EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000032342 (Gene tree)
Gene ID: -
Gene Symbol: RNPC3
Alias: FLJ20008|KIAA1839|RBM40|SNRNP65
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 36465 bases
Position: chrscaffold_11:47721516-47757980
Accession: 18666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000025668	RRM_1	PF00076.22	9.8e-18	1	2
ENSLAFP00000025668	RRM_1	PF00076.22	9.8e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000029091	RNPC3-201	1548	-	ENSLAFP00000025668	516 (aa)	-	G3UCW0

Gene Model

Click here to download ENSLAFG00000032342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000032342's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000032342	RNPC3	100	90.116	ENSG00000185946	RNPC3	100	92.029	Homo_sapiens
ENSLAFG00000032342	RNPC3	95	57.258	ENSAPOG00000017371	rnpc3	97	57.287	Acanthochromis_polyacanthus
ENSLAFG00000032342	RNPC3	98	90.927	ENSAMEG00000001694	RNPC3	99	89.788	Ailuropoda_melanoleuca
ENSLAFG00000032342	RNPC3	95	52.778	ENSACIG00000021043	rnpc3	97	52.778	Amphilophus_citrinellus
ENSLAFG00000032342	RNPC3	95	56.313	ENSAOCG00000014052	rnpc3	95	56.313	Amphiprion_ocellaris
ENSLAFG00000032342	RNPC3	95	56.112	ENSAPEG00000008739	rnpc3	95	56.112	Amphiprion_percula
ENSLAFG00000032342	RNPC3	95	55.159	ENSATEG00000021263	rnpc3	97	55.159	Anabas_testudineus
ENSLAFG00000032342	RNPC3	88	69.147	ENSAPLG00000015605	RNPC3	99	69.824	Anas_platyrhynchos
ENSLAFG00000032342	RNPC3	99	65.049	ENSACAG00000002029	RNPC3	96	67.400	Anolis_carolinensis
ENSLAFG00000032342	RNPC3	100	89.341	ENSANAG00000019950	RNPC3	99	89.341	Aotus_nancymaae
ENSLAFG00000032342	RNPC3	95	54.545	ENSACLG00000014702	rnpc3	96	54.472	Astatotilapia_calliptera
ENSLAFG00000032342	RNPC3	95	57.229	ENSAMXG00000033372	rnpc3	96	57.490	Astyanax_mexicanus
ENSLAFG00000032342	RNPC3	100	89.922	ENSBTAG00000019091	RNPC3	99	89.922	Bos_taurus
ENSLAFG00000032342	RNPC3	100	84.690	ENSCJAG00000035686	RNPC3	99	85.078	Callithrix_jacchus
ENSLAFG00000032342	RNPC3	100	91.296	ENSCAFG00000019972	RNPC3	99	89.942	Canis_familiaris
ENSLAFG00000032342	RNPC3	100	91.489	ENSCAFG00020011300	RNPC3	99	90.135	Canis_lupus_dingo
ENSLAFG00000032342	RNPC3	100	89.922	ENSCHIG00000020361	RNPC3	99	89.922	Capra_hircus
ENSLAFG00000032342	RNPC3	100	87.597	ENSTSYG00000030256	RNPC3	99	87.597	Carlito_syrichta
ENSLAFG00000032342	RNPC3	84	77.117	ENSCAPG00000013600	RNPC3	99	76.201	Cavia_aperea
ENSLAFG00000032342	RNPC3	100	87.984	ENSCPOG00000031638	RNPC3	99	87.984	Cavia_porcellus
ENSLAFG00000032342	RNPC3	100	89.341	ENSCCAG00000024301	RNPC3	99	89.341	Cebus_capucinus
ENSLAFG00000032342	RNPC3	98	68.379	ENSCATG00000035930	-	96	67.206	Cercocebus_atys
ENSLAFG00000032342	RNPC3	99	90.097	ENSCATG00000002086	RNPC3	99	90.097	Cercocebus_atys
ENSLAFG00000032342	RNPC3	100	84.690	ENSCLAG00000005169	RNPC3	99	87.403	Chinchilla_lanigera
ENSLAFG00000032342	RNPC3	99	89.903	ENSCSAG00000001519	RNPC3	99	89.903	Chlorocebus_sabaeus
ENSLAFG00000032342	RNPC3	98	68.472	ENSCPBG00000028311	RNPC3	95	70.221	Chrysemys_picta_bellii
ENSLAFG00000032342	RNPC3	95	37.278	ENSCING00000021276	-	98	37.751	Ciona_intestinalis
ENSLAFG00000032342	RNPC3	93	37.603	ENSCSAVG00000002800	-	74	61.475	Ciona_savignyi
ENSLAFG00000032342	RNPC3	99	89.515	ENSCANG00000031444	RNPC3	99	89.515	Colobus_angolensis_palliatus
ENSLAFG00000032342	RNPC3	100	87.209	ENSCGRG00001019276	Rnpc3	100	87.209	Cricetulus_griseus_chok1gshd
ENSLAFG00000032342	RNPC3	88	87.389	ENSCGRG00000000053	Rnpc3	100	87.389	Cricetulus_griseus_crigri
ENSLAFG00000032342	RNPC3	94	53.265	ENSCSEG00000013475	rnpc3	96	53.265	Cynoglossus_semilaevis
ENSLAFG00000032342	RNPC3	94	55.268	ENSCVAG00000002645	rnpc3	97	54.941	Cyprinodon_variegatus
ENSLAFG00000032342	RNPC3	95	56.048	ENSDARG00000011247	rnpc3	93	65.318	Danio_rerio
ENSLAFG00000032342	RNPC3	100	90.310	ENSDNOG00000044555	-	99	90.310	Dasypus_novemcinctus
ENSLAFG00000032342	RNPC3	100	89.922	ENSDNOG00000047498	-	99	89.922	Dasypus_novemcinctus
ENSLAFG00000032342	RNPC3	100	87.016	ENSDORG00000027343	Rnpc3	99	87.016	Dipodomys_ordii
ENSLAFG00000032342	RNPC3	95	47.758	ENSEBUG00000002068	rnpc3	97	47.059	Eptatretus_burgeri
ENSLAFG00000032342	RNPC3	100	90.522	ENSEASG00005015957	RNPC3	99	90.135	Equus_asinus_asinus
ENSLAFG00000032342	RNPC3	100	90.522	ENSECAG00000021148	RNPC3	99	89.168	Equus_caballus
ENSLAFG00000032342	RNPC3	95	52.621	ENSELUG00000002264	rnpc3	97	51.946	Esox_lucius
ENSLAFG00000032342	RNPC3	100	91.103	ENSFCAG00000024312	RNPC3	99	89.942	Felis_catus
ENSLAFG00000032342	RNPC3	88	71.586	ENSFALG00000002580	RNPC3	99	71.770	Ficedula_albicollis
ENSLAFG00000032342	RNPC3	100	88.566	ENSFDAG00000019948	RNPC3	100	88.566	Fukomys_damarensis
ENSLAFG00000032342	RNPC3	96	50.493	ENSFHEG00000020647	rnpc3	98	49.803	Fundulus_heteroclitus
ENSLAFG00000032342	RNPC3	95	53.924	ENSGMOG00000019213	rnpc3	95	53.144	Gadus_morhua
ENSLAFG00000032342	RNPC3	96	71.313	ENSGALG00000005162	RNPC3	89	70.707	Gallus_gallus
ENSLAFG00000032342	RNPC3	97	53.010	ENSGAFG00000017236	rnpc3	96	53.507	Gambusia_affinis
ENSLAFG00000032342	RNPC3	95	55.510	ENSGACG00000002048	rnpc3	96	55.578	Gasterosteus_aculeatus
ENSLAFG00000032342	RNPC3	96	69.819	ENSGAGG00000008438	RNPC3	95	70.020	Gopherus_agassizii
ENSLAFG00000032342	RNPC3	99	73.581	ENSGGOG00000026201	-	95	75.152	Gorilla_gorilla
ENSLAFG00000032342	RNPC3	78	78.947	ENSHBUG00000015966	rnpc3	82	78.947	Haplochromis_burtoni
ENSLAFG00000032342	RNPC3	100	89.535	ENSHGLG00000001708	RNPC3	99	89.535	Heterocephalus_glaber_female
ENSLAFG00000032342	RNPC3	100	89.535	ENSHGLG00100003005	RNPC3	99	89.535	Heterocephalus_glaber_male
ENSLAFG00000032342	RNPC3	95	54.980	ENSHCOG00000017135	rnpc3	97	54.257	Hippocampus_comes
ENSLAFG00000032342	RNPC3	95	56.313	ENSIPUG00000002916	rnpc3	97	56.313	Ictalurus_punctatus
ENSLAFG00000032342	RNPC3	100	87.791	ENSSTOG00000025020	RNPC3	99	87.791	Ictidomys_tridecemlineatus
ENSLAFG00000032342	RNPC3	100	85.465	ENSJJAG00000010203	Rnpc3	100	85.465	Jaculus_jaculus
ENSLAFG00000032342	RNPC3	95	55.466	ENSKMAG00000017358	rnpc3	97	53.678	Kryptolebias_marmoratus
ENSLAFG00000032342	RNPC3	95	56.513	ENSLBEG00000024901	rnpc3	95	56.513	Labrus_bergylta
ENSLAFG00000032342	RNPC3	97	60.277	ENSLACG00000005720	RNPC3	90	59.432	Latimeria_chalumnae
ENSLAFG00000032342	RNPC3	95	57.260	ENSLOCG00000007986	rnpc3	96	57.464	Lepisosteus_oculatus
ENSLAFG00000032342	RNPC3	98	65.810	ENSMFAG00000002917	-	95	66.194	Macaca_fascicularis
ENSLAFG00000032342	RNPC3	99	89.903	ENSMFAG00000002004	RNPC3	99	89.903	Macaca_fascicularis
ENSLAFG00000032342	RNPC3	99	89.903	ENSMMUG00000018039	RNPC3	99	89.903	Macaca_mulatta
ENSLAFG00000032342	RNPC3	82	80.374	ENSMMUG00000002098	-	88	80.374	Macaca_mulatta
ENSLAFG00000032342	RNPC3	98	61.811	ENSMNEG00000029209	-	96	64.444	Macaca_nemestrina
ENSLAFG00000032342	RNPC3	99	85.243	ENSMNEG00000033950	RNPC3	99	85.243	Macaca_nemestrina
ENSLAFG00000032342	RNPC3	98	67.515	ENSMLEG00000034644	-	96	66.799	Mandrillus_leucophaeus
ENSLAFG00000032342	RNPC3	99	90.097	ENSMLEG00000033628	RNPC3	99	90.097	Mandrillus_leucophaeus
ENSLAFG00000032342	RNPC3	95	53.493	ENSMAMG00000007496	rnpc3	97	50.973	Mastacembelus_armatus
ENSLAFG00000032342	RNPC3	98	52.783	ENSMZEG00005020233	rnpc3	97	53.678	Maylandia_zebra
ENSLAFG00000032342	RNPC3	88	69.890	ENSMGAG00000006381	RNPC3	99	70.330	Meleagris_gallopavo
ENSLAFG00000032342	RNPC3	97	88.176	ENSMAUG00000001358	Rnpc3	100	87.016	Mesocricetus_auratus
ENSLAFG00000032342	RNPC3	100	89.535	ENSMICG00000029591	RNPC3	99	89.535	Microcebus_murinus
ENSLAFG00000032342	RNPC3	97	87.400	ENSMOCG00000013423	Rnpc3	100	85.907	Microtus_ochrogaster
ENSLAFG00000032342	RNPC3	95	51.619	ENSMMOG00000005309	rnpc3	97	51.594	Mola_mola
ENSLAFG00000032342	RNPC3	100	77.907	ENSMODG00000002946	RNPC3	99	77.907	Monodelphis_domestica
ENSLAFG00000032342	RNPC3	95	54.016	ENSMALG00000015471	rnpc3	97	54.016	Monopterus_albus
ENSLAFG00000032342	RNPC3	100	86.628	MGP_CAROLIEiJ_G0025555	Rnpc3	100	86.628	Mus_caroli
ENSLAFG00000032342	RNPC3	100	86.822	ENSMUSG00000027981	Rnpc3	100	86.822	Mus_musculus
ENSLAFG00000032342	RNPC3	100	86.822	MGP_PahariEiJ_G0027001	Rnpc3	100	86.822	Mus_pahari
ENSLAFG00000032342	RNPC3	100	86.240	MGP_SPRETEiJ_G0026505	Rnpc3	100	86.240	Mus_spretus
ENSLAFG00000032342	RNPC3	100	90.329	ENSMPUG00000007349	RNPC3	99	88.975	Mustela_putorius_furo
ENSLAFG00000032342	RNPC3	100	86.628	ENSMLUG00000028743	RNPC3	99	86.628	Myotis_lucifugus
ENSLAFG00000032342	RNPC3	99	86.576	ENSNGAG00000010939	Rnpc3	100	86.628	Nannospalax_galili
ENSLAFG00000032342	RNPC3	95	54.545	ENSNBRG00000012196	rnpc3	93	54.472	Neolamprologus_brichardi
ENSLAFG00000032342	RNPC3	100	89.922	ENSNLEG00000012013	RNPC3	99	89.922	Nomascus_leucogenys
ENSLAFG00000032342	RNPC3	100	85.659	ENSODEG00000007612	RNPC3	99	85.659	Octodon_degus
ENSLAFG00000032342	RNPC3	95	54.970	ENSONIG00000004770	rnpc3	99	55.375	Oreochromis_niloticus
ENSLAFG00000032342	RNPC3	90	77.897	ENSOANG00000008220	RNPC3	99	78.326	Ornithorhynchus_anatinus
ENSLAFG00000032342	RNPC3	100	88.566	ENSOCUG00000004016	RNPC3	99	87.984	Oryctolagus_cuniculus
ENSLAFG00000032342	RNPC3	95	53.737	ENSORLG00000005694	rnpc3	97	55.040	Oryzias_latipes
ENSLAFG00000032342	RNPC3	95	54.545	ENSORLG00020005513	rnpc3	97	55.847	Oryzias_latipes_hni
ENSLAFG00000032342	RNPC3	95	53.939	ENSORLG00015002179	rnpc3	97	55.242	Oryzias_latipes_hsok
ENSLAFG00000032342	RNPC3	95	54.032	ENSOMEG00000017737	rnpc3	97	55.444	Oryzias_melastigma
ENSLAFG00000032342	RNPC3	100	89.922	ENSOGAG00000026182	RNPC3	99	89.922	Otolemur_garnettii
ENSLAFG00000032342	RNPC3	100	90.116	ENSOARG00000018719	RNPC3	99	90.116	Ovis_aries
ENSLAFG00000032342	RNPC3	100	73.450	ENSPPAG00000030278	-	95	75.975	Pan_paniscus
ENSLAFG00000032342	RNPC3	100	89.749	ENSPPAG00000037459	RNPC3	99	89.749	Pan_paniscus
ENSLAFG00000032342	RNPC3	100	91.489	ENSPPRG00000020246	RNPC3	99	90.329	Panthera_pardus
ENSLAFG00000032342	RNPC3	98	91.700	ENSPTIG00000009887	RNPC3	97	92.121	Panthera_tigris_altaica
ENSLAFG00000032342	RNPC3	100	73.062	ENSPTRG00000044227	-	95	75.154	Pan_troglodytes
ENSLAFG00000032342	RNPC3	100	89.922	ENSPTRG00000033902	RNPC3	99	89.922	Pan_troglodytes
ENSLAFG00000032342	RNPC3	98	70.866	ENSPANG00000029957	-	97	69.758	Papio_anubis
ENSLAFG00000032342	RNPC3	99	90.097	ENSPANG00000012137	RNPC3	99	90.097	Papio_anubis
ENSLAFG00000032342	RNPC3	96	52.988	ENSPKIG00000008828	rnpc3	95	52.323	Paramormyrops_kingsleyae
ENSLAFG00000032342	RNPC3	63	68.278	ENSPSIG00000007396	RNPC3	99	66.767	Pelodiscus_sinensis
ENSLAFG00000032342	RNPC3	93	52.033	ENSPMGG00000011742	rnpc3	95	52.439	Periophthalmus_magnuspinnatus
ENSLAFG00000032342	RNPC3	89	85.996	ENSPEMG00000020112	Rnpc3	100	86.726	Peromyscus_maniculatus_bairdii
ENSLAFG00000032342	RNPC3	96	45.192	ENSPMAG00000003778	rnpc3	97	45.349	Petromyzon_marinus
ENSLAFG00000032342	RNPC3	100	78.488	ENSPCIG00000004415	-	99	78.488	Phascolarctos_cinereus
ENSLAFG00000032342	RNPC3	95	53.320	ENSPFOG00000009895	rnpc3	97	53.320	Poecilia_formosa
ENSLAFG00000032342	RNPC3	95	53.320	ENSPLAG00000012023	rnpc3	97	53.320	Poecilia_latipinna
ENSLAFG00000032342	RNPC3	98	51.938	ENSPMEG00000003663	rnpc3	97	53.521	Poecilia_mexicana
ENSLAFG00000032342	RNPC3	96	52.673	ENSPREG00000010206	rnpc3	97	53.213	Poecilia_reticulata
ENSLAFG00000032342	RNPC3	84	86.636	ENSPPYG00000001102	RNPC3	99	86.636	Pongo_abelii
ENSLAFG00000032342	RNPC3	95	54.545	ENSPNYG00000020603	rnpc3	96	54.472	Pundamilia_nyererei
ENSLAFG00000032342	RNPC3	98	54.207	ENSPNAG00000000524	rnpc3	89	55.758	Pygocentrus_nattereri
ENSLAFG00000032342	RNPC3	100	86.434	ENSRNOG00000017310	Rnpc3	100	86.434	Rattus_norvegicus
ENSLAFG00000032342	RNPC3	99	84.884	ENSRBIG00000043897	RNPC3	99	84.884	Rhinopithecus_bieti
ENSLAFG00000032342	RNPC3	99	90.097	ENSRROG00000032334	RNPC3	99	90.097	Rhinopithecus_roxellana
ENSLAFG00000032342	RNPC3	100	88.760	ENSSBOG00000024473	RNPC3	98	89.568	Saimiri_boliviensis_boliviensis
ENSLAFG00000032342	RNPC3	100	78.101	ENSSHAG00000011859	RNPC3	99	78.101	Sarcophilus_harrisii
ENSLAFG00000032342	RNPC3	96	58.400	ENSSFOG00015013055	rnpc3	99	57.000	Scleropages_formosus
ENSLAFG00000032342	RNPC3	95	52.976	ENSSMAG00000020346	rnpc3	97	52.124	Scophthalmus_maximus
ENSLAFG00000032342	RNPC3	95	54.960	ENSSDUG00000006600	rnpc3	96	54.960	Seriola_dumerili
ENSLAFG00000032342	RNPC3	95	55.200	ENSSLDG00000007979	rnpc3	96	55.200	Seriola_lalandi_dorsalis
ENSLAFG00000032342	RNPC3	95	69.231	ENSSPUG00000008539	-	94	69.416	Sphenodon_punctatus
ENSLAFG00000032342	RNPC3	96	64.000	ENSSPUG00000003872	-	92	64.315	Sphenodon_punctatus
ENSLAFG00000032342	RNPC3	95	55.263	ENSSPAG00000005633	rnpc3	97	54.453	Stegastes_partitus
ENSLAFG00000032342	RNPC3	100	90.891	ENSSSCG00000037254	RNPC3	99	91.085	Sus_scrofa
ENSLAFG00000032342	RNPC3	88	70.640	ENSTGUG00000004795	-	99	69.757	Taeniopygia_guttata
ENSLAFG00000032342	RNPC3	95	55.200	ENSTNIG00000018963	rnpc3	97	55.200	Tetraodon_nigroviridis
ENSLAFG00000032342	RNPC3	98	91.897	ENSUMAG00000007775	RNPC3	97	92.121	Ursus_maritimus
ENSLAFG00000032342	RNPC3	100	91.489	ENSVVUG00000000331	RNPC3	99	90.135	Vulpes_vulpes
ENSLAFG00000032342	RNPC3	95	52.000	ENSXETG00000025027	rnpc3	97	52.000	Xenopus_tropicalis
ENSLAFG00000032342	RNPC3	96	52.335	ENSXCOG00000005013	rnpc3	97	50.000	Xiphophorus_couchianus
ENSLAFG00000032342	RNPC3	95	53.493	ENSXMAG00000006495	rnpc3	97	53.280	Xiphophorus_maculatus