EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000032309 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 965 bases
Position: chrscaffold_4:79186471-79187435
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000020222	RrnaAD	PF00398.20	3.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000031065	-	918	-	ENSLAFP00000020222	305 (aa)	-	G3TXB4

Gene Model

Click here to download ENSLAFG00000032309's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000032309's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000032309	-	100	79.503	ENSLAFG00000014035	-	93	79.503

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000032309	-	100	72.981	ENSG00000029639	TFB1M	93	72.981	Homo_sapiens
ENSLAFG00000032309	-	100	56.522	ENSAPOG00000015493	tfb1m	90	56.522	Acanthochromis_polyacanthus
ENSLAFG00000032309	-	100	72.050	ENSAMEG00000012761	TFB1M	93	72.050	Ailuropoda_melanoleuca
ENSLAFG00000032309	-	100	56.522	ENSACIG00000014290	tfb1m	91	56.522	Amphilophus_citrinellus
ENSLAFG00000032309	-	100	56.522	ENSAOCG00000004027	tfb1m	90	56.522	Amphiprion_ocellaris
ENSLAFG00000032309	-	100	56.211	ENSAPEG00000020359	tfb1m	90	56.211	Amphiprion_percula
ENSLAFG00000032309	-	100	56.211	ENSATEG00000006826	tfb1m	91	56.211	Anabas_testudineus
ENSLAFG00000032309	-	100	63.354	ENSAPLG00000006328	TFB1M	93	63.354	Anas_platyrhynchos
ENSLAFG00000032309	-	100	63.975	ENSACAG00000005244	TFB1M	93	63.975	Anolis_carolinensis
ENSLAFG00000032309	-	100	73.913	ENSANAG00000021469	TFB1M	93	73.913	Aotus_nancymaae
ENSLAFG00000032309	-	100	57.764	ENSACLG00000018734	tfb1m	89	57.764	Astatotilapia_calliptera
ENSLAFG00000032309	-	100	58.696	ENSAMXG00000036128	tfb1m	88	58.696	Astyanax_mexicanus
ENSLAFG00000032309	-	100	73.292	ENSBTAG00000031895	TFB1M	98	77.477	Bos_taurus
ENSLAFG00000032309	-	98	37.578	WBGene00020189	tfbm-1	87	37.578	Caenorhabditis_elegans
ENSLAFG00000032309	-	100	72.981	ENSCJAG00000012540	TFB1M	94	72.981	Callithrix_jacchus
ENSLAFG00000032309	-	100	73.292	ENSCAFG00000000581	TFB1M	93	73.292	Canis_familiaris
ENSLAFG00000032309	-	100	73.292	ENSCAFG00020015224	TFB1M	93	73.292	Canis_lupus_dingo
ENSLAFG00000032309	-	100	73.292	ENSCHIG00000017013	TFB1M	96	73.292	Capra_hircus
ENSLAFG00000032309	-	100	73.602	ENSTSYG00000012298	TFB1M	93	73.602	Carlito_syrichta
ENSLAFG00000032309	-	69	55.204	ENSCAPG00000013843	TFB1M	74	55.204	Cavia_aperea
ENSLAFG00000032309	-	100	72.671	ENSCPOG00000030422	TFB1M	93	72.671	Cavia_porcellus
ENSLAFG00000032309	-	100	72.981	ENSCCAG00000015250	TFB1M	93	72.981	Cebus_capucinus
ENSLAFG00000032309	-	100	50.000	ENSCATG00000009009	TFB1M	92	49.689	Cercocebus_atys
ENSLAFG00000032309	-	100	73.292	ENSCLAG00000004500	TFB1M	94	73.292	Chinchilla_lanigera
ENSLAFG00000032309	-	100	72.050	ENSCSAG00000013259	TFB1M	93	72.050	Chlorocebus_sabaeus
ENSLAFG00000032309	-	100	70.898	ENSCHOG00000011245	TFB1M	93	70.898	Choloepus_hoffmanni
ENSLAFG00000032309	-	98	62.658	ENSCPBG00000016320	TFB1M	93	62.658	Chrysemys_picta_bellii
ENSLAFG00000032309	-	96	37.179	ENSCING00000003901	-	81	37.179	Ciona_intestinalis
ENSLAFG00000032309	-	95	38.762	ENSCSAVG00000004721	-	80	38.762	Ciona_savignyi
ENSLAFG00000032309	-	100	72.671	ENSCANG00000029768	TFB1M	96	72.671	Colobus_angolensis_palliatus
ENSLAFG00000032309	-	100	70.186	ENSCGRG00001022866	Tfb1m	94	70.186	Cricetulus_griseus_chok1gshd
ENSLAFG00000032309	-	95	70.915	ENSCGRG00000018084	Tfb1m	93	70.915	Cricetulus_griseus_crigri
ENSLAFG00000032309	-	99	58.750	ENSCSEG00000000131	tfb1m	90	58.750	Cynoglossus_semilaevis
ENSLAFG00000032309	-	100	56.832	ENSCVAG00000009201	tfb1m	91	56.832	Cyprinodon_variegatus
ENSLAFG00000032309	-	100	59.317	ENSDARG00000040727	tfb1m	99	61.567	Danio_rerio
ENSLAFG00000032309	-	100	68.807	ENSDNOG00000015984	-	90	68.807	Dasypus_novemcinctus
ENSLAFG00000032309	-	89	60.294	ENSDNOG00000032672	-	99	60.294	Dasypus_novemcinctus
ENSLAFG00000032309	-	100	70.807	ENSDORG00000012938	Tfb1m	93	70.807	Dipodomys_ordii
ENSLAFG00000032309	-	99	41.846	FBgn0261381	mtTFB1	96	41.846	Drosophila_melanogaster
ENSLAFG00000032309	-	100	53.251	ENSETEG00000005709	TFB1M	93	53.251	Echinops_telfairi
ENSLAFG00000032309	-	98	45.886	ENSEBUG00000010530	tfb1m	90	45.886	Eptatretus_burgeri
ENSLAFG00000032309	-	100	73.602	ENSEASG00005018887	TFB1M	93	73.602	Equus_asinus_asinus
ENSLAFG00000032309	-	100	74.845	ENSECAG00000020997	TFB1M	93	74.845	Equus_caballus
ENSLAFG00000032309	-	100	71.739	ENSEEUG00000014899	TFB1M	96	71.739	Erinaceus_europaeus
ENSLAFG00000032309	-	100	59.317	ENSELUG00000002752	tfb1m	82	59.317	Esox_lucius
ENSLAFG00000032309	-	100	72.671	ENSFCAG00000038785	TFB1M	93	72.671	Felis_catus
ENSLAFG00000032309	-	100	61.801	ENSFALG00000012500	TFB1M	93	61.801	Ficedula_albicollis
ENSLAFG00000032309	-	98	72.152	ENSFDAG00000016985	TFB1M	93	72.152	Fukomys_damarensis
ENSLAFG00000032309	-	100	55.590	ENSFHEG00000008407	tfb1m	91	55.590	Fundulus_heteroclitus
ENSLAFG00000032309	-	100	59.317	ENSGMOG00000018738	tfb1m	93	59.317	Gadus_morhua
ENSLAFG00000032309	-	100	62.733	ENSGALG00000013647	TFB1M	92	62.733	Gallus_gallus
ENSLAFG00000032309	-	100	57.143	ENSGAFG00000017997	tfb1m	91	57.143	Gambusia_affinis
ENSLAFG00000032309	-	100	56.211	ENSGACG00000006884	tfb1m	91	56.211	Gasterosteus_aculeatus
ENSLAFG00000032309	-	100	61.801	ENSGAGG00000025345	TFB1M	93	61.801	Gopherus_agassizii
ENSLAFG00000032309	-	100	72.981	ENSGGOG00000012189	TFB1M	93	72.981	Gorilla_gorilla
ENSLAFG00000032309	-	100	57.453	ENSHBUG00000019396	tfb1m	89	57.453	Haplochromis_burtoni
ENSLAFG00000032309	-	100	71.429	ENSHGLG00000002028	TFB1M	93	71.429	Heterocephalus_glaber_female
ENSLAFG00000032309	-	100	71.429	ENSHGLG00100001412	TFB1M	93	71.429	Heterocephalus_glaber_male
ENSLAFG00000032309	-	100	58.696	ENSHCOG00000014135	tfb1m	92	58.696	Hippocampus_comes
ENSLAFG00000032309	-	100	59.938	ENSIPUG00000010964	tfb1m	94	59.938	Ictalurus_punctatus
ENSLAFG00000032309	-	100	73.913	ENSSTOG00000026264	TFB1M	93	73.913	Ictidomys_tridecemlineatus
ENSLAFG00000032309	-	100	72.050	ENSJJAG00000022171	Tfb1m	91	72.050	Jaculus_jaculus
ENSLAFG00000032309	-	100	55.280	ENSKMAG00000012667	tfb1m	92	55.280	Kryptolebias_marmoratus
ENSLAFG00000032309	-	100	58.385	ENSLBEG00000011505	tfb1m	90	58.385	Labrus_bergylta
ENSLAFG00000032309	-	100	64.596	ENSLACG00000012594	TFB1M	91	64.596	Latimeria_chalumnae
ENSLAFG00000032309	-	100	54.601	ENSLOCG00000016850	tfb1m	93	54.601	Lepisosteus_oculatus
ENSLAFG00000032309	-	100	72.360	ENSMFAG00000031968	TFB1M	93	72.360	Macaca_fascicularis
ENSLAFG00000032309	-	100	72.050	ENSMMUG00000011171	TFB1M	93	72.050	Macaca_mulatta
ENSLAFG00000032309	-	100	72.360	ENSMNEG00000042278	TFB1M	93	72.360	Macaca_nemestrina
ENSLAFG00000032309	-	100	72.671	ENSMLEG00000000044	TFB1M	93	72.671	Mandrillus_leucophaeus
ENSLAFG00000032309	-	100	56.832	ENSMAMG00000009423	tfb1m	91	56.832	Mastacembelus_armatus
ENSLAFG00000032309	-	100	57.764	ENSMZEG00005005640	tfb1m	85	57.764	Maylandia_zebra
ENSLAFG00000032309	-	81	67.589	ENSMGAG00000012779	TFB1M	95	67.589	Meleagris_gallopavo
ENSLAFG00000032309	-	100	70.497	ENSMAUG00000006705	Tfb1m	93	70.497	Mesocricetus_auratus
ENSLAFG00000032309	-	100	72.981	ENSMICG00000045849	TFB1M	93	72.981	Microcebus_murinus
ENSLAFG00000032309	-	100	70.186	ENSMOCG00000013879	Tfb1m	93	70.186	Microtus_ochrogaster
ENSLAFG00000032309	-	100	59.006	ENSMMOG00000002203	tfb1m	90	59.006	Mola_mola
ENSLAFG00000032309	-	100	67.702	ENSMODG00000008169	TFB1M	94	67.702	Monodelphis_domestica
ENSLAFG00000032309	-	100	58.075	ENSMALG00000011657	tfb1m	85	58.075	Monopterus_albus
ENSLAFG00000032309	-	100	71.739	MGP_CAROLIEiJ_G0021018	Tfb1m	93	71.739	Mus_caroli
ENSLAFG00000032309	-	100	72.050	ENSMUSG00000036983	Tfb1m	93	72.050	Mus_musculus
ENSLAFG00000032309	-	100	71.118	MGP_PahariEiJ_G0023336	Tfb1m	93	71.118	Mus_pahari
ENSLAFG00000032309	-	100	71.739	MGP_SPRETEiJ_G0021923	Tfb1m	93	71.739	Mus_spretus
ENSLAFG00000032309	-	100	72.671	ENSMPUG00000002073	TFB1M	93	72.671	Mustela_putorius_furo
ENSLAFG00000032309	-	100	72.671	ENSMLUG00000011329	TFB1M	93	72.671	Myotis_lucifugus
ENSLAFG00000032309	-	100	70.807	ENSNGAG00000015154	Tfb1m	90	70.807	Nannospalax_galili
ENSLAFG00000032309	-	100	57.764	ENSNBRG00000009004	tfb1m	90	57.764	Neolamprologus_brichardi
ENSLAFG00000032309	-	100	73.292	ENSNLEG00000034352	TFB1M	93	73.292	Nomascus_leucogenys
ENSLAFG00000032309	-	100	52.484	ENSMEUG00000001699	-	92	52.484	Notamacropus_eugenii
ENSLAFG00000032309	-	100	56.522	ENSOPRG00000008921	TFB1M	94	56.522	Ochotona_princeps
ENSLAFG00000032309	-	98	70.794	ENSODEG00000005915	TFB1M	92	70.794	Octodon_degus
ENSLAFG00000032309	-	100	58.075	ENSONIG00000008109	tfb1m	93	58.075	Oreochromis_niloticus
ENSLAFG00000032309	-	100	71.739	ENSOCUG00000012154	TFB1M	94	71.739	Oryctolagus_cuniculus
ENSLAFG00000032309	-	100	59.006	ENSORLG00000017328	tfb1m	78	59.006	Oryzias_latipes
ENSLAFG00000032309	-	100	59.317	ENSORLG00020002250	tfb1m	94	59.317	Oryzias_latipes_hni
ENSLAFG00000032309	-	100	58.696	ENSORLG00015016067	tfb1m	94	58.696	Oryzias_latipes_hsok
ENSLAFG00000032309	-	100	58.075	ENSOMEG00000015641	tfb1m	91	58.075	Oryzias_melastigma
ENSLAFG00000032309	-	100	72.136	ENSOGAG00000011681	TFB1M	94	72.136	Otolemur_garnettii
ENSLAFG00000032309	-	100	71.951	ENSOARG00000004216	TFB1M	96	71.951	Ovis_aries
ENSLAFG00000032309	-	100	72.981	ENSPPAG00000030834	TFB1M	93	72.981	Pan_paniscus
ENSLAFG00000032309	-	100	72.671	ENSPPRG00000013578	TFB1M	94	72.671	Panthera_pardus
ENSLAFG00000032309	-	100	72.671	ENSPTIG00000003540	TFB1M	93	72.671	Panthera_tigris_altaica
ENSLAFG00000032309	-	100	72.981	ENSPTRG00000018730	TFB1M	93	72.981	Pan_troglodytes
ENSLAFG00000032309	-	100	72.360	ENSPANG00000007489	TFB1M	93	72.360	Papio_anubis
ENSLAFG00000032309	-	100	57.453	ENSPKIG00000021117	tfb1m	92	57.453	Paramormyrops_kingsleyae
ENSLAFG00000032309	-	100	62.422	ENSPSIG00000006643	TFB1M	94	62.422	Pelodiscus_sinensis
ENSLAFG00000032309	-	100	58.075	ENSPMGG00000011289	tfb1m	93	58.075	Periophthalmus_magnuspinnatus
ENSLAFG00000032309	-	100	70.497	ENSPEMG00000010410	Tfb1m	93	70.497	Peromyscus_maniculatus_bairdii
ENSLAFG00000032309	-	57	47.396	ENSPMAG00000008056	tfb1m	86	47.396	Petromyzon_marinus
ENSLAFG00000032309	-	100	68.944	ENSPCIG00000001010	TFB1M	90	68.944	Phascolarctos_cinereus
ENSLAFG00000032309	-	100	55.864	ENSPFOG00000005139	tfb1m	92	55.864	Poecilia_formosa
ENSLAFG00000032309	-	100	56.211	ENSPLAG00000021410	tfb1m	91	56.211	Poecilia_latipinna
ENSLAFG00000032309	-	100	55.901	ENSPMEG00000020166	tfb1m	91	55.901	Poecilia_mexicana
ENSLAFG00000032309	-	100	55.901	ENSPREG00000022392	tfb1m	91	55.901	Poecilia_reticulata
ENSLAFG00000032309	-	100	70.588	ENSPPYG00000017123	TFB1M	94	70.588	Pongo_abelii
ENSLAFG00000032309	-	85	65.343	ENSPCAG00000007078	TFB1M	92	65.343	Procavia_capensis
ENSLAFG00000032309	-	100	73.292	ENSPCOG00000028453	TFB1M	93	73.292	Propithecus_coquereli
ENSLAFG00000032309	-	100	75.466	ENSPVAG00000015818	TFB1M	94	75.466	Pteropus_vampyrus
ENSLAFG00000032309	-	100	58.075	ENSPNYG00000007330	tfb1m	89	58.075	Pundamilia_nyererei
ENSLAFG00000032309	-	100	58.696	ENSPNAG00000007507	tfb1m	91	58.696	Pygocentrus_nattereri
ENSLAFG00000032309	-	100	70.807	ENSRNOG00000056223	Tfb1m	93	70.807	Rattus_norvegicus
ENSLAFG00000032309	-	100	72.360	ENSRBIG00000039975	TFB1M	96	72.360	Rhinopithecus_bieti
ENSLAFG00000032309	-	100	72.050	ENSRROG00000033802	TFB1M	96	72.050	Rhinopithecus_roxellana
ENSLAFG00000032309	-	100	73.292	ENSSBOG00000008663	TFB1M	93	73.292	Saimiri_boliviensis_boliviensis
ENSLAFG00000032309	-	86	66.906	ENSSHAG00000013259	TFB1M	81	66.906	Sarcophilus_harrisii
ENSLAFG00000032309	-	100	58.385	ENSSFOG00015009739	tfb1m	92	58.385	Scleropages_formosus
ENSLAFG00000032309	-	100	57.453	ENSSMAG00000008229	tfb1m	91	57.453	Scophthalmus_maximus
ENSLAFG00000032309	-	100	56.832	ENSSDUG00000011871	tfb1m	90	56.832	Seriola_dumerili
ENSLAFG00000032309	-	100	57.453	ENSSLDG00000023923	tfb1m	90	57.453	Seriola_lalandi_dorsalis
ENSLAFG00000032309	-	71	75.676	ENSSARG00000003159	TFB1M	100	75.676	Sorex_araneus
ENSLAFG00000032309	-	100	63.665	ENSSPUG00000015253	TFB1M	93	63.665	Sphenodon_punctatus
ENSLAFG00000032309	-	100	57.764	ENSSPAG00000019515	tfb1m	90	57.764	Stegastes_partitus
ENSLAFG00000032309	-	100	73.292	ENSSSCG00000024361	TFB1M	95	73.292	Sus_scrofa
ENSLAFG00000032309	-	100	62.422	ENSTGUG00000011136	TFB1M	93	62.422	Taeniopygia_guttata
ENSLAFG00000032309	-	100	56.522	ENSTRUG00000020334	tfb1m	90	56.522	Takifugu_rubripes
ENSLAFG00000032309	-	70	61.927	ENSTNIG00000016882	tfb1m	97	61.927	Tetraodon_nigroviridis
ENSLAFG00000032309	-	100	73.292	ENSTBEG00000008769	TFB1M	93	73.292	Tupaia_belangeri
ENSLAFG00000032309	-	100	75.466	ENSTTRG00000006327	TFB1M	96	75.466	Tursiops_truncatus
ENSLAFG00000032309	-	100	72.671	ENSUAMG00000017802	TFB1M	92	72.671	Ursus_americanus
ENSLAFG00000032309	-	100	72.981	ENSUMAG00000013377	TFB1M	84	72.981	Ursus_maritimus
ENSLAFG00000032309	-	100	73.913	ENSVPAG00000010148	TFB1M	95	73.913	Vicugna_pacos
ENSLAFG00000032309	-	100	73.602	ENSVVUG00000007643	TFB1M	94	73.602	Vulpes_vulpes
ENSLAFG00000032309	-	100	62.422	ENSXETG00000007852	tfb1m	93	62.422	Xenopus_tropicalis
ENSLAFG00000032309	-	100	56.832	ENSXCOG00000013230	tfb1m	91	56.832	Xiphophorus_couchianus
ENSLAFG00000032309	-	100	56.832	ENSXMAG00000019222	tfb1m	91	56.832	Xiphophorus_maculatus