EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000032716 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 5094 bases
Position: chrscaffold_65:12240342-12245435
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000018518	zf-C2H2	PF00096.26	5.6e-62	1	11
ENSLAFP00000018518	zf-C2H2	PF00096.26	5.6e-62	2	11
ENSLAFP00000018518	zf-C2H2	PF00096.26	5.6e-62	3	11
ENSLAFP00000018518	zf-C2H2	PF00096.26	5.6e-62	4	11
ENSLAFP00000018518	zf-C2H2	PF00096.26	5.6e-62	5	11
ENSLAFP00000018518	zf-C2H2	PF00096.26	5.6e-62	6	11
ENSLAFP00000018518	zf-C2H2	PF00096.26	5.6e-62	7	11
ENSLAFP00000018518	zf-C2H2	PF00096.26	5.6e-62	8	11
ENSLAFP00000018518	zf-C2H2	PF00096.26	5.6e-62	9	11
ENSLAFP00000018518	zf-C2H2	PF00096.26	5.6e-62	10	11
ENSLAFP00000018518	zf-C2H2	PF00096.26	5.6e-62	11	11
ENSLAFP00000029106	zf-C2H2	PF00096.26	1.5e-36	1	8
ENSLAFP00000029106	zf-C2H2	PF00096.26	1.5e-36	2	8
ENSLAFP00000029106	zf-C2H2	PF00096.26	1.5e-36	3	8
ENSLAFP00000029106	zf-C2H2	PF00096.26	1.5e-36	4	8
ENSLAFP00000029106	zf-C2H2	PF00096.26	1.5e-36	5	8
ENSLAFP00000029106	zf-C2H2	PF00096.26	1.5e-36	6	8
ENSLAFP00000029106	zf-C2H2	PF00096.26	1.5e-36	7	8
ENSLAFP00000029106	zf-C2H2	PF00096.26	1.5e-36	8	8
ENSLAFP00000018518	zf-met	PF12874.7	2.3e-07	1	2
ENSLAFP00000018518	zf-met	PF12874.7	2.3e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000026775	-	666	-	ENSLAFP00000029106	222 (aa)	-	G3UMP7
ENSLAFT00000035941	-	1563	-	ENSLAFP00000018518	521 (aa)	-	G3TSG0

Gene Model

Click here to download ENSLAFG00000032716's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000032716's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000032716	-	100	37.220	ENSLAFG00000011022	ZFP69B	69	38.071
ENSLAFG00000032716	-	99	34.146	ENSLAFG00000009299	SNAI2	56	35.714
ENSLAFG00000032716	-	85	32.258	ENSLAFG00000007048	ZIC3	51	31.933
ENSLAFG00000032716	-	100	37.681	ENSLAFG00000027848	ZNF408	53	37.714
ENSLAFG00000032716	-	100	34.222	ENSLAFG00000007752	-	98	34.222
ENSLAFG00000032716	-	100	42.453	ENSLAFG00000000308	ZNF574	88	31.283
ENSLAFG00000032716	-	100	43.396	ENSLAFG00000022529	ZNF628	100	38.542
ENSLAFG00000032716	-	100	40.807	ENSLAFG00000022290	ZNF668	92	40.807
ENSLAFG00000032716	-	100	33.607	ENSLAFG00000032306	-	52	35.632
ENSLAFG00000032716	-	100	36.598	ENSLAFG00000011186	ZNF235	78	36.598
ENSLAFG00000032716	-	100	35.751	ENSLAFG00000003125	ZFP1	67	35.354
ENSLAFG00000032716	-	100	33.721	ENSLAFG00000008381	ZNF384	52	36.047
ENSLAFG00000032716	-	100	36.323	ENSLAFG00000002806	ZNF317	74	36.323
ENSLAFG00000032716	-	99	35.065	ENSLAFG00000030265	SNAI1	62	34.513
ENSLAFG00000032716	-	100	36.441	ENSLAFG00000022367	GFI1B	52	36.364
ENSLAFG00000032716	-	100	38.117	ENSLAFG00000002909	-	92	38.034
ENSLAFG00000032716	-	100	31.481	ENSLAFG00000010084	ZNF652	54	32.468
ENSLAFG00000032716	-	100	40.359	ENSLAFG00000031653	-	98	40.359
ENSLAFG00000032716	-	99	36.036	ENSLAFG00000005117	SNAI3	63	37.662
ENSLAFG00000032716	-	100	32.127	ENSLAFG00000006532	PRDM5	95	30.742
ENSLAFG00000032716	-	100	51.852	ENSLAFG00000030700	ZNF865	100	42.169
ENSLAFG00000032716	-	100	33.735	ENSLAFG00000029320	ZNF784	83	33.333
ENSLAFG00000032716	-	100	33.186	ENSLAFG00000002266	ZNF319	84	31.418
ENSLAFG00000032716	-	100	32.121	ENSLAFG00000002317	PATZ1	55	32.121
ENSLAFG00000032716	-	100	36.283	ENSLAFG00000008686	-	100	36.667
ENSLAFG00000032716	-	100	37.387	ENSLAFG00000006959	ZNF2	61	37.339
ENSLAFG00000032716	-	100	37.349	ENSLAFG00000013445	ZNF521	97	37.349
ENSLAFG00000032716	-	100	35.821	ENSLAFG00000002458	GZF1	62	36.318
ENSLAFG00000032716	-	100	36.771	ENSLAFG00000014451	-	80	36.771

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000032716	-	100	96.429	ENSAMEG00000007292	ZNF646	89	96.429	Ailuropoda_melanoleuca
ENSLAFG00000032716	-	100	52.062	ENSACAG00000007108	-	99	53.125	Anolis_carolinensis
ENSLAFG00000032716	-	100	100.000	ENSBTAG00000051572	ZNF646	91	96.667	Bos_taurus
ENSLAFG00000032716	-	100	98.214	ENSCAFG00000016793	ZNF646	98	95.000	Canis_familiaris
ENSLAFG00000032716	-	100	98.214	ENSCAFG00020018148	ZNF646	98	95.000	Canis_lupus_dingo
ENSLAFG00000032716	-	100	98.214	ENSCHIG00000017805	ZNF646	91	95.000	Capra_hircus
ENSLAFG00000032716	-	100	96.667	ENSTSYG00000032488	ZNF646	98	96.667	Carlito_syrichta
ENSLAFG00000032716	-	100	78.571	ENSCAPG00000006001	ZNF646	99	78.571	Cavia_aperea
ENSLAFG00000032716	-	100	98.214	ENSCPOG00000034707	ZNF646	97	98.214	Cavia_porcellus
ENSLAFG00000032716	-	100	100.000	ENSCCAG00000032171	ZNF646	99	96.000	Cebus_capucinus
ENSLAFG00000032716	-	100	80.645	ENSCLAG00000011313	ZNF646	99	80.645	Chinchilla_lanigera
ENSLAFG00000032716	-	99	76.667	ENSCPBG00000009878	ZNF646	97	76.667	Chrysemys_picta_bellii
ENSLAFG00000032716	-	100	100.000	ENSDNOG00000031266	ZNF646	97	96.667	Dasypus_novemcinctus
ENSLAFG00000032716	-	100	76.786	ENSDORG00000002988	Zfp646	91	75.000	Dipodomys_ordii
ENSLAFG00000032716	-	100	89.091	ENSEEUG00000007108	-	55	86.441	Erinaceus_europaeus
ENSLAFG00000032716	-	100	74.194	ENSFDAG00000013867	ZNF646	97	48.913	Fukomys_damarensis
ENSLAFG00000032716	-	100	80.000	ENSGAGG00000018925	ZNF646	97	76.667	Gopherus_agassizii
ENSLAFG00000032716	-	100	73.077	ENSHGLG00000021435	ZNF646	96	49.284	Heterocephalus_glaber_female
ENSLAFG00000032716	-	100	100.000	ENSMICG00000001613	ZNF646	92	96.667	Microcebus_murinus
ENSLAFG00000032716	-	100	87.500	ENSMODG00000001808	ZNF646	99	83.333	Monodelphis_domestica
ENSLAFG00000032716	-	100	54.183	MGP_CAROLIEiJ_G0030525	Zfp646	97	52.857	Mus_caroli
ENSLAFG00000032716	-	100	68.613	ENSMUSG00000049739	Zfp646	98	68.613	Mus_musculus
ENSLAFG00000032716	-	100	56.154	MGP_PahariEiJ_G0013732	Zfp646	98	53.191	Mus_pahari
ENSLAFG00000032716	-	100	69.343	MGP_SPRETEiJ_G0031639	Zfp646	98	69.343	Mus_spretus
ENSLAFG00000032716	-	100	96.429	ENSMPUG00000011652	ZNF646	98	90.323	Mustela_putorius_furo
ENSLAFG00000032716	-	100	55.777	ENSMLUG00000004755	ZNF646	98	50.000	Myotis_lucifugus
ENSLAFG00000032716	-	100	58.000	ENSNGAG00000002579	Zfp646	98	53.226	Nannospalax_galili
ENSLAFG00000032716	-	100	87.500	ENSMEUG00000007504	ZNF646	99	82.258	Notamacropus_eugenii
ENSLAFG00000032716	-	100	85.714	ENSOPRG00000016125	ZNF646	92	80.645	Ochotona_princeps
ENSLAFG00000032716	-	100	81.356	ENSOANG00000010373	-	97	52.083	Ornithorhynchus_anatinus
ENSLAFG00000032716	-	100	98.214	ENSOCUG00000014377	ZNF646	97	95.000	Oryctolagus_cuniculus
ENSLAFG00000032716	-	100	98.214	ENSOARG00000008496	ZNF646	99	95.000	Ovis_aries
ENSLAFG00000032716	-	100	98.214	ENSPTIG00000011248	ZNF646	93	95.000	Panthera_tigris_altaica
ENSLAFG00000032716	-	99	60.976	ENSPSIG00000005522	ZNF646	100	60.976	Pelodiscus_sinensis
ENSLAFG00000032716	-	100	87.500	ENSPCIG00000016711	ZNF646	98	82.258	Phascolarctos_cinereus
ENSLAFG00000032716	-	100	63.248	ENSSHAG00000011486	-	99	57.143	Sarcophilus_harrisii
ENSLAFG00000032716	-	100	96.429	ENSSSCG00000026817	ZNF646	99	96.429	Sus_scrofa
ENSLAFG00000032716	-	100	100.000	ENSTTRG00000015538	ZNF646	92	96.667	Tursiops_truncatus
ENSLAFG00000032716	-	100	98.214	ENSUAMG00000008738	ZNF646	92	95.000	Ursus_americanus
ENSLAFG00000032716	-	100	98.214	ENSUMAG00000014051	ZNF646	90	95.000	Ursus_maritimus
ENSLAFG00000032716	-	100	98.214	ENSVVUG00000027718	ZNF646	98	68.539	Vulpes_vulpes
ENSLAFG00000032716	-	99	59.036	ENSXETG00000001910	znf646	100	59.036	Xenopus_tropicalis