EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000032250 (Gene tree)
Gene ID: -
Gene Symbol: GPATCH8
Alias: GPATC8|KIAA0553
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 73818 bases
Position: chrscaffold_31:25594309-25668126
Accession: 100654711
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000018097	zf-C2H2_jaz	PF12171.8	1.9e-06	1	1
ENSLAFP00000028149	zf-C2H2_jaz	PF12171.8	2e-06	1	1
ENSLAFP00000018097	G-patch	PF01585.23	2e-13	1	1
ENSLAFP00000028149	G-patch	PF01585.23	2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000028490	GPATCH8-201	3801	XM_010594515	ENSLAFP00000028149	1267 (aa)	XP_010592817	G3UJZ0
ENSLAFT00000026744	GPATCH8-202	3705	-	ENSLAFP00000018097	1235 (aa)	-	G3TR89

Gene Model

Click here to download ENSLAFG00000032250's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000032250's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000032250	GPATCH8	100	90.809	ENSG00000186566	GPATCH8	93	97.573	Homo_sapiens
ENSLAFG00000032250	GPATCH8	99	90.802	ENSAMEG00000018376	GPATCH8	85	90.652	Ailuropoda_melanoleuca
ENSLAFG00000032250	GPATCH8	66	65.006	ENSAPLG00000003095	GPATCH8	54	64.684	Anas_platyrhynchos
ENSLAFG00000032250	GPATCH8	99	59.735	ENSACAG00000012522	GPATCH8	52	55.488	Anolis_carolinensis
ENSLAFG00000032250	GPATCH8	100	90.723	ENSANAG00000032773	GPATCH8	85	90.881	Aotus_nancymaae
ENSLAFG00000032250	GPATCH8	100	90.461	ENSBTAG00000038316	GPATCH8	85	89.679	Bos_taurus
ENSLAFG00000032250	GPATCH8	100	89.623	ENSCJAG00000009807	GPATCH8	85	89.701	Callithrix_jacchus
ENSLAFG00000032250	GPATCH8	100	90.809	ENSCAFG00000014136	GPATCH8	85	90.652	Canis_familiaris
ENSLAFG00000032250	GPATCH8	100	90.809	ENSCAFG00020009830	GPATCH8	85	90.652	Canis_lupus_dingo
ENSLAFG00000032250	GPATCH8	100	90.603	ENSCHIG00000008962	GPATCH8	85	90.055	Capra_hircus
ENSLAFG00000032250	GPATCH8	100	85.345	ENSTSYG00000033153	GPATCH8	87	86.442	Carlito_syrichta
ENSLAFG00000032250	GPATCH8	100	90.181	ENSCCAG00000030686	GPATCH8	85	90.573	Cebus_capucinus
ENSLAFG00000032250	GPATCH8	100	90.645	ENSCATG00000028156	GPATCH8	85	90.645	Cercocebus_atys
ENSLAFG00000032250	GPATCH8	58	71.071	ENSCLAG00000016710	GPATCH8	51	71.274	Chinchilla_lanigera
ENSLAFG00000032250	GPATCH8	100	90.566	ENSCSAG00000003586	GPATCH8	85	90.566	Chlorocebus_sabaeus
ENSLAFG00000032250	GPATCH8	99	65.062	ENSCPBG00000008955	GPATCH8	72	60.584	Chrysemys_picta_bellii
ENSLAFG00000032250	GPATCH8	100	90.102	ENSCANG00000039731	GPATCH8	85	90.338	Colobus_angolensis_palliatus
ENSLAFG00000032250	GPATCH8	100	86.129	ENSCGRG00001020210	Gpatch8	84	86.050	Cricetulus_griseus_chok1gshd
ENSLAFG00000032250	GPATCH8	100	86.129	ENSCGRG00000017090	Gpatch8	84	86.050	Cricetulus_griseus_crigri
ENSLAFG00000032250	GPATCH8	100	89.412	ENSDNOG00000005102	GPATCH8	85	88.627	Dasypus_novemcinctus
ENSLAFG00000032250	GPATCH8	100	88.663	ENSDORG00000027664	Gpatch8	85	88.663	Dipodomys_ordii
ENSLAFG00000032250	GPATCH8	100	86.987	ENSETEG00000001325	GPATCH8	85	86.987	Echinops_telfairi
ENSLAFG00000032250	GPATCH8	100	92.205	ENSEASG00005010264	GPATCH8	78	92.205	Equus_asinus_asinus
ENSLAFG00000032250	GPATCH8	100	92.283	ENSECAG00000040232	GPATCH8	84	92.283	Equus_caballus
ENSLAFG00000032250	GPATCH8	93	100.000	ENSEEUG00000008586	GPATCH8	78	100.000	Erinaceus_europaeus
ENSLAFG00000032250	GPATCH8	67	89.518	ENSFCAG00000043334	GPATCH8	56	89.759	Felis_catus
ENSLAFG00000032250	GPATCH8	99	63.101	ENSFALG00000009554	GPATCH8	52	63.556	Ficedula_albicollis
ENSLAFG00000032250	GPATCH8	99	60.031	ENSGALG00000041556	GPATCH8	52	62.791	Gallus_gallus
ENSLAFG00000032250	GPATCH8	100	64.591	ENSGAGG00000008358	GPATCH8	54	62.607	Gopherus_agassizii
ENSLAFG00000032250	GPATCH8	100	88.452	ENSGGOG00000013860	GPATCH8	85	88.915	Gorilla_gorilla
ENSLAFG00000032250	GPATCH8	100	72.642	ENSHGLG00000017687	GPATCH8	54	70.588	Heterocephalus_glaber_female
ENSLAFG00000032250	GPATCH8	72	79.180	ENSHGLG00100010738	GPATCH8	83	79.355	Heterocephalus_glaber_male
ENSLAFG00000032250	GPATCH8	100	89.185	ENSSTOG00000025022	GPATCH8	85	88.950	Ictidomys_tridecemlineatus
ENSLAFG00000032250	GPATCH8	100	85.837	ENSJJAG00000017797	Gpatch8	85	85.994	Jaculus_jaculus
ENSLAFG00000032250	GPATCH8	99	53.272	ENSLACG00000017530	GPATCH8	54	56.679	Latimeria_chalumnae
ENSLAFG00000032250	GPATCH8	100	90.723	ENSMFAG00000039126	GPATCH8	85	90.723	Macaca_fascicularis
ENSLAFG00000032250	GPATCH8	100	90.723	ENSMMUG00000012658	GPATCH8	85	90.723	Macaca_mulatta
ENSLAFG00000032250	GPATCH8	100	90.645	ENSMNEG00000031426	GPATCH8	85	90.645	Macaca_nemestrina
ENSLAFG00000032250	GPATCH8	100	90.723	ENSMLEG00000038860	GPATCH8	85	90.723	Mandrillus_leucophaeus
ENSLAFG00000032250	GPATCH8	100	86.922	ENSMAUG00000021770	Gpatch8	85	86.844	Mesocricetus_auratus
ENSLAFG00000032250	GPATCH8	100	87.893	ENSMICG00000028586	GPATCH8	85	89.151	Microcebus_murinus
ENSLAFG00000032250	GPATCH8	99	85.078	ENSMOCG00000001658	Gpatch8	85	85.156	Microtus_ochrogaster
ENSLAFG00000032250	GPATCH8	100	79.359	ENSMODG00000011442	GPATCH8	85	79.186	Monodelphis_domestica
ENSLAFG00000032250	GPATCH8	100	86.250	MGP_CAROLIEiJ_G0017255	Gpatch8	85	86.484	Mus_caroli
ENSLAFG00000032250	GPATCH8	100	86.630	ENSMUSG00000034621	Gpatch8	85	86.630	Mus_musculus
ENSLAFG00000032250	GPATCH8	100	86.059	MGP_PahariEiJ_G0018385	Gpatch8	72	85.978	Mus_pahari
ENSLAFG00000032250	GPATCH8	100	86.293	MGP_SPRETEiJ_G0018098	Gpatch8	72	88.192	Mus_spretus
ENSLAFG00000032250	GPATCH8	100	89.631	ENSMPUG00000009274	GPATCH8	85	89.866	Mustela_putorius_furo
ENSLAFG00000032250	GPATCH8	97	88.862	ENSMLUG00000013840	GPATCH8	89	87.490	Myotis_lucifugus
ENSLAFG00000032250	GPATCH8	100	87.647	ENSNGAG00000021860	Gpatch8	54	86.258	Nannospalax_galili
ENSLAFG00000032250	GPATCH8	88	79.646	ENSMEUG00000011799	GPATCH8	97	79.204	Notamacropus_eugenii
ENSLAFG00000032250	GPATCH8	100	79.308	ENSOPRG00000008816	GPATCH8	85	79.465	Ochotona_princeps
ENSLAFG00000032250	GPATCH8	94	75.472	ENSODEG00000018121	GPATCH8	53	70.604	Octodon_degus
ENSLAFG00000032250	GPATCH8	100	87.745	ENSOCUG00000003291	GPATCH8	85	87.903	Oryctolagus_cuniculus
ENSLAFG00000032250	GPATCH8	98	87.871	ENSOGAG00000033643	GPATCH8	85	88.996	Otolemur_garnettii
ENSLAFG00000032250	GPATCH8	100	90.603	ENSOARG00000008370	GPATCH8	88	90.055	Ovis_aries
ENSLAFG00000032250	GPATCH8	100	90.573	ENSPPAG00000040523	GPATCH8	85	90.966	Pan_paniscus
ENSLAFG00000032250	GPATCH8	100	91.359	ENSPPRG00000023310	GPATCH8	85	91.202	Panthera_pardus
ENSLAFG00000032250	GPATCH8	100	89.631	ENSPTIG00000020001	GPATCH8	85	89.238	Panthera_tigris_altaica
ENSLAFG00000032250	GPATCH8	100	90.652	ENSPTRG00000009278	GPATCH8	85	91.045	Pan_troglodytes
ENSLAFG00000032250	GPATCH8	100	90.645	ENSPANG00000021304	GPATCH8	85	90.645	Papio_anubis
ENSLAFG00000032250	GPATCH8	99	63.276	ENSPSIG00000006255	GPATCH8	74	61.893	Pelodiscus_sinensis
ENSLAFG00000032250	GPATCH8	100	86.453	ENSPEMG00000008337	Gpatch8	85	86.139	Peromyscus_maniculatus_bairdii
ENSLAFG00000032250	GPATCH8	95	78.153	ENSPCIG00000019927	GPATCH8	85	77.494	Phascolarctos_cinereus
ENSLAFG00000032250	GPATCH8	100	89.858	ENSPPYG00000008329	GPATCH8	85	90.016	Pongo_abelii
ENSLAFG00000032250	GPATCH8	75	100.000	ENSPCAG00000004441	GPATCH8	63	100.000	Procavia_capensis
ENSLAFG00000032250	GPATCH8	98	89.398	ENSPCOG00000019209	GPATCH8	84	89.799	Propithecus_coquereli
ENSLAFG00000032250	GPATCH8	100	87.206	ENSPVAG00000003155	GPATCH8	85	88.226	Pteropus_vampyrus
ENSLAFG00000032250	GPATCH8	100	84.484	ENSRNOG00000021044	Gpatch8	72	85.662	Rattus_norvegicus
ENSLAFG00000032250	GPATCH8	100	89.866	ENSRBIG00000033713	GPATCH8	85	90.102	Rhinopithecus_bieti
ENSLAFG00000032250	GPATCH8	100	89.866	ENSRROG00000029623	GPATCH8	85	90.102	Rhinopithecus_roxellana
ENSLAFG00000032250	GPATCH8	100	90.495	ENSSBOG00000023544	GPATCH8	85	90.888	Saimiri_boliviensis_boliviensis
ENSLAFG00000032250	GPATCH8	100	78.795	ENSSHAG00000016140	GPATCH8	85	78.326	Sarcophilus_harrisii
ENSLAFG00000032250	GPATCH8	100	86.107	ENSSARG00000007516	GPATCH8	85	86.656	Sorex_araneus
ENSLAFG00000032250	GPATCH8	61	58.793	ENSSPUG00000011251	GPATCH8	52	57.596	Sphenodon_punctatus
ENSLAFG00000032250	GPATCH8	100	90.838	ENSSSCG00000017357	ITGA2B	85	89.439	Sus_scrofa
ENSLAFG00000032250	GPATCH8	89	92.381	ENSTBEG00000009486	GPATCH8	76	92.381	Tupaia_belangeri
ENSLAFG00000032250	GPATCH8	99	85.658	ENSTTRG00000010527	GPATCH8	55	87.853	Tursiops_truncatus
ENSLAFG00000032250	GPATCH8	95	87.666	ENSUMAG00000013891	GPATCH8	53	89.362	Ursus_maritimus
ENSLAFG00000032250	GPATCH8	100	89.742	ENSVPAG00000006937	GPATCH8	60	88.494	Vicugna_pacos
ENSLAFG00000032250	GPATCH8	100	90.731	ENSVVUG00000017996	GPATCH8	85	90.652	Vulpes_vulpes