EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000031867 (Gene tree)
Gene ID: -
Gene Symbol: PRDM10
Alias: KIAA1231|MGC131802|PFM7
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 84724 bases
Position: chrscaffold_50:9965320-10050043
Accession: 13995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000025908	zf-C2H2	PF00096.26	7.5e-32	1	5
ENSLAFP00000025908	zf-C2H2	PF00096.26	7.5e-32	2	5
ENSLAFP00000025908	zf-C2H2	PF00096.26	7.5e-32	3	5
ENSLAFP00000025908	zf-C2H2	PF00096.26	7.5e-32	4	5
ENSLAFP00000025908	zf-C2H2	PF00096.26	7.5e-32	5	5
ENSLAFP00000020955	zf-C2H2	PF00096.26	2.3e-30	1	5
ENSLAFP00000020955	zf-C2H2	PF00096.26	2.3e-30	2	5
ENSLAFP00000020955	zf-C2H2	PF00096.26	2.3e-30	3	5
ENSLAFP00000020955	zf-C2H2	PF00096.26	2.3e-30	4	5
ENSLAFP00000020955	zf-C2H2	PF00096.26	2.3e-30	5	5
ENSLAFP00000025908	zf-met	PF12874.7	2.7e-07	1	2
ENSLAFP00000025908	zf-met	PF12874.7	2.7e-07	2	2
ENSLAFP00000020955	zf-met	PF12874.7	5.4e-06	1	2
ENSLAFP00000020955	zf-met	PF12874.7	5.4e-06	2	2
ENSLAFP00000025908	zf-C2H2_jaz	PF12171.8	1.9e-19	1	1
ENSLAFP00000020955	zf-C2H2_jaz	PF12171.8	1.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000034178	PRDM10-201	3318	-	ENSLAFP00000025908	1105 (aa)	-	G3UDK0
ENSLAFT00000034274	PRDM10-202	3486	-	ENSLAFP00000020955	1162 (aa)	-	G3TZE7

Gene Model

Click here to download ENSLAFG00000031867's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000031867's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000031867	PRDM10	51	34.574	ENSLAFG00000031653	-	99	35.673
ENSLAFG00000031867	PRDM10	74	35.160	ENSLAFG00000008866	PRDM15	66	35.780

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000031867	PRDM10	100	91.402	ENSG00000170325	PRDM10	100	92.775	Homo_sapiens
ENSLAFG00000031867	PRDM10	100	87.801	ENSAMEG00000002425	PRDM10	100	87.801	Ailuropoda_melanoleuca
ENSLAFG00000031867	PRDM10	100	81.950	ENSAPLG00000004858	PRDM10	100	82.121	Anas_platyrhynchos
ENSLAFG00000031867	PRDM10	100	78.388	ENSANAG00000022064	PRDM10	100	78.645	Aotus_nancymaae
ENSLAFG00000031867	PRDM10	100	90.026	ENSBTAG00000019001	PRDM10	98	92.952	Bos_taurus
ENSLAFG00000031867	PRDM10	100	91.144	ENSCJAG00000009235	PRDM10	100	91.316	Callithrix_jacchus
ENSLAFG00000031867	PRDM10	100	89.854	ENSCAFG00000010164	PRDM10	100	89.854	Canis_familiaris
ENSLAFG00000031867	PRDM10	100	89.865	ENSCAFG00020010152	PRDM10	100	89.865	Canis_lupus_dingo
ENSLAFG00000031867	PRDM10	100	89.940	ENSCHIG00000026530	PRDM10	100	89.252	Capra_hircus
ENSLAFG00000031867	PRDM10	100	92.519	ENSTSYG00000000544	PRDM10	100	92.605	Carlito_syrichta
ENSLAFG00000031867	PRDM10	100	82.653	ENSCAPG00000017296	PRDM10	100	82.823	Cavia_aperea
ENSLAFG00000031867	PRDM10	99	79.250	ENSCPOG00000000389	PRDM10	98	83.088	Cavia_porcellus
ENSLAFG00000031867	PRDM10	100	91.058	ENSCCAG00000024567	PRDM10	100	91.316	Cebus_capucinus
ENSLAFG00000031867	PRDM10	100	91.574	ENSCATG00000040031	PRDM10	100	91.574	Cercocebus_atys
ENSLAFG00000031867	PRDM10	100	88.642	ENSCLAG00000014605	PRDM10	100	89.069	Chinchilla_lanigera
ENSLAFG00000031867	PRDM10	100	91.660	ENSCSAG00000002202	PRDM10	100	91.660	Chlorocebus_sabaeus
ENSLAFG00000031867	PRDM10	100	79.735	ENSCPBG00000026880	PRDM10	99	79.404	Chrysemys_picta_bellii
ENSLAFG00000031867	PRDM10	100	91.402	ENSCANG00000032669	PRDM10	100	91.660	Colobus_angolensis_palliatus
ENSLAFG00000031867	PRDM10	100	88.165	ENSCGRG00001021647	Prdm10	98	88.336	Cricetulus_griseus_chok1gshd
ENSLAFG00000031867	PRDM10	100	88.165	ENSCGRG00000006562	Prdm10	98	88.336	Cricetulus_griseus_crigri
ENSLAFG00000031867	PRDM10	82	91.492	ENSDNOG00000001366	PRDM10	95	91.492	Dasypus_novemcinctus
ENSLAFG00000031867	PRDM10	100	89.682	ENSDORG00000014292	Prdm10	100	89.682	Dipodomys_ordii
ENSLAFG00000031867	PRDM10	100	91.316	ENSEASG00005022914	PRDM10	98	93.506	Equus_asinus_asinus
ENSLAFG00000031867	PRDM10	100	91.230	ENSECAG00000011499	PRDM10	98	93.506	Equus_caballus
ENSLAFG00000031867	PRDM10	98	91.499	ENSFCAG00000004111	PRDM10	96	91.499	Felis_catus
ENSLAFG00000031867	PRDM10	96	83.622	ENSFALG00000004873	PRDM10	100	78.708	Ficedula_albicollis
ENSLAFG00000031867	PRDM10	100	89.123	ENSFDAG00000017311	PRDM10	97	93.671	Fukomys_damarensis
ENSLAFG00000031867	PRDM10	100	79.322	ENSGALG00000033660	PRDM10	99	82.562	Gallus_gallus
ENSLAFG00000031867	PRDM10	98	60.799	ENSGACG00000012293	prdm10	98	65.432	Gasterosteus_aculeatus
ENSLAFG00000031867	PRDM10	100	80.855	ENSGAGG00000012523	PRDM10	99	80.855	Gopherus_agassizii
ENSLAFG00000031867	PRDM10	100	92.003	ENSGGOG00000015359	PRDM10	100	92.089	Gorilla_gorilla
ENSLAFG00000031867	PRDM10	100	89.219	ENSHGLG00000001106	PRDM10	100	89.389	Heterocephalus_glaber_female
ENSLAFG00000031867	PRDM10	100	89.541	ENSHGLG00100002350	PRDM10	100	89.626	Heterocephalus_glaber_male
ENSLAFG00000031867	PRDM10	100	91.745	ENSSTOG00000002015	PRDM10	100	92.003	Ictidomys_tridecemlineatus
ENSLAFG00000031867	PRDM10	100	79.156	ENSJJAG00000021493	Prdm10	100	78.892	Jaculus_jaculus
ENSLAFG00000031867	PRDM10	100	91.831	ENSMFAG00000031008	PRDM10	100	91.831	Macaca_fascicularis
ENSLAFG00000031867	PRDM10	100	91.831	ENSMMUG00000017555	PRDM10	100	91.831	Macaca_mulatta
ENSLAFG00000031867	PRDM10	100	91.745	ENSMNEG00000036493	PRDM10	100	91.745	Macaca_nemestrina
ENSLAFG00000031867	PRDM10	92	94.273	ENSMLEG00000042028	PRDM10	96	96.923	Mandrillus_leucophaeus
ENSLAFG00000031867	PRDM10	96	83.655	ENSMGAG00000001112	PRDM10	100	79.602	Meleagris_gallopavo
ENSLAFG00000031867	PRDM10	100	91.831	ENSMICG00000013888	PRDM10	100	91.831	Microcebus_murinus
ENSLAFG00000031867	PRDM10	100	86.482	ENSMOCG00000021853	Prdm10	99	93.151	Microtus_ochrogaster
ENSLAFG00000031867	PRDM10	76	87.599	ENSMODG00000004979	PRDM10	99	87.486	Monodelphis_domestica
ENSLAFG00000031867	PRDM10	100	88.889	ENSMUSG00000042496	Prdm10	100	89.068	Mus_musculus
ENSLAFG00000031867	PRDM10	100	88.412	MGP_SPRETEiJ_G0033061	-	100	88.584	Mus_spretus
ENSLAFG00000031867	PRDM10	100	91.144	ENSMPUG00000008711	PRDM10	99	91.144	Mustela_putorius_furo
ENSLAFG00000031867	PRDM10	100	89.682	ENSMLUG00000013051	PRDM10	100	89.854	Myotis_lucifugus
ENSLAFG00000031867	PRDM10	100	90.198	ENSNGAG00000000580	Prdm10	99	91.463	Nannospalax_galili
ENSLAFG00000031867	PRDM10	100	91.574	ENSNLEG00000007488	PRDM10	100	91.745	Nomascus_leucogenys
ENSLAFG00000031867	PRDM10	100	87.447	ENSODEG00000005309	PRDM10	99	94.805	Octodon_degus
ENSLAFG00000031867	PRDM10	100	77.157	ENSOANG00000000577	-	100	76.311	Ornithorhynchus_anatinus
ENSLAFG00000031867	PRDM10	100	90.112	ENSOCUG00000003736	PRDM10	100	90.284	Oryctolagus_cuniculus
ENSLAFG00000031867	PRDM10	100	91.058	ENSOGAG00000010723	PRDM10	100	91.058	Otolemur_garnettii
ENSLAFG00000031867	PRDM10	100	90.112	ENSOARG00000014507	PRDM10	100	89.424	Ovis_aries
ENSLAFG00000031867	PRDM10	100	91.831	ENSPPAG00000042881	PRDM10	100	91.917	Pan_paniscus
ENSLAFG00000031867	PRDM10	100	91.230	ENSPPRG00000007002	PRDM10	100	91.230	Panthera_pardus
ENSLAFG00000031867	PRDM10	100	91.144	ENSPTIG00000013331	PRDM10	100	91.144	Panthera_tigris_altaica
ENSLAFG00000031867	PRDM10	100	91.831	ENSPTRG00000004477	PRDM10	100	91.917	Pan_troglodytes
ENSLAFG00000031867	PRDM10	100	91.745	ENSPANG00000017470	PRDM10	100	91.745	Papio_anubis
ENSLAFG00000031867	PRDM10	100	87.500	ENSPEMG00000014985	Prdm10	100	87.500	Peromyscus_maniculatus_bairdii
ENSLAFG00000031867	PRDM10	100	91.660	ENSPPYG00000004061	PRDM10	100	91.745	Pongo_abelii
ENSLAFG00000031867	PRDM10	92	83.520	ENSPCAG00000014514	PRDM10	100	83.706	Procavia_capensis
ENSLAFG00000031867	PRDM10	100	78.232	ENSPCOG00000023406	PRDM10	100	78.302	Propithecus_coquereli
ENSLAFG00000031867	PRDM10	100	91.230	ENSPVAG00000012764	PRDM10	100	91.402	Pteropus_vampyrus
ENSLAFG00000031867	PRDM10	100	88.498	ENSRNOG00000007853	Prdm10	100	88.670	Rattus_norvegicus
ENSLAFG00000031867	PRDM10	100	91.831	ENSRBIG00000030924	PRDM10	100	91.917	Rhinopithecus_bieti
ENSLAFG00000031867	PRDM10	100	91.831	ENSRROG00000034334	PRDM10	100	91.917	Rhinopithecus_roxellana
ENSLAFG00000031867	PRDM10	100	91.316	ENSSBOG00000008773	PRDM10	100	91.402	Saimiri_boliviensis_boliviensis
ENSLAFG00000031867	PRDM10	99	85.043	ENSSHAG00000004503	PRDM10	99	85.299	Sarcophilus_harrisii
ENSLAFG00000031867	PRDM10	68	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSLAFG00000031867	PRDM10	100	80.677	ENSSPUG00000001178	PRDM10	99	81.211	Sphenodon_punctatus
ENSLAFG00000031867	PRDM10	100	89.546	ENSSSCG00000015243	PRDM10	100	90.069	Sus_scrofa
ENSLAFG00000031867	PRDM10	100	80.887	ENSTGUG00000000530	PRDM10	100	80.973	Taeniopygia_guttata
ENSLAFG00000031867	PRDM10	94	88.274	ENSTBEG00000007221	PRDM10	94	88.274	Tupaia_belangeri
ENSLAFG00000031867	PRDM10	100	88.306	ENSTTRG00000009189	PRDM10	100	87.360	Tursiops_truncatus
ENSLAFG00000031867	PRDM10	93	88.676	ENSUAMG00000018832	PRDM10	97	89.749	Ursus_americanus
ENSLAFG00000031867	PRDM10	100	88.955	ENSUMAG00000003167	PRDM10	99	91.463	Ursus_maritimus
ENSLAFG00000031867	PRDM10	100	91.230	ENSVVUG00000019878	PRDM10	100	91.230	Vulpes_vulpes
ENSLAFG00000031867	PRDM10	99	71.342	ENSXETG00000032173	PRDM10	100	65.534	Xenopus_tropicalis