EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000032290 (Gene tree)
Gene ID: -
Gene Symbol: POLR1D
Alias: MGC9850|RPA16|RPA9|RPAC2|RPO1-3
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 1651 bases
Position: chrscaffold_29:13480248-13481898
Accession: 20422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000027518	RNA_pol_L_2	PF13656.6	1.1e-28	1	1
ENSLAFP00000027518	RNA_pol_L	PF01193.24	2.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000035227	POLR1D-201	399	-	ENSLAFP00000027518	133 (aa)	-	G3UI60

Gene Model

Click here to download ENSLAFG00000032290's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000032290's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000032290	POLR1D	76	34.653	ENSLAFG00000021507	-	84	34.653

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000032290	POLR1D	100	89.474	ENSG00000186184	POLR1D	100	91.379	Homo_sapiens
ENSLAFG00000032290	POLR1D	83	67.273	ENSAPOG00000021882	polr1d	94	70.000	Acanthochromis_polyacanthus
ENSLAFG00000032290	POLR1D	94	88.800	ENSAMEG00000019095	POLR1D	100	88.800	Ailuropoda_melanoleuca
ENSLAFG00000032290	POLR1D	80	70.370	ENSACIG00000013328	polr1d	94	70.370	Amphilophus_citrinellus
ENSLAFG00000032290	POLR1D	80	69.159	ENSAOCG00000018500	polr1d	94	69.159	Amphiprion_ocellaris
ENSLAFG00000032290	POLR1D	79	69.524	ENSAPEG00000009489	polr1d	92	69.524	Amphiprion_percula
ENSLAFG00000032290	POLR1D	80	67.290	ENSATEG00000019322	polr1d	94	67.290	Anabas_testudineus
ENSLAFG00000032290	POLR1D	80	68.868	ENSACAG00000015753	POLR1D	91	68.868	Anolis_carolinensis
ENSLAFG00000032290	POLR1D	100	88.722	ENSANAG00000024486	POLR1D	100	88.722	Aotus_nancymaae
ENSLAFG00000032290	POLR1D	77	74.510	ENSACLG00000023805	polr1d	95	70.370	Astatotilapia_calliptera
ENSLAFG00000032290	POLR1D	80	69.811	ENSAMXG00000036118	polr1d	92	69.811	Astyanax_mexicanus
ENSLAFG00000032290	POLR1D	100	87.218	ENSBTAG00000008642	POLR1D	100	87.218	Bos_taurus
ENSLAFG00000032290	POLR1D	100	87.218	ENSBTAG00000033252	-	100	87.218	Bos_taurus
ENSLAFG00000032290	POLR1D	62	39.024	WBGene00010230	rpac-19	57	39.024	Caenorhabditis_elegans
ENSLAFG00000032290	POLR1D	100	87.970	ENSCJAG00000044669	POLR1D	100	87.970	Callithrix_jacchus
ENSLAFG00000032290	POLR1D	100	88.722	ENSCAFG00000006755	POLR1D	100	88.722	Canis_familiaris
ENSLAFG00000032290	POLR1D	100	87.970	ENSCHIG00000021910	POLR1D	100	87.970	Capra_hircus
ENSLAFG00000032290	POLR1D	93	87.903	ENSTSYG00000026817	-	93	87.903	Carlito_syrichta
ENSLAFG00000032290	POLR1D	99	77.612	ENSTSYG00000034852	-	98	80.672	Carlito_syrichta
ENSLAFG00000032290	POLR1D	93	53.226	ENSCAPG00000006058	-	95	53.226	Cavia_aperea
ENSLAFG00000032290	POLR1D	94	53.600	ENSCPOG00000030450	-	96	53.600	Cavia_porcellus
ENSLAFG00000032290	POLR1D	100	87.970	ENSCCAG00000021349	-	100	87.970	Cebus_capucinus
ENSLAFG00000032290	POLR1D	100	70.677	ENSCCAG00000020191	-	100	70.677	Cebus_capucinus
ENSLAFG00000032290	POLR1D	100	90.226	ENSCATG00000030710	-	100	90.226	Cercocebus_atys
ENSLAFG00000032290	POLR1D	100	78.947	ENSCATG00000022900	-	100	78.947	Cercocebus_atys
ENSLAFG00000032290	POLR1D	93	87.903	ENSCLAG00000017623	POLR1D	100	87.903	Chinchilla_lanigera
ENSLAFG00000032290	POLR1D	73	78.351	ENSCPBG00000004719	POLR1D	96	78.351	Chrysemys_picta_bellii
ENSLAFG00000032290	POLR1D	100	84.962	ENSCANG00000037694	-	100	84.962	Colobus_angolensis_palliatus
ENSLAFG00000032290	POLR1D	100	89.474	ENSCANG00000028632	-	100	89.474	Colobus_angolensis_palliatus
ENSLAFG00000032290	POLR1D	100	87.970	ENSCGRG00001021251	Polr1d	100	87.970	Cricetulus_griseus_chok1gshd
ENSLAFG00000032290	POLR1D	100	87.970	ENSCGRG00000011639	Polr1d	100	87.970	Cricetulus_griseus_crigri
ENSLAFG00000032290	POLR1D	78	70.192	ENSCSEG00000018268	polr1d	91	69.159	Cynoglossus_semilaevis
ENSLAFG00000032290	POLR1D	79	71.429	ENSCVAG00000018527	polr1d	92	71.429	Cyprinodon_variegatus
ENSLAFG00000032290	POLR1D	81	65.741	ENSDARG00000037570	polr1d	96	65.741	Danio_rerio
ENSLAFG00000032290	POLR1D	100	87.970	ENSDNOG00000043676	-	100	87.970	Dasypus_novemcinctus
ENSLAFG00000032290	POLR1D	100	85.821	ENSDNOG00000046247	-	100	85.821	Dasypus_novemcinctus
ENSLAFG00000032290	POLR1D	100	87.970	ENSDORG00000029155	Polr1d	100	87.970	Dipodomys_ordii
ENSLAFG00000032290	POLR1D	65	44.186	FBgn0086447	l(2)37Cg	81	44.186	Drosophila_melanogaster
ENSLAFG00000032290	POLR1D	93	87.097	ENSETEG00000012797	POLR1D	100	87.097	Echinops_telfairi
ENSLAFG00000032290	POLR1D	65	71.264	ENSEBUG00000011748	polr1d	61	71.264	Eptatretus_burgeri
ENSLAFG00000032290	POLR1D	95	92.063	ENSEASG00005022487	POLR1D	98	92.063	Equus_asinus_asinus
ENSLAFG00000032290	POLR1D	93	87.903	ENSEEUG00000013144	POLR1D	100	87.903	Erinaceus_europaeus
ENSLAFG00000032290	POLR1D	80	66.981	ENSELUG00000005105	rpac2	93	66.981	Esox_lucius
ENSLAFG00000032290	POLR1D	100	88.722	ENSFCAG00000030162	POLR1D	100	88.722	Felis_catus
ENSLAFG00000032290	POLR1D	72	75.000	ENSFALG00000011463	POLR1D	95	75.000	Ficedula_albicollis
ENSLAFG00000032290	POLR1D	100	87.218	ENSFDAG00000004463	POLR1D	100	87.218	Fukomys_damarensis
ENSLAFG00000032290	POLR1D	80	72.642	ENSFHEG00000015410	polr1d	92	72.642	Fundulus_heteroclitus
ENSLAFG00000032290	POLR1D	80	71.698	ENSGAFG00000001693	polr1d	93	71.698	Gambusia_affinis
ENSLAFG00000032290	POLR1D	82	66.972	ENSGACG00000018585	polr1d	92	66.972	Gasterosteus_aculeatus
ENSLAFG00000032290	POLR1D	80	78.302	ENSGAGG00000008503	POLR1D	93	78.302	Gopherus_agassizii
ENSLAFG00000032290	POLR1D	100	89.474	ENSGGOG00000004235	POLR1D	100	89.474	Gorilla_gorilla
ENSLAFG00000032290	POLR1D	81	70.370	ENSHBUG00000002111	polr1d	95	70.370	Haplochromis_burtoni
ENSLAFG00000032290	POLR1D	100	86.466	ENSHGLG00000003202	POLR1D	100	86.466	Heterocephalus_glaber_female
ENSLAFG00000032290	POLR1D	100	86.466	ENSHGLG00100009393	POLR1D	100	86.466	Heterocephalus_glaber_male
ENSLAFG00000032290	POLR1D	81	68.519	ENSHCOG00000003258	polr1d	95	68.519	Hippocampus_comes
ENSLAFG00000032290	POLR1D	78	74.038	ENSIPUG00000014810	polr1d	90	74.038	Ictalurus_punctatus
ENSLAFG00000032290	POLR1D	100	89.474	ENSSTOG00000013877	POLR1D	100	89.474	Ictidomys_tridecemlineatus
ENSLAFG00000032290	POLR1D	95	71.429	ENSJJAG00000021667	-	75	71.429	Jaculus_jaculus
ENSLAFG00000032290	POLR1D	97	83.459	ENSJJAG00000022671	-	99	88.235	Jaculus_jaculus
ENSLAFG00000032290	POLR1D	80	66.981	ENSKMAG00000015256	polr1d	93	66.981	Kryptolebias_marmoratus
ENSLAFG00000032290	POLR1D	80	71.698	ENSLBEG00000015919	polr1d	93	71.698	Labrus_bergylta
ENSLAFG00000032290	POLR1D	87	65.517	ENSLACG00000006810	POLR1D	96	65.517	Latimeria_chalumnae
ENSLAFG00000032290	POLR1D	54	75.000	ENSLOCG00000014976	polr1d	97	75.000	Lepisosteus_oculatus
ENSLAFG00000032290	POLR1D	94	89.600	ENSMFAG00000045264	POLR1D	97	89.600	Macaca_fascicularis
ENSLAFG00000032290	POLR1D	87	92.241	ENSMMUG00000020386	POLR1D	100	92.241	Macaca_mulatta
ENSLAFG00000032290	POLR1D	100	69.173	ENSMMUG00000041570	-	100	69.173	Macaca_mulatta
ENSLAFG00000032290	POLR1D	100	72.932	ENSMNEG00000038120	-	100	72.932	Macaca_nemestrina
ENSLAFG00000032290	POLR1D	100	90.226	ENSMNEG00000008630	-	100	90.226	Macaca_nemestrina
ENSLAFG00000032290	POLR1D	100	90.226	ENSMLEG00000041048	-	100	90.226	Mandrillus_leucophaeus
ENSLAFG00000032290	POLR1D	100	78.947	ENSMLEG00000032251	-	100	78.947	Mandrillus_leucophaeus
ENSLAFG00000032290	POLR1D	76	71.287	ENSMAMG00000014834	polr1d	94	71.287	Mastacembelus_armatus
ENSLAFG00000032290	POLR1D	77	74.510	ENSMZEG00005006638	polr1d	90	74.510	Maylandia_zebra
ENSLAFG00000032290	POLR1D	69	77.174	ENSMGAG00000005322	POLR1D	84	77.174	Meleagris_gallopavo
ENSLAFG00000032290	POLR1D	100	87.970	ENSMAUG00000001946	Polr1d	100	87.970	Mesocricetus_auratus
ENSLAFG00000032290	POLR1D	99	72.727	ENSMICG00000007349	-	100	72.727	Microcebus_murinus
ENSLAFG00000032290	POLR1D	100	87.970	ENSMICG00000016883	-	100	87.970	Microcebus_murinus
ENSLAFG00000032290	POLR1D	98	88.462	ENSMOCG00000021288	Polr1d	98	88.462	Microtus_ochrogaster
ENSLAFG00000032290	POLR1D	84	67.257	ENSMMOG00000009605	polr1d	99	67.257	Mola_mola
ENSLAFG00000032290	POLR1D	81	84.259	ENSMODG00000023881	POLR1D	95	84.259	Monodelphis_domestica
ENSLAFG00000032290	POLR1D	84	65.487	ENSMALG00000010652	polr1d	99	65.487	Monopterus_albus
ENSLAFG00000032290	POLR1D	100	84.962	MGP_CAROLIEiJ_G0028034	Polr1d	100	84.962	Mus_caroli
ENSLAFG00000032290	POLR1D	100	84.962	ENSMUSG00000029642	Polr1d	100	84.962	Mus_musculus
ENSLAFG00000032290	POLR1D	100	84.211	MGP_PahariEiJ_G0024600	Polr1d	100	84.211	Mus_pahari
ENSLAFG00000032290	POLR1D	100	85.714	MGP_SPRETEiJ_G0029032	Polr1d	100	85.714	Mus_spretus
ENSLAFG00000032290	POLR1D	99	80.303	ENSMLUG00000004118	-	99	80.303	Myotis_lucifugus
ENSLAFG00000032290	POLR1D	100	87.218	ENSMLUG00000027169	-	100	87.218	Myotis_lucifugus
ENSLAFG00000032290	POLR1D	87	89.655	ENSNGAG00000006014	Polr1d	100	89.655	Nannospalax_galili
ENSLAFG00000032290	POLR1D	81	70.370	ENSNBRG00000020327	polr1d	95	70.370	Neolamprologus_brichardi
ENSLAFG00000032290	POLR1D	100	89.474	ENSNLEG00000000358	POLR1D	100	89.474	Nomascus_leucogenys
ENSLAFG00000032290	POLR1D	100	72.180	ENSODEG00000014801	-	100	72.180	Octodon_degus
ENSLAFG00000032290	POLR1D	100	86.466	ENSODEG00000005294	-	100	86.466	Octodon_degus
ENSLAFG00000032290	POLR1D	79	81.905	ENSOANG00000008708	-	97	81.905	Ornithorhynchus_anatinus
ENSLAFG00000032290	POLR1D	100	89.474	ENSOCUG00000015706	POLR1D	82	89.474	Oryctolagus_cuniculus
ENSLAFG00000032290	POLR1D	81	67.593	ENSORLG00000010257	polr1d	95	67.593	Oryzias_latipes
ENSLAFG00000032290	POLR1D	83	67.273	ENSORLG00020000533	polr1d	74	67.273	Oryzias_latipes_hni
ENSLAFG00000032290	POLR1D	83	68.182	ENSORLG00015013267	polr1d	73	68.182	Oryzias_latipes_hsok
ENSLAFG00000032290	POLR1D	86	66.957	ENSOMEG00000014912	polr1d	77	66.957	Oryzias_melastigma
ENSLAFG00000032290	POLR1D	100	89.474	ENSOGAG00000014601	POLR1D	100	89.474	Otolemur_garnettii
ENSLAFG00000032290	POLR1D	94	88.000	ENSOARG00000017005	POLR1D	96	88.000	Ovis_aries
ENSLAFG00000032290	POLR1D	100	89.474	ENSPPAG00000028138	POLR1D	100	89.474	Pan_paniscus
ENSLAFG00000032290	POLR1D	98	90.000	ENSPPRG00000003381	POLR1D	98	90.000	Panthera_pardus
ENSLAFG00000032290	POLR1D	93	88.710	ENSPTIG00000018137	POLR1D	93	88.710	Panthera_tigris_altaica
ENSLAFG00000032290	POLR1D	100	89.474	ENSPTRG00000005734	POLR1D	100	89.474	Pan_troglodytes
ENSLAFG00000032290	POLR1D	100	77.444	ENSPANG00000035051	-	100	77.444	Papio_anubis
ENSLAFG00000032290	POLR1D	100	90.226	ENSPANG00000020259	-	100	90.226	Papio_anubis
ENSLAFG00000032290	POLR1D	86	62.609	ENSPKIG00000021891	polr1d	95	52.066	Paramormyrops_kingsleyae
ENSLAFG00000032290	POLR1D	80	77.358	ENSPSIG00000011822	POLR1D	82	77.358	Pelodiscus_sinensis
ENSLAFG00000032290	POLR1D	88	58.475	ENSPMGG00000012998	POLR1D	87	58.475	Periophthalmus_magnuspinnatus
ENSLAFG00000032290	POLR1D	80	68.868	ENSPMGG00000010359	polr1d	92	68.868	Periophthalmus_magnuspinnatus
ENSLAFG00000032290	POLR1D	100	83.459	ENSPEMG00000006336	-	100	83.459	Peromyscus_maniculatus_bairdii
ENSLAFG00000032290	POLR1D	81	58.333	ENSPMAG00000004228	polr1d	91	58.333	Petromyzon_marinus
ENSLAFG00000032290	POLR1D	81	84.259	ENSPCIG00000001673	POLR1D	95	84.259	Phascolarctos_cinereus
ENSLAFG00000032290	POLR1D	80	71.698	ENSPFOG00000023343	polr1d	92	73.750	Poecilia_formosa
ENSLAFG00000032290	POLR1D	80	71.698	ENSPLAG00000009675	polr1d	93	71.698	Poecilia_latipinna
ENSLAFG00000032290	POLR1D	80	71.698	ENSPMEG00000004628	polr1d	93	71.698	Poecilia_mexicana
ENSLAFG00000032290	POLR1D	80	71.698	ENSPREG00000022032	polr1d	93	71.698	Poecilia_reticulata
ENSLAFG00000032290	POLR1D	100	87.218	ENSPCOG00000028175	POLR1D	100	87.218	Propithecus_coquereli
ENSLAFG00000032290	POLR1D	81	70.370	ENSPNYG00000000107	polr1d	95	70.370	Pundamilia_nyererei
ENSLAFG00000032290	POLR1D	76	68.317	ENSPNAG00000001512	polr1d	87	67.308	Pygocentrus_nattereri
ENSLAFG00000032290	POLR1D	100	90.226	ENSRBIG00000036378	-	100	90.226	Rhinopithecus_bieti
ENSLAFG00000032290	POLR1D	100	84.962	ENSRBIG00000000336	-	100	84.962	Rhinopithecus_bieti
ENSLAFG00000032290	POLR1D	100	85.714	ENSRROG00000026751	-	100	85.714	Rhinopithecus_roxellana
ENSLAFG00000032290	POLR1D	100	90.226	ENSRROG00000042232	-	100	90.226	Rhinopithecus_roxellana
ENSLAFG00000032290	POLR1D	89	44.538	YNL113W	RPC19	84	44.538	Saccharomyces_cerevisiae
ENSLAFG00000032290	POLR1D	100	88.722	ENSSBOG00000028482	-	100	88.722	Saimiri_boliviensis_boliviensis
ENSLAFG00000032290	POLR1D	86	85.965	ENSSBOG00000030146	-	84	85.965	Saimiri_boliviensis_boliviensis
ENSLAFG00000032290	POLR1D	81	82.407	ENSSHAG00000001190	POLR1D	84	82.407	Sarcophilus_harrisii
ENSLAFG00000032290	POLR1D	83	72.072	ENSSFOG00015011375	polr1d	97	72.072	Scleropages_formosus
ENSLAFG00000032290	POLR1D	81	67.593	ENSSMAG00000011861	polr1d	95	67.593	Scophthalmus_maximus
ENSLAFG00000032290	POLR1D	80	67.290	ENSSDUG00000011930	polr1d	94	67.290	Seriola_dumerili
ENSLAFG00000032290	POLR1D	83	65.455	ENSSLDG00000023871	polr1d	93	65.455	Seriola_lalandi_dorsalis
ENSLAFG00000032290	POLR1D	100	87.218	ENSSARG00000007840	POLR1D	100	87.218	Sorex_araneus
ENSLAFG00000032290	POLR1D	75	79.000	ENSSPUG00000005786	POLR1D	91	75.472	Sphenodon_punctatus
ENSLAFG00000032290	POLR1D	80	71.698	ENSSPAG00000011764	polr1d	93	71.698	Stegastes_partitus
ENSLAFG00000032290	POLR1D	100	86.466	ENSSSCG00000009310	POLR1D	100	86.466	Sus_scrofa
ENSLAFG00000032290	POLR1D	72	75.000	ENSTGUG00000005450	POLR1D	100	75.000	Taeniopygia_guttata
ENSLAFG00000032290	POLR1D	78	66.346	ENSTRUG00000019741	polr1d	91	66.346	Takifugu_rubripes
ENSLAFG00000032290	POLR1D	93	88.710	ENSTBEG00000007006	POLR1D	100	88.710	Tupaia_belangeri
ENSLAFG00000032290	POLR1D	100	88.722	ENSUAMG00000011413	POLR1D	100	88.722	Ursus_americanus
ENSLAFG00000032290	POLR1D	93	88.710	ENSUMAG00000016968	POLR1D	97	88.710	Ursus_maritimus
ENSLAFG00000032290	POLR1D	100	88.722	ENSVVUG00000009216	POLR1D	100	88.722	Vulpes_vulpes
ENSLAFG00000032290	POLR1D	74	75.510	ENSXCOG00000011731	polr1d	75	75.510	Xiphophorus_couchianus
ENSLAFG00000032290	POLR1D	74	75.510	ENSXMAG00000017538	polr1d	75	75.510	Xiphophorus_maculatus