EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000032216 (Gene tree)
Gene ID: -
Gene Symbol: TRMT6
Alias: CGI-09|GCD10|Gcd10p|MGC5029
Full Name: tRNA methyltransferase 6
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 11568 bases
Position: chrscaffold_19:24278153-24289720
Accession: 20900
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000018589	Gcd10p	PF04189.13	7.6e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000037503	TRMT6-201	1494	-	ENSLAFP00000018589	497 (aa)	-	G3TSN1

Gene Model

Click here to download ENSLAFG00000032216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000032216's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000032216	TRMT6	99	90.927	ENSG00000089195	TRMT6	100	91.743	Homo_sapiens
ENSLAFG00000032216	TRMT6	96	59.916	ENSAPOG00000008036	trmt6	97	59.708	Acanthochromis_polyacanthus
ENSLAFG00000032216	TRMT6	98	91.820	ENSAMEG00000010635	TRMT6	98	91.820	Ailuropoda_melanoleuca
ENSLAFG00000032216	TRMT6	95	55.579	ENSACIG00000004608	trmt6	96	55.579	Amphilophus_citrinellus
ENSLAFG00000032216	TRMT6	97	56.965	ENSAOCG00000024322	trmt6	98	56.846	Amphiprion_ocellaris
ENSLAFG00000032216	TRMT6	97	58.678	ENSAPEG00000017334	trmt6	98	58.678	Amphiprion_percula
ENSLAFG00000032216	TRMT6	92	58.606	ENSATEG00000018498	trmt6	97	59.041	Anabas_testudineus
ENSLAFG00000032216	TRMT6	91	76.096	ENSAPLG00000007761	TRMT6	99	76.096	Anas_platyrhynchos
ENSLAFG00000032216	TRMT6	96	69.247	ENSACAG00000000575	TRMT6	98	69.247	Anolis_carolinensis
ENSLAFG00000032216	TRMT6	99	90.524	ENSANAG00000021260	TRMT6	99	90.524	Aotus_nancymaae
ENSLAFG00000032216	TRMT6	98	55.510	ENSACLG00000026034	trmt6	98	55.510	Astatotilapia_calliptera
ENSLAFG00000032216	TRMT6	95	57.983	ENSAMXG00000017116	trmt6	95	58.700	Astyanax_mexicanus
ENSLAFG00000032216	TRMT6	99	90.726	ENSBTAG00000001314	TRMT6	99	90.726	Bos_taurus
ENSLAFG00000032216	TRMT6	99	90.323	ENSCJAG00000021296	TRMT6	99	90.323	Callithrix_jacchus
ENSLAFG00000032216	TRMT6	98	91.786	ENSCAFG00000005969	TRMT6	98	91.786	Canis_familiaris
ENSLAFG00000032216	TRMT6	98	91.992	ENSCAFG00020000777	TRMT6	98	91.992	Canis_lupus_dingo
ENSLAFG00000032216	TRMT6	99	90.323	ENSCHIG00000010338	TRMT6	99	90.323	Capra_hircus
ENSLAFG00000032216	TRMT6	99	90.283	ENSTSYG00000004286	TRMT6	99	90.283	Carlito_syrichta
ENSLAFG00000032216	TRMT6	83	85.266	ENSCAPG00000015467	TRMT6	93	85.266	Cavia_aperea
ENSLAFG00000032216	TRMT6	99	85.628	ENSCPOG00000013809	TRMT6	99	85.628	Cavia_porcellus
ENSLAFG00000032216	TRMT6	99	90.121	ENSCCAG00000026939	TRMT6	99	90.121	Cebus_capucinus
ENSLAFG00000032216	TRMT6	99	90.726	ENSCATG00000041111	TRMT6	99	90.726	Cercocebus_atys
ENSLAFG00000032216	TRMT6	99	87.143	ENSCLAG00000013978	TRMT6	99	87.143	Chinchilla_lanigera
ENSLAFG00000032216	TRMT6	99	90.726	ENSCSAG00000013461	TRMT6	99	90.726	Chlorocebus_sabaeus
ENSLAFG00000032216	TRMT6	82	81.215	ENSCHOG00000012537	TRMT6	81	81.215	Choloepus_hoffmanni
ENSLAFG00000032216	TRMT6	96	75.783	ENSCPBG00000023406	TRMT6	98	75.992	Chrysemys_picta_bellii
ENSLAFG00000032216	TRMT6	90	34.267	ENSCING00000002472	-	96	33.853	Ciona_intestinalis
ENSLAFG00000032216	TRMT6	87	38.826	ENSCSAVG00000001680	-	94	38.140	Ciona_savignyi
ENSLAFG00000032216	TRMT6	99	90.524	ENSCANG00000002381	TRMT6	99	90.524	Colobus_angolensis_palliatus
ENSLAFG00000032216	TRMT6	99	85.685	ENSCGRG00001003385	Trmt6	99	85.685	Cricetulus_griseus_chok1gshd
ENSLAFG00000032216	TRMT6	99	85.685	ENSCGRG00000006540	Trmt6	99	85.685	Cricetulus_griseus_crigri
ENSLAFG00000032216	TRMT6	96	58.873	ENSCSEG00000002228	trmt6	98	59.167	Cynoglossus_semilaevis
ENSLAFG00000032216	TRMT6	97	56.879	ENSCVAG00000000341	trmt6	98	56.879	Cyprinodon_variegatus
ENSLAFG00000032216	TRMT6	97	58.316	ENSDARG00000042344	trmt6	97	58.316	Danio_rerio
ENSLAFG00000032216	TRMT6	98	82.897	ENSDNOG00000012785	TRMT6	99	82.897	Dasypus_novemcinctus
ENSLAFG00000032216	TRMT6	98	87.269	ENSDORG00000006458	Trmt6	98	87.269	Dipodomys_ordii
ENSLAFG00000032216	TRMT6	65	52.778	ENSETEG00000017282	-	95	52.778	Echinops_telfairi
ENSLAFG00000032216	TRMT6	58	94.697	ENSETEG00000003490	-	58	94.697	Echinops_telfairi
ENSLAFG00000032216	TRMT6	97	92.931	ENSEASG00005001411	TRMT6	99	92.229	Equus_asinus_asinus
ENSLAFG00000032216	TRMT6	97	92.723	ENSECAG00000023914	TRMT6	99	91.129	Equus_caballus
ENSLAFG00000032216	TRMT6	99	88.485	ENSEEUG00000006635	TRMT6	99	88.485	Erinaceus_europaeus
ENSLAFG00000032216	TRMT6	96	58.836	ENSELUG00000013378	trmt6	78	60.398	Esox_lucius
ENSLAFG00000032216	TRMT6	98	92.025	ENSFCAG00000003102	TRMT6	98	92.025	Felis_catus
ENSLAFG00000032216	TRMT6	90	74.779	ENSFALG00000013575	TRMT6	97	75.000	Ficedula_albicollis
ENSLAFG00000032216	TRMT6	99	86.694	ENSFDAG00000015117	TRMT6	99	86.694	Fukomys_damarensis
ENSLAFG00000032216	TRMT6	96	57.851	ENSFHEG00000019957	trmt6	97	57.851	Fundulus_heteroclitus
ENSLAFG00000032216	TRMT6	81	64.567	ENSGMOG00000011059	trmt6	97	64.567	Gadus_morhua
ENSLAFG00000032216	TRMT6	95	73.529	ENSGALG00000009169	TRMT6	97	73.529	Gallus_gallus
ENSLAFG00000032216	TRMT6	97	56.701	ENSGAFG00000008618	trmt6	98	56.584	Gambusia_affinis
ENSLAFG00000032216	TRMT6	96	55.115	ENSGACG00000012471	trmt6	96	55.115	Gasterosteus_aculeatus
ENSLAFG00000032216	TRMT6	96	75.365	ENSGAGG00000008464	TRMT6	99	75.439	Gopherus_agassizii
ENSLAFG00000032216	TRMT6	99	90.927	ENSGGOG00000008597	TRMT6	99	90.927	Gorilla_gorilla
ENSLAFG00000032216	TRMT6	98	55.510	ENSHBUG00000016631	trmt6	99	55.510	Haplochromis_burtoni
ENSLAFG00000032216	TRMT6	99	85.685	ENSHGLG00000015405	TRMT6	99	85.685	Heterocephalus_glaber_female
ENSLAFG00000032216	TRMT6	99	85.685	ENSHGLG00100004120	TRMT6	99	85.685	Heterocephalus_glaber_male
ENSLAFG00000032216	TRMT6	96	58.178	ENSHCOG00000000118	trmt6	98	58.178	Hippocampus_comes
ENSLAFG00000032216	TRMT6	95	60.587	ENSIPUG00000019365	trmt6	97	60.504	Ictalurus_punctatus
ENSLAFG00000032216	TRMT6	99	86.290	ENSSTOG00000006863	TRMT6	99	86.290	Ictidomys_tridecemlineatus
ENSLAFG00000032216	TRMT6	98	85.155	ENSJJAG00000007315	Trmt6	97	85.155	Jaculus_jaculus
ENSLAFG00000032216	TRMT6	95	57.620	ENSKMAG00000001295	trmt6	97	58.246	Kryptolebias_marmoratus
ENSLAFG00000032216	TRMT6	96	56.159	ENSLBEG00000025654	trmt6	98	56.159	Labrus_bergylta
ENSLAFG00000032216	TRMT6	98	68.089	ENSLACG00000016478	TRMT6	99	68.089	Latimeria_chalumnae
ENSLAFG00000032216	TRMT6	96	65.344	ENSLOCG00000016451	trmt6	97	65.344	Lepisosteus_oculatus
ENSLAFG00000032216	TRMT6	99	90.524	ENSMFAG00000044360	TRMT6	99	90.524	Macaca_fascicularis
ENSLAFG00000032216	TRMT6	99	90.524	ENSMMUG00000013728	TRMT6	99	90.524	Macaca_mulatta
ENSLAFG00000032216	TRMT6	99	90.323	ENSMNEG00000041831	TRMT6	99	90.323	Macaca_nemestrina
ENSLAFG00000032216	TRMT6	99	90.726	ENSMLEG00000040762	TRMT6	99	90.726	Mandrillus_leucophaeus
ENSLAFG00000032216	TRMT6	96	58.230	ENSMAMG00000012101	trmt6	98	58.230	Mastacembelus_armatus
ENSLAFG00000032216	TRMT6	98	55.510	ENSMZEG00005010771	trmt6	98	55.510	Maylandia_zebra
ENSLAFG00000032216	TRMT6	95	73.529	ENSMGAG00000007678	TRMT6	97	73.529	Meleagris_gallopavo
ENSLAFG00000032216	TRMT6	99	85.887	ENSMAUG00000008719	Trmt6	99	85.887	Mesocricetus_auratus
ENSLAFG00000032216	TRMT6	97	92.100	ENSMICG00000011626	TRMT6	99	90.524	Microcebus_murinus
ENSLAFG00000032216	TRMT6	99	85.081	ENSMOCG00000022320	Trmt6	99	85.081	Microtus_ochrogaster
ENSLAFG00000032216	TRMT6	96	52.917	ENSMMOG00000004412	trmt6	97	52.917	Mola_mola
ENSLAFG00000032216	TRMT6	97	79.876	ENSMODG00000003784	TRMT6	97	79.876	Monodelphis_domestica
ENSLAFG00000032216	TRMT6	96	54.658	ENSMALG00000018140	trmt6	97	54.658	Monopterus_albus
ENSLAFG00000032216	TRMT6	99	83.300	MGP_CAROLIEiJ_G0024344	Trmt6	99	83.300	Mus_caroli
ENSLAFG00000032216	TRMT6	99	83.903	ENSMUSG00000037376	Trmt6	99	83.903	Mus_musculus
ENSLAFG00000032216	TRMT6	99	84.909	MGP_PahariEiJ_G0025789	Trmt6	99	84.909	Mus_pahari
ENSLAFG00000032216	TRMT6	99	83.903	MGP_SPRETEiJ_G0025264	Trmt6	99	83.903	Mus_spretus
ENSLAFG00000032216	TRMT6	85	91.274	ENSMPUG00000006317	TRMT6	91	91.274	Mustela_putorius_furo
ENSLAFG00000032216	TRMT6	97	91.684	ENSMLUG00000006491	TRMT6	99	90.323	Myotis_lucifugus
ENSLAFG00000032216	TRMT6	98	83.573	ENSNGAG00000015251	Trmt6	98	83.573	Nannospalax_galili
ENSLAFG00000032216	TRMT6	98	51.844	ENSNBRG00000020261	trmt6	98	51.844	Neolamprologus_brichardi
ENSLAFG00000032216	TRMT6	99	90.726	ENSNLEG00000013957	TRMT6	99	90.726	Nomascus_leucogenys
ENSLAFG00000032216	TRMT6	84	80.952	ENSMEUG00000009179	TRMT6	99	80.952	Notamacropus_eugenii
ENSLAFG00000032216	TRMT6	97	88.773	ENSOPRG00000008564	TRMT6	98	88.773	Ochotona_princeps
ENSLAFG00000032216	TRMT6	99	87.097	ENSODEG00000005657	TRMT6	99	87.097	Octodon_degus
ENSLAFG00000032216	TRMT6	98	55.894	ENSONIG00000000968	trmt6	99	55.894	Oreochromis_niloticus
ENSLAFG00000032216	TRMT6	91	78.462	ENSOANG00000008403	-	99	78.462	Ornithorhynchus_anatinus
ENSLAFG00000032216	TRMT6	99	90.524	ENSOCUG00000014669	TRMT6	99	90.524	Oryctolagus_cuniculus
ENSLAFG00000032216	TRMT6	96	56.341	ENSORLG00000009862	trmt6	97	56.341	Oryzias_latipes
ENSLAFG00000032216	TRMT6	96	55.833	ENSORLG00020001466	trmt6	97	55.833	Oryzias_latipes_hni
ENSLAFG00000032216	TRMT6	96	56.042	ENSORLG00015015552	trmt6	97	56.250	Oryzias_latipes_hsok
ENSLAFG00000032216	TRMT6	95	54.393	ENSOMEG00000019874	trmt6	96	54.393	Oryzias_melastigma
ENSLAFG00000032216	TRMT6	97	90.041	ENSOGAG00000012950	TRMT6	98	89.592	Otolemur_garnettii
ENSLAFG00000032216	TRMT6	99	90.323	ENSOARG00000017993	TRMT6	99	90.323	Ovis_aries
ENSLAFG00000032216	TRMT6	99	90.141	ENSPPAG00000036809	TRMT6	99	90.141	Pan_paniscus
ENSLAFG00000032216	TRMT6	98	92.025	ENSPPRG00000000424	TRMT6	98	92.025	Panthera_pardus
ENSLAFG00000032216	TRMT6	98	92.025	ENSPTIG00000010629	TRMT6	98	92.025	Panthera_tigris_altaica
ENSLAFG00000032216	TRMT6	99	90.927	ENSPTRG00000013231	TRMT6	100	91.743	Pan_troglodytes
ENSLAFG00000032216	TRMT6	99	90.927	ENSPANG00000009284	TRMT6	99	90.927	Papio_anubis
ENSLAFG00000032216	TRMT6	96	60.251	ENSPKIG00000003441	trmt6	97	60.251	Paramormyrops_kingsleyae
ENSLAFG00000032216	TRMT6	95	75.472	ENSPSIG00000017048	TRMT6	97	75.472	Pelodiscus_sinensis
ENSLAFG00000032216	TRMT6	86	57.077	ENSPMGG00000021074	trmt6	92	58.652	Periophthalmus_magnuspinnatus
ENSLAFG00000032216	TRMT6	97	86.307	ENSPEMG00000023268	Trmt6	97	86.307	Peromyscus_maniculatus_bairdii
ENSLAFG00000032216	TRMT6	99	79.472	ENSPCIG00000001546	TRMT6	94	80.498	Phascolarctos_cinereus
ENSLAFG00000032216	TRMT6	97	57.025	ENSPFOG00000003037	trmt6	98	56.907	Poecilia_formosa
ENSLAFG00000032216	TRMT6	97	56.495	ENSPLAG00000005143	trmt6	98	55.967	Poecilia_latipinna
ENSLAFG00000032216	TRMT6	97	56.907	ENSPMEG00000014875	trmt6	98	56.379	Poecilia_mexicana
ENSLAFG00000032216	TRMT6	97	53.015	ENSPREG00000016227	trmt6	98	53.734	Poecilia_reticulata
ENSLAFG00000032216	TRMT6	99	90.726	ENSPPYG00000010691	TRMT6	99	90.726	Pongo_abelii
ENSLAFG00000032216	TRMT6	98	93.712	ENSPCAG00000012098	TRMT6	99	93.712	Procavia_capensis
ENSLAFG00000032216	TRMT6	97	91.701	ENSPCOG00000020723	TRMT6	99	90.141	Propithecus_coquereli
ENSLAFG00000032216	TRMT6	99	86.061	ENSPVAG00000007539	TRMT6	99	86.061	Pteropus_vampyrus
ENSLAFG00000032216	TRMT6	95	55.042	ENSPNYG00000000918	trmt6	97	55.042	Pundamilia_nyererei
ENSLAFG00000032216	TRMT6	95	59.958	ENSPNAG00000019279	trmt6	95	59.958	Pygocentrus_nattereri
ENSLAFG00000032216	TRMT6	99	84.306	ENSRNOG00000021270	Trmt6	99	84.306	Rattus_norvegicus
ENSLAFG00000032216	TRMT6	99	89.315	ENSRBIG00000031132	TRMT6	99	89.315	Rhinopithecus_bieti
ENSLAFG00000032216	TRMT6	99	90.524	ENSRROG00000045329	TRMT6	99	90.524	Rhinopithecus_roxellana
ENSLAFG00000032216	TRMT6	93	83.453	ENSSBOG00000019803	-	99	83.453	Saimiri_boliviensis_boliviensis
ENSLAFG00000032216	TRMT6	99	90.121	ENSSBOG00000033602	-	99	90.121	Saimiri_boliviensis_boliviensis
ENSLAFG00000032216	TRMT6	99	78.947	ENSSHAG00000010754	TRMT6	97	78.947	Sarcophilus_harrisii
ENSLAFG00000032216	TRMT6	99	61.741	ENSSFOG00015008429	trmt6	99	59.919	Scleropages_formosus
ENSLAFG00000032216	TRMT6	96	57.143	ENSSMAG00000005352	trmt6	98	57.557	Scophthalmus_maximus
ENSLAFG00000032216	TRMT6	99	58.182	ENSSDUG00000008294	trmt6	99	58.384	Seriola_dumerili
ENSLAFG00000032216	TRMT6	99	58.586	ENSSLDG00000002180	trmt6	99	58.669	Seriola_lalandi_dorsalis
ENSLAFG00000032216	TRMT6	97	84.823	ENSSARG00000005487	TRMT6	99	83.065	Sorex_araneus
ENSLAFG00000032216	TRMT6	95	58.996	ENSSPAG00000011628	trmt6	98	58.678	Stegastes_partitus
ENSLAFG00000032216	TRMT6	99	89.718	ENSSSCG00000007046	TRMT6	72	89.718	Sus_scrofa
ENSLAFG00000032216	TRMT6	95	74.160	ENSTGUG00000002195	TRMT6	97	75.420	Taeniopygia_guttata
ENSLAFG00000032216	TRMT6	94	54.757	ENSTRUG00000007153	trmt6	97	54.757	Takifugu_rubripes
ENSLAFG00000032216	TRMT6	94	57.384	ENSTNIG00000010726	TRMT6	98	57.384	Tetraodon_nigroviridis
ENSLAFG00000032216	TRMT6	74	90.968	ENSTBEG00000016317	TRMT6	74	90.968	Tupaia_belangeri
ENSLAFG00000032216	TRMT6	99	90.726	ENSTTRG00000012889	TRMT6	99	90.726	Tursiops_truncatus
ENSLAFG00000032216	TRMT6	98	91.207	ENSUAMG00000008674	TRMT6	98	91.207	Ursus_americanus
ENSLAFG00000032216	TRMT6	98	92.025	ENSUMAG00000004999	TRMT6	98	92.025	Ursus_maritimus
ENSLAFG00000032216	TRMT6	99	90.020	ENSVPAG00000002371	TRMT6	99	90.020	Vicugna_pacos
ENSLAFG00000032216	TRMT6	98	91.992	ENSVVUG00000023370	TRMT6	98	91.992	Vulpes_vulpes
ENSLAFG00000032216	TRMT6	96	65.975	ENSXETG00000004501	trmt6	98	65.975	Xenopus_tropicalis
ENSLAFG00000032216	TRMT6	97	52.391	ENSXCOG00000007761	trmt6	98	52.282	Xiphophorus_couchianus
ENSLAFG00000032216	TRMT6	97	56.432	ENSXMAG00000008592	trmt6	98	56.315	Xiphophorus_maculatus