EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000000214 (Gene tree)
Gene ID: 110000338
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: tRNA-splicing ligase RtcB homolog
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 5425 bases
Position: chrFKLU01000658.1:157834-163258
Accession: 110000338
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000000312	RtcB	PF01139.17	1.7e-141	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000000326	-	1506	XM_020655589	ENSLBEP00000000312	501 (aa)	XP_020511245	-

Gene Model

Click here to download ENSLBEG00000000214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000000214's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000000214	rtcb	100	98.812	ENSLBEG00000010566	RTCB	100	98.812

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000000214	rtcb	100	93.663	ENSG00000100220	RTCB	100	93.663	Homo_sapiens
ENSLBEG00000000214	rtcb	100	95.842	ENSAPOG00000006040	rtcb	100	95.842	Acanthochromis_polyacanthus
ENSLBEG00000000214	rtcb	100	93.663	ENSAMEG00000016152	RTCB	100	93.663	Ailuropoda_melanoleuca
ENSLBEG00000000214	rtcb	100	90.495	ENSACIG00000009083	rtcb	100	90.495	Amphilophus_citrinellus
ENSLBEG00000000214	rtcb	100	96.238	ENSAOCG00000005662	rtcb	100	97.391	Amphiprion_ocellaris
ENSLBEG00000000214	rtcb	96	91.581	ENSAPEG00000024653	rtcb	100	91.581	Amphiprion_percula
ENSLBEG00000000214	rtcb	100	96.238	ENSAPEG00000024701	rtcb	100	96.238	Amphiprion_percula
ENSLBEG00000000214	rtcb	100	96.238	ENSATEG00000000618	rtcb	100	96.238	Anabas_testudineus
ENSLBEG00000000214	rtcb	100	89.788	ENSACAG00000014817	RTCB	100	89.788	Anolis_carolinensis
ENSLBEG00000000214	rtcb	100	79.010	ENSANAG00000018191	-	91	79.010	Aotus_nancymaae
ENSLBEG00000000214	rtcb	73	97.222	ENSANAG00000023724	-	100	59.363	Aotus_nancymaae
ENSLBEG00000000214	rtcb	100	93.663	ENSACLG00000008367	rtcb	100	94.783	Astatotilapia_calliptera
ENSLBEG00000000214	rtcb	100	94.455	ENSAMXG00000042320	rtcb	100	94.455	Astyanax_mexicanus
ENSLBEG00000000214	rtcb	100	93.465	ENSBTAG00000011070	RTCB	100	93.465	Bos_taurus
ENSLBEG00000000214	rtcb	100	72.871	WBGene00008877	rtcb-1	100	72.871	Caenorhabditis_elegans
ENSLBEG00000000214	rtcb	100	93.465	ENSCJAG00000006128	RTCB	100	93.465	Callithrix_jacchus
ENSLBEG00000000214	rtcb	100	89.703	ENSCAFG00000010789	-	100	89.703	Canis_familiaris
ENSLBEG00000000214	rtcb	100	93.663	ENSCAFG00000001785	RTCB	100	93.663	Canis_familiaris
ENSLBEG00000000214	rtcb	100	93.663	ENSCAFG00020004890	-	100	93.663	Canis_lupus_dingo
ENSLBEG00000000214	rtcb	87	89.773	ENSCAFG00020018953	-	99	89.773	Canis_lupus_dingo
ENSLBEG00000000214	rtcb	100	93.663	ENSCHIG00000027009	-	100	93.663	Capra_hircus
ENSLBEG00000000214	rtcb	100	93.267	ENSTSYG00000012320	RTCB	100	93.267	Carlito_syrichta
ENSLBEG00000000214	rtcb	94	93.082	ENSCAPG00000011647	RTCB	96	93.082	Cavia_aperea
ENSLBEG00000000214	rtcb	100	93.465	ENSCCAG00000000618	RTCB	100	93.465	Cebus_capucinus
ENSLBEG00000000214	rtcb	100	93.267	ENSCATG00000033424	RTCB	100	93.267	Cercocebus_atys
ENSLBEG00000000214	rtcb	100	93.267	ENSCLAG00000007997	RTCB	100	93.267	Chinchilla_lanigera
ENSLBEG00000000214	rtcb	100	93.069	ENSCSAG00000008351	RTCB	100	93.069	Chlorocebus_sabaeus
ENSLBEG00000000214	rtcb	100	80.198	ENSCHOG00000009123	RTCB	100	80.198	Choloepus_hoffmanni
ENSLBEG00000000214	rtcb	100	92.673	ENSCPBG00000023184	RTCB	100	92.673	Chrysemys_picta_bellii
ENSLBEG00000000214	rtcb	100	81.386	ENSCING00000003830	-	100	81.386	Ciona_intestinalis
ENSLBEG00000000214	rtcb	100	81.782	ENSCSAVG00000008124	-	100	81.093	Ciona_savignyi
ENSLBEG00000000214	rtcb	100	89.505	ENSCANG00000001891	RTCB	100	89.505	Colobus_angolensis_palliatus
ENSLBEG00000000214	rtcb	100	93.267	ENSCGRG00001011173	Rtcb	100	93.267	Cricetulus_griseus_chok1gshd
ENSLBEG00000000214	rtcb	93	93.843	ENSCGRG00000009587	-	96	93.843	Cricetulus_griseus_crigri
ENSLBEG00000000214	rtcb	100	95.644	ENSCSEG00000003986	rtcb	100	95.644	Cynoglossus_semilaevis
ENSLBEG00000000214	rtcb	82	93.990	ENSCVAG00000000569	rtcb	95	93.990	Cyprinodon_variegatus
ENSLBEG00000000214	rtcb	100	95.644	ENSDARG00000101047	rtcb	100	95.644	Danio_rerio
ENSLBEG00000000214	rtcb	80	89.681	ENSDNOG00000012425	RTCB	99	89.681	Dasypus_novemcinctus
ENSLBEG00000000214	rtcb	100	93.267	ENSDORG00000010855	Rtcb	100	93.267	Dipodomys_ordii
ENSLBEG00000000214	rtcb	99	84.493	FBgn0032781	RtcB	99	84.493	Drosophila_melanogaster
ENSLBEG00000000214	rtcb	100	87.525	ENSETEG00000001988	RTCB	100	87.525	Echinops_telfairi
ENSLBEG00000000214	rtcb	100	84.950	ENSEBUG00000014235	rtcb	100	84.950	Eptatretus_burgeri
ENSLBEG00000000214	rtcb	100	93.465	ENSEASG00005019059	RTCB	100	93.465	Equus_asinus_asinus
ENSLBEG00000000214	rtcb	100	93.465	ENSECAG00000023998	RTCB	100	93.465	Equus_caballus
ENSLBEG00000000214	rtcb	88	84.564	ENSEEUG00000006251	RTCB	100	84.564	Erinaceus_europaeus
ENSLBEG00000000214	rtcb	100	83.743	ENSELUG00000009275	rtcb	100	83.743	Esox_lucius
ENSLBEG00000000214	rtcb	100	93.663	ENSFCAG00000026480	RTCB	100	93.663	Felis_catus
ENSLBEG00000000214	rtcb	100	93.663	ENSFALG00000013334	RTCB	100	93.663	Ficedula_albicollis
ENSLBEG00000000214	rtcb	100	93.465	ENSFDAG00000018150	RTCB	100	93.465	Fukomys_damarensis
ENSLBEG00000000214	rtcb	100	96.040	ENSFHEG00000009595	rtcb	100	96.040	Fundulus_heteroclitus
ENSLBEG00000000214	rtcb	100	93.465	ENSGMOG00000018882	rtcb	100	93.465	Gadus_morhua
ENSLBEG00000000214	rtcb	100	93.267	ENSGALG00000012611	RTCB	100	93.267	Gallus_gallus
ENSLBEG00000000214	rtcb	100	95.248	ENSGAFG00000004198	rtcb	100	95.248	Gambusia_affinis
ENSLBEG00000000214	rtcb	100	95.644	ENSGACG00000000586	rtcb	100	95.644	Gasterosteus_aculeatus
ENSLBEG00000000214	rtcb	93	92.340	ENSGAGG00000019133	RTCB	98	92.340	Gopherus_agassizii
ENSLBEG00000000214	rtcb	100	93.663	ENSGGOG00000011402	RTCB	100	93.663	Gorilla_gorilla
ENSLBEG00000000214	rtcb	100	93.663	ENSHBUG00000020571	rtcb	100	93.663	Haplochromis_burtoni
ENSLBEG00000000214	rtcb	100	93.465	ENSHGLG00000004492	RTCB	100	93.465	Heterocephalus_glaber_female
ENSLBEG00000000214	rtcb	93	67.742	ENSHGLG00000001066	-	99	67.742	Heterocephalus_glaber_female
ENSLBEG00000000214	rtcb	100	93.465	ENSHGLG00100008965	RTCB	100	93.465	Heterocephalus_glaber_male
ENSLBEG00000000214	rtcb	100	92.899	ENSHCOG00000006450	rtcb	100	92.899	Hippocampus_comes
ENSLBEG00000000214	rtcb	100	94.059	ENSIPUG00000015443	rtcb	100	94.059	Ictalurus_punctatus
ENSLBEG00000000214	rtcb	100	93.663	ENSSTOG00000003878	RTCB	100	93.663	Ictidomys_tridecemlineatus
ENSLBEG00000000214	rtcb	100	93.267	ENSJJAG00000010667	Rtcb	100	93.267	Jaculus_jaculus
ENSLBEG00000000214	rtcb	100	95.842	ENSKMAG00000013178	rtcb	100	95.842	Kryptolebias_marmoratus
ENSLBEG00000000214	rtcb	100	93.663	ENSLACG00000013033	RTCB	100	93.663	Latimeria_chalumnae
ENSLBEG00000000214	rtcb	100	95.050	ENSLOCG00000016515	rtcb	99	95.050	Lepisosteus_oculatus
ENSLBEG00000000214	rtcb	100	93.069	ENSLAFG00000002082	RTCB	100	93.069	Loxodonta_africana
ENSLBEG00000000214	rtcb	100	93.069	ENSMFAG00000034419	RTCB	100	93.069	Macaca_fascicularis
ENSLBEG00000000214	rtcb	100	93.069	ENSMMUG00000006720	RTCB	100	93.069	Macaca_mulatta
ENSLBEG00000000214	rtcb	100	93.069	ENSMNEG00000040669	RTCB	100	93.069	Macaca_nemestrina
ENSLBEG00000000214	rtcb	100	93.267	ENSMLEG00000040505	RTCB	100	93.267	Mandrillus_leucophaeus
ENSLBEG00000000214	rtcb	100	95.248	ENSMAMG00000020676	rtcb	100	95.248	Mastacembelus_armatus
ENSLBEG00000000214	rtcb	100	93.663	ENSMZEG00005018942	rtcb	100	93.663	Maylandia_zebra
ENSLBEG00000000214	rtcb	100	92.899	ENSMGAG00000012805	RTCB	100	92.899	Meleagris_gallopavo
ENSLBEG00000000214	rtcb	60	99.115	ENSMAUG00000008301	Rtcb	100	99.115	Mesocricetus_auratus
ENSLBEG00000000214	rtcb	100	93.465	ENSMICG00000013303	-	100	93.465	Microcebus_murinus
ENSLBEG00000000214	rtcb	100	74.653	ENSMICG00000036677	-	100	74.653	Microcebus_murinus
ENSLBEG00000000214	rtcb	100	93.663	ENSMOCG00000002440	Rtcb	100	93.663	Microtus_ochrogaster
ENSLBEG00000000214	rtcb	100	95.644	ENSMMOG00000005987	rtcb	100	95.644	Mola_mola
ENSLBEG00000000214	rtcb	100	93.465	ENSMODG00000001414	RTCB	100	93.465	Monodelphis_domestica
ENSLBEG00000000214	rtcb	100	96.436	ENSMALG00000007603	rtcb	100	96.436	Monopterus_albus
ENSLBEG00000000214	rtcb	100	93.267	MGP_CAROLIEiJ_G0015689	Rtcb	100	93.267	Mus_caroli
ENSLBEG00000000214	rtcb	100	93.267	ENSMUSG00000001783	Rtcb	100	93.267	Mus_musculus
ENSLBEG00000000214	rtcb	100	93.267	MGP_PahariEiJ_G0031396	Rtcb	100	93.267	Mus_pahari
ENSLBEG00000000214	rtcb	100	93.267	MGP_SPRETEiJ_G0016507	Rtcb	100	93.267	Mus_spretus
ENSLBEG00000000214	rtcb	100	93.663	ENSMPUG00000012285	RTCB	100	93.663	Mustela_putorius_furo
ENSLBEG00000000214	rtcb	100	91.124	ENSMLUG00000007803	RTCB	100	91.124	Myotis_lucifugus
ENSLBEG00000000214	rtcb	73	98.667	ENSNGAG00000005093	Rtcb	100	98.667	Nannospalax_galili
ENSLBEG00000000214	rtcb	100	93.861	ENSNBRG00000017202	rtcb	100	93.861	Neolamprologus_brichardi
ENSLBEG00000000214	rtcb	100	93.663	ENSNLEG00000004960	RTCB	100	93.663	Nomascus_leucogenys
ENSLBEG00000000214	rtcb	88	99.107	ENSMEUG00000007809	-	87	99.107	Notamacropus_eugenii
ENSLBEG00000000214	rtcb	73	97.500	ENSOPRG00000003488	RTCB	78	97.500	Ochotona_princeps
ENSLBEG00000000214	rtcb	75	99.057	ENSODEG00000013033	-	100	99.057	Octodon_degus
ENSLBEG00000000214	rtcb	100	63.273	ENSODEG00000005042	-	100	63.273	Octodon_degus
ENSLBEG00000000214	rtcb	100	95.248	ENSONIG00000007474	rtcb	100	95.248	Oreochromis_niloticus
ENSLBEG00000000214	rtcb	100	93.069	ENSOANG00000005524	RTCB	100	93.069	Ornithorhynchus_anatinus
ENSLBEG00000000214	rtcb	93	93.191	ENSOCUG00000008270	RTCB	96	93.191	Oryctolagus_cuniculus
ENSLBEG00000000214	rtcb	100	95.644	ENSORLG00000020093	rtcb	100	95.644	Oryzias_latipes
ENSLBEG00000000214	rtcb	100	95.644	ENSORLG00020003706	rtcb	100	95.644	Oryzias_latipes_hni
ENSLBEG00000000214	rtcb	100	95.842	ENSORLG00015002968	rtcb	100	95.842	Oryzias_latipes_hsok
ENSLBEG00000000214	rtcb	100	95.446	ENSOMEG00000021278	rtcb	100	95.446	Oryzias_melastigma
ENSLBEG00000000214	rtcb	100	92.871	ENSOGAG00000001425	RTCB	100	92.871	Otolemur_garnettii
ENSLBEG00000000214	rtcb	100	93.663	ENSOARG00000018008	RTCB	100	93.663	Ovis_aries
ENSLBEG00000000214	rtcb	100	93.663	ENSPPAG00000028667	RTCB	100	93.663	Pan_paniscus
ENSLBEG00000000214	rtcb	100	93.663	ENSPPRG00000004038	RTCB	100	93.663	Panthera_pardus
ENSLBEG00000000214	rtcb	94	91.720	ENSPTIG00000020499	RTCB	97	91.932	Panthera_tigris_altaica
ENSLBEG00000000214	rtcb	100	93.663	ENSPTRG00000014287	RTCB	100	93.663	Pan_troglodytes
ENSLBEG00000000214	rtcb	100	93.069	ENSPANG00000016035	RTCB	100	93.069	Papio_anubis
ENSLBEG00000000214	rtcb	100	93.663	ENSPKIG00000001881	rtcb	100	93.663	Paramormyrops_kingsleyae
ENSLBEG00000000214	rtcb	91	93.478	ENSPSIG00000011690	RTCB	100	93.478	Pelodiscus_sinensis
ENSLBEG00000000214	rtcb	100	94.851	ENSPMGG00000016672	rtcb	100	94.851	Periophthalmus_magnuspinnatus
ENSLBEG00000000214	rtcb	100	93.267	ENSPEMG00000019548	Rtcb	100	93.267	Peromyscus_maniculatus_bairdii
ENSLBEG00000000214	rtcb	100	90.693	ENSPMAG00000005657	rtcb	100	90.693	Petromyzon_marinus
ENSLBEG00000000214	rtcb	100	93.465	ENSPCIG00000009467	RTCB	100	93.465	Phascolarctos_cinereus
ENSLBEG00000000214	rtcb	100	95.644	ENSPFOG00000003058	rtcb	100	95.644	Poecilia_formosa
ENSLBEG00000000214	rtcb	100	95.446	ENSPLAG00000017663	rtcb	100	95.446	Poecilia_latipinna
ENSLBEG00000000214	rtcb	100	95.644	ENSPMEG00000006227	rtcb	100	95.644	Poecilia_mexicana
ENSLBEG00000000214	rtcb	100	95.248	ENSPREG00000018467	rtcb	100	95.248	Poecilia_reticulata
ENSLBEG00000000214	rtcb	100	93.663	ENSPPYG00000011752	RTCB	100	93.663	Pongo_abelii
ENSLBEG00000000214	rtcb	93	77.119	ENSPCAG00000013641	RTCB	100	77.119	Procavia_capensis
ENSLBEG00000000214	rtcb	100	93.267	ENSPCOG00000017243	RTCB	100	93.267	Propithecus_coquereli
ENSLBEG00000000214	rtcb	93	92.553	ENSPVAG00000002380	RTCB	100	92.553	Pteropus_vampyrus
ENSLBEG00000000214	rtcb	100	93.663	ENSPNYG00000022760	rtcb	100	93.663	Pundamilia_nyererei
ENSLBEG00000000214	rtcb	100	94.851	ENSPNAG00000009209	rtcb	100	94.851	Pygocentrus_nattereri
ENSLBEG00000000214	rtcb	100	93.267	ENSRNOG00000004813	Rtcb	100	93.267	Rattus_norvegicus
ENSLBEG00000000214	rtcb	100	85.375	ENSRBIG00000042090	RTCB	100	85.375	Rhinopithecus_bieti
ENSLBEG00000000214	rtcb	100	88.713	ENSSBOG00000020085	-	100	88.713	Saimiri_boliviensis_boliviensis
ENSLBEG00000000214	rtcb	94	94.093	ENSSHAG00000016277	RTCB	100	94.093	Sarcophilus_harrisii
ENSLBEG00000000214	rtcb	100	92.673	ENSSFOG00015011572	RTCB	100	92.673	Scleropages_formosus
ENSLBEG00000000214	rtcb	100	94.257	ENSSFOG00015000763	rtcb	100	94.257	Scleropages_formosus
ENSLBEG00000000214	rtcb	100	92.475	ENSSMAG00000005096	rtcb	100	92.475	Scophthalmus_maximus
ENSLBEG00000000214	rtcb	100	96.040	ENSSDUG00000012605	rtcb	100	96.040	Seriola_dumerili
ENSLBEG00000000214	rtcb	100	96.040	ENSSLDG00000019458	rtcb	100	96.040	Seriola_lalandi_dorsalis
ENSLBEG00000000214	rtcb	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSLBEG00000000214	rtcb	100	92.871	ENSSPUG00000012814	RTCB	100	92.871	Sphenodon_punctatus
ENSLBEG00000000214	rtcb	100	96.238	ENSSPAG00000004623	rtcb	100	96.238	Stegastes_partitus
ENSLBEG00000000214	rtcb	100	93.663	ENSSSCG00000000158	RTCB	100	93.663	Sus_scrofa
ENSLBEG00000000214	rtcb	100	93.663	ENSTGUG00000010947	RTCB	99	93.663	Taeniopygia_guttata
ENSLBEG00000000214	rtcb	91	96.304	ENSTRUG00000009880	rtcb	100	96.304	Takifugu_rubripes
ENSLBEG00000000214	rtcb	100	93.465	ENSTNIG00000002484	rtcb	100	93.465	Tetraodon_nigroviridis
ENSLBEG00000000214	rtcb	100	80.396	ENSTBEG00000004418	RTCB	100	80.396	Tupaia_belangeri
ENSLBEG00000000214	rtcb	93	92.766	ENSTTRG00000006417	RTCB	100	92.766	Tursiops_truncatus
ENSLBEG00000000214	rtcb	100	93.663	ENSUAMG00000022792	RTCB	100	93.663	Ursus_americanus
ENSLBEG00000000214	rtcb	100	93.663	ENSUMAG00000017225	RTCB	100	93.663	Ursus_maritimus
ENSLBEG00000000214	rtcb	100	93.465	ENSVPAG00000005375	RTCB	100	93.465	Vicugna_pacos
ENSLBEG00000000214	rtcb	100	93.663	ENSVVUG00000023408	RTCB	100	93.663	Vulpes_vulpes
ENSLBEG00000000214	rtcb	100	93.267	ENSXETG00000011523	rtcb	100	93.267	Xenopus_tropicalis
ENSLBEG00000000214	rtcb	100	95.248	ENSXMAG00000002855	rtcb	100	95.248	Xiphophorus_maculatus