28-201	1623	-	ENSLAFP00000022281	540 (aa)	XP_003417182	G3U373

Gene Model

Click here to download ENSLAFG00000031239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000031239's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000031239	DDX28	72	30.476	ENSLAFG00000018206	DDX56	72	30.806
ENSLAFG00000031239	DDX28	72	34.772	ENSLAFG00000015474	DDX47	78	34.772
ENSLAFG00000031239	DDX28	76	31.043	ENSLAFG00000002934	DDX49	77	31.051
ENSLAFG00000031239	DDX28	68	30.414	ENSLAFG00000015379	DDX31	57	30.414
ENSLAFG00000031239	DDX28	66	30.303	ENSLAFG00000009820	-	68	30.303
ENSLAFG00000031239	DDX28	67	39.344	ENSLAFG00000002213	DDX1	53	39.344

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000031239	DDX28	100	84.815	ENSG00000182810	DDX28	100	84.815	Homo_sapiens
ENSLAFG00000031239	DDX28	94	48.842	ENSAPOG00000000991	ddx28	89	48.842	Acanthochromis_polyacanthus
ENSLAFG00000031239	DDX28	99	84.230	ENSAMEG00000019426	DDX28	96	85.214	Ailuropoda_melanoleuca
ENSLAFG00000031239	DDX28	93	48.932	ENSACIG00000021615	ddx28	90	48.932	Amphilophus_citrinellus
ENSLAFG00000031239	DDX28	94	49.421	ENSAOCG00000004610	ddx28	89	49.421	Amphiprion_ocellaris
ENSLAFG00000031239	DDX28	94	49.228	ENSAPEG00000002143	ddx28	89	49.228	Amphiprion_percula
ENSLAFG00000031239	DDX28	95	50.962	ENSATEG00000018691	ddx28	91	50.962	Anabas_testudineus
ENSLAFG00000031239	DDX28	94	54.102	ENSACAG00000009755	DDX28	94	54.102	Anolis_carolinensis
ENSLAFG00000031239	DDX28	93	47.860	ENSACLG00000012984	ddx28	89	47.860	Astatotilapia_calliptera
ENSLAFG00000031239	DDX28	94	48.780	ENSAMXG00000005878	ddx28	91	48.780	Astyanax_mexicanus
ENSLAFG00000031239	DDX28	100	85.370	ENSBTAG00000004290	DDX28	94	86.381	Bos_taurus
ENSLAFG00000031239	DDX28	98	85.606	ENSCAFG00000020327	DDX28	99	85.606	Canis_familiaris
ENSLAFG00000031239	DDX28	98	85.606	ENSCAFG00020019785	DDX28	99	85.606	Canis_lupus_dingo
ENSLAFG00000031239	DDX28	97	84.674	ENSCHIG00000009658	DDX28	94	85.049	Capra_hircus
ENSLAFG00000031239	DDX28	99	80.519	ENSCPOG00000013746	DDX28	95	82.227	Cavia_porcellus
ENSLAFG00000031239	DDX28	99	83.302	ENSCSAG00000018472	DDX28	99	83.302	Chlorocebus_sabaeus
ENSLAFG00000031239	DDX28	87	60.934	ENSCPBG00000012105	DDX28	85	61.072	Chrysemys_picta_bellii
ENSLAFG00000031239	DDX28	68	38.235	ENSCSAVG00000006341	-	94	37.968	Ciona_savignyi
ENSLAFG00000031239	DDX28	97	83.206	ENSCGRG00001024412	Ddx28	100	83.206	Cricetulus_griseus_chok1gshd
ENSLAFG00000031239	DDX28	94	48.837	ENSCSEG00000011651	ddx28	90	48.837	Cynoglossus_semilaevis
ENSLAFG00000031239	DDX28	96	49.526	ENSCVAG00000004044	ddx28	91	50.194	Cyprinodon_variegatus
ENSLAFG00000031239	DDX28	94	50.000	ENSDARG00000060411	ddx28	90	50.000	Danio_rerio
ENSLAFG00000031239	DDX28	68	87.772	ENSDNOG00000033593	DDX28	99	87.772	Dasypus_novemcinctus
ENSLAFG00000031239	DDX28	99	81.076	ENSDORG00000028868	Ddx28	95	82.490	Dipodomys_ordii
ENSLAFG00000031239	DDX28	87	34.664	FBgn0086130	Dbp21E2	86	34.519	Drosophila_melanogaster
ENSLAFG00000031239	DDX28	99	84.230	ENSETEG00000001062	-	95	85.992	Echinops_telfairi
ENSLAFG00000031239	DDX28	74	43.750	ENSEBUG00000004791	ddx28	80	41.475	Eptatretus_burgeri
ENSLAFG00000031239	DDX28	100	86.296	ENSEASG00005020387	DDX28	100	86.296	Equus_asinus_asinus
ENSLAFG00000031239	DDX28	100	86.852	ENSECAG00000006451	DDX28	100	86.852	Equus_caballus
ENSLAFG00000031239	DDX28	78	75.656	ENSEEUG00000005017	DDX28	94	76.733	Erinaceus_europaeus
ENSLAFG00000031239	DDX28	93	50.195	ENSELUG00000005302	ddx28	95	50.392	Esox_lucius
ENSLAFG00000031239	DDX28	99	84.972	ENSFCAG00000012858	DDX28	95	86.019	Felis_catus
ENSLAFG00000031239	DDX28	96	49.621	ENSFHEG00000012573	ddx28	91	50.096	Fundulus_heteroclitus
ENSLAFG00000031239	DDX28	93	47.184	ENSGMOG00000017045	ddx28	96	47.184	Gadus_morhua
ENSLAFG00000031239	DDX28	94	51.718	ENSGALG00000048700	DDX28	89	51.908	Gallus_gallus
ENSLAFG00000031239	DDX28	93	48.538	ENSGAFG00000009249	ddx28	89	48.538	Gambusia_affinis
ENSLAFG00000031239	DDX28	99	48.080	ENSGACG00000016367	ddx28	95	49.808	Gasterosteus_aculeatus
ENSLAFG00000031239	DDX28	81	58.636	ENSGAGG00000004565	DDX28	94	58.945	Gopherus_agassizii
ENSLAFG00000031239	DDX28	100	85.185	ENSGGOG00000001220	DDX28	100	85.185	Gorilla_gorilla
ENSLAFG00000031239	DDX28	93	49.805	ENSHBUG00000001016	ddx28	90	49.805	Haplochromis_burtoni
ENSLAFG00000031239	DDX28	94	47.195	ENSHCOG00000017590	ddx28	92	47.195	Hippocampus_comes
ENSLAFG00000031239	DDX28	93	49.323	ENSIPUG00000017350	Ddx28	89	49.323	Ictalurus_punctatus
ENSLAFG00000031239	DDX28	99	82.560	ENSSTOG00000002064	DDX28	99	82.560	Ictidomys_tridecemlineatus
ENSLAFG00000031239	DDX28	99	78.558	ENSJJAG00000012460	-	99	78.558	Jaculus_jaculus
ENSLAFG00000031239	DDX28	97	47.269	ENSKMAG00000018183	ddx28	90	48.155	Kryptolebias_marmoratus
ENSLAFG00000031239	DDX28	94	48.638	ENSLBEG00000006072	ddx28	90	48.638	Labrus_bergylta
ENSLAFG00000031239	DDX28	93	54.832	ENSLACG00000005578	DDX28	87	54.832	Latimeria_chalumnae
ENSLAFG00000031239	DDX28	93	53.411	ENSLOCG00000017604	ddx28	90	53.411	Lepisosteus_oculatus
ENSLAFG00000031239	DDX28	99	82.931	ENSMMUG00000010836	DDX28	99	82.931	Macaca_mulatta
ENSLAFG00000031239	DDX28	93	49.027	ENSMAMG00000020220	ddx28	90	49.027	Mastacembelus_armatus
ENSLAFG00000031239	DDX28	93	50.000	ENSMZEG00005009292	ddx28	90	50.000	Maylandia_zebra
ENSLAFG00000031239	DDX28	96	71.538	ENSMICG00000012346	-	95	71.456	Microcebus_murinus
ENSLAFG00000031239	DDX28	99	82.375	ENSMOCG00000009815	Ddx28	99	82.375	Microtus_ochrogaster
ENSLAFG00000031239	DDX28	94	51.060	ENSMMOG00000000270	ddx28	91	51.060	Mola_mola
ENSLAFG00000031239	DDX28	96	71.567	ENSMODG00000005303	DDX28	93	72.070	Monodelphis_domestica
ENSLAFG00000031239	DDX28	94	50.772	ENSMALG00000008864	ddx28	90	50.962	Monopterus_albus
ENSLAFG00000031239	DDX28	99	80.891	MGP_CAROLIEiJ_G0031510	Ddx28	99	80.891	Mus_caroli
ENSLAFG00000031239	DDX28	99	81.447	ENSMUSG00000045538	Ddx28	99	81.447	Mus_musculus
ENSLAFG00000031239	DDX28	99	81.447	MGP_PahariEiJ_G0023110	Ddx28	99	81.447	Mus_pahari
ENSLAFG00000031239	DDX28	99	81.076	MGP_SPRETEiJ_G0032628	Ddx28	99	81.076	Mus_spretus
ENSLAFG00000031239	DDX28	75	82.382	ENSMPUG00000006915	DDX28	100	82.382	Mustela_putorius_furo
ENSLAFG00000031239	DDX28	98	80.755	ENSMLUG00000005899	DDX28	98	80.755	Myotis_lucifugus
ENSLAFG00000031239	DDX28	96	83.205	ENSNGAG00000015762	Ddx28	95	83.431	Nannospalax_galili
ENSLAFG00000031239	DDX28	93	49.902	ENSNBRG00000001337	ddx28	91	49.902	Neolamprologus_brichardi
ENSLAFG00000031239	DDX28	93	50.389	ENSONIG00000020597	ddx28	90	50.389	Oreochromis_niloticus
ENSLAFG00000031239	DDX28	51	63.669	ENSOANG00000003551	-	96	63.669	Ornithorhynchus_anatinus
ENSLAFG00000031239	DDX28	99	83.488	ENSOCUG00000023074	DDX28	99	83.488	Oryctolagus_cuniculus
ENSLAFG00000031239	DDX28	99	48.168	ENSORLG00000011968	ddx28	91	49.611	Oryzias_latipes
ENSLAFG00000031239	DDX28	99	47.890	ENSORLG00020001951	ddx28	92	49.416	Oryzias_latipes_hni
ENSLAFG00000031239	DDX28	99	47.706	ENSORLG00015023030	ddx28	92	49.222	Oryzias_latipes_hsok
ENSLAFG00000031239	DDX28	94	49.708	ENSOMEG00000012445	ddx28	90	49.708	Oryzias_melastigma
ENSLAFG00000031239	DDX28	97	82.732	ENSOGAG00000016895	DDX28	99	82.407	Otolemur_garnettii
ENSLAFG00000031239	DDX28	82	81.348	ENSOARG00000003313	DDX28	100	81.348	Ovis_aries
ENSLAFG00000031239	DDX28	100	81.296	ENSPPAG00000036971	DDX28	100	81.296	Pan_paniscus
ENSLAFG00000031239	DDX28	99	86.271	ENSPPRG00000018322	DDX28	95	87.184	Panthera_pardus
ENSLAFG00000031239	DDX28	99	83.117	ENSPTIG00000006444	DDX28	95	83.883	Panthera_tigris_altaica
ENSLAFG00000031239	DDX28	100	84.630	ENSPTRG00000008258	DDX28	100	84.630	Pan_troglodytes
ENSLAFG00000031239	DDX28	93	50.877	ENSPKIG00000021200	ddx28	93	50.877	Paramormyrops_kingsleyae
ENSLAFG00000031239	DDX28	55	62.500	ENSPSIG00000001127	DDX28	97	62.500	Pelodiscus_sinensis
ENSLAFG00000031239	DDX28	92	46.863	ENSPMGG00000007908	ddx28	88	46.771	Periophthalmus_magnuspinnatus
ENSLAFG00000031239	DDX28	99	80.961	ENSPEMG00000003395	Ddx28	99	80.961	Peromyscus_maniculatus_bairdii
ENSLAFG00000031239	DDX28	52	47.872	ENSPMAG00000006983	DDX28	93	47.872	Petromyzon_marinus
ENSLAFG00000031239	DDX28	93	49.228	ENSPFOG00000020838	DDX28	90	49.228	Poecilia_formosa
ENSLAFG00000031239	DDX28	93	49.228	ENSPFOG00000020952	ddx28	88	49.222	Poecilia_formosa
ENSLAFG00000031239	DDX28	93	49.228	ENSPLAG00000016292	ddx28	89	49.228	Poecilia_latipinna
ENSLAFG00000031239	DDX28	93	49.228	ENSPMEG00000011311	ddx28	88	49.228	Poecilia_mexicana
ENSLAFG00000031239	DDX28	93	49.027	ENSPREG00000002899	ddx28	88	49.027	Poecilia_reticulata
ENSLAFG00000031239	DDX28	99	85.316	ENSPPYG00000007481	DDX28	100	85.316	Pongo_abelii
ENSLAFG00000031239	DDX28	100	86.137	ENSPCOG00000024632	DDX28	95	87.016	Propithecus_coquereli
ENSLAFG00000031239	DDX28	93	50.000	ENSPNYG00000018804	ddx28	90	50.000	Pundamilia_nyererei
ENSLAFG00000031239	DDX28	93	50.579	ENSPNAG00000014597	ddx28	94	50.579	Pygocentrus_nattereri
ENSLAFG00000031239	DDX28	99	79.777	ENSRNOG00000019817	Ddx28	99	79.777	Rattus_norvegicus
ENSLAFG00000031239	DDX28	93	50.674	ENSSFOG00015010181	ddx28	92	50.674	Scleropages_formosus
ENSLAFG00000031239	DDX28	88	50.916	ENSSMAG00000006831	ddx28	90	51.324	Scophthalmus_maximus
ENSLAFG00000031239	DDX28	93	48.837	ENSSDUG00000003257	ddx28	89	48.837	Seriola_dumerili
ENSLAFG00000031239	DDX28	93	48.450	ENSSLDG00000004513	ddx28	89	48.450	Seriola_lalandi_dorsalis
ENSLAFG00000031239	DDX28	100	81.296	ENSSARG00000014169	DDX28	100	81.296	Sorex_araneus
ENSLAFG00000031239	DDX28	99	47.970	ENSSPAG00000000988	ddx28	91	49.423	Stegastes_partitus
ENSLAFG00000031239	DDX28	100	85.556	ENSSSCG00000026038	DDX28	96	86.434	Sus_scrofa
ENSLAFG00000031239	DDX28	94	49.312	ENSTRUG00000007815	ddx28	92	49.312	Takifugu_rubripes
ENSLAFG00000031239	DDX28	94	49.310	ENSTNIG00000011352	ddx28	99	49.310	Tetraodon_nigroviridis
ENSLAFG00000031239	DDX28	87	86.301	ENSTBEG00000017695	DDX28	87	86.301	Tupaia_belangeri
ENSLAFG00000031239	DDX28	99	86.642	ENSUAMG00000016116	DDX28	99	86.642	Ursus_americanus
ENSLAFG00000031239	DDX28	81	87.356	ENSUMAG00000019200	DDX28	89	87.356	Ursus_maritimus
ENSLAFG00000031239	DDX28	81	82.877	ENSVVUG00000012876	DDX28	87	82.877	Vulpes_vulpes
ENSLAFG00000031239	DDX28	94	48.431	ENSXETG00000005435	ddx28	99	48.431	Xenopus_tropicalis
ENSLAFG00000031239	DDX28	93	49.130	ENSXCOG00000012364	ddx28	90	49.130	Xiphophorus_couchianus
ENSLAFG00000031239	DDX28	93	49.509	ENSXMAG00000019603	ddx28	90	49.509	Xiphophorus_maculatus