EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000000468 (Gene tree)
Gene ID: 109987034
Gene Symbol: ercc3
Alias: wu:fc25f08|xpb
Full Name: ERCC excision repair 3%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 13622 bases
Position: chrFKLU01000108.1:968647-982268
Accession: 109987034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000000665	ResIII	PF04851.15	2.2e-15	1	1
ENSLBEP00000000642	ResIII	PF04851.15	2.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000000719	-	2325	-	ENSLBEP00000000665	774 (aa)	-	-
ENSLBET00000000694	-	4989	XM_020637974	ENSLBEP00000000642	782 (aa)	XP_020493630	UPI0009B492D5

Gene Model

Click here to download ENSLBEG00000000468's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000000468's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000000468	ercc3	100	87.006	ENSG00000163161	ERCC3	99	95.031	Homo_sapiens
ENSLBEG00000000468	ercc3	100	95.019	ENSAPOG00000014383	ercc3	100	95.019	Acanthochromis_polyacanthus
ENSLBEG00000000468	ercc3	100	86.369	ENSAMEG00000016840	ERCC3	100	86.624	Ailuropoda_melanoleuca
ENSLBEG00000000468	ercc3	99	93.806	ENSACIG00000000126	ercc3	100	93.806	Amphilophus_citrinellus
ENSLBEG00000000468	ercc3	100	94.636	ENSAOCG00000009396	ercc3	100	95.147	Amphiprion_ocellaris
ENSLBEG00000000468	ercc3	100	94.508	ENSAPEG00000023077	ercc3	100	95.019	Amphiprion_percula
ENSLBEG00000000468	ercc3	100	95.275	ENSATEG00000014860	ercc3	100	95.275	Anabas_testudineus
ENSLBEG00000000468	ercc3	91	87.606	ENSAPLG00000012068	ERCC3	98	87.606	Anas_platyrhynchos
ENSLBEG00000000468	ercc3	92	88.072	ENSACAG00000009919	ERCC3	100	88.072	Anolis_carolinensis
ENSLBEG00000000468	ercc3	100	87.134	ENSANAG00000031091	ERCC3	100	87.134	Aotus_nancymaae
ENSLBEG00000000468	ercc3	100	94.891	ENSACLG00000022508	ercc3	100	94.891	Astatotilapia_calliptera
ENSLBEG00000000468	ercc3	100	91.944	ENSAMXG00000036947	ercc3	100	91.944	Astyanax_mexicanus
ENSLBEG00000000468	ercc3	100	86.369	ENSBTAG00000020777	ERCC3	100	86.369	Bos_taurus
ENSLBEG00000000468	ercc3	99	61.635	WBGene00013441	xpb-1	99	61.905	Caenorhabditis_elegans
ENSLBEG00000000468	ercc3	100	87.006	ENSCJAG00000010416	ERCC3	100	87.006	Callithrix_jacchus
ENSLBEG00000000468	ercc3	97	87.583	ENSCAFG00000004497	ERCC3	100	86.224	Canis_familiaris
ENSLBEG00000000468	ercc3	97	87.583	ENSCAFG00020003495	ERCC3	100	86.224	Canis_lupus_dingo
ENSLBEG00000000468	ercc3	100	86.369	ENSCHIG00000014551	ERCC3	100	86.369	Capra_hircus
ENSLBEG00000000468	ercc3	99	86.469	ENSTSYG00000004137	ERCC3	99	86.469	Carlito_syrichta
ENSLBEG00000000468	ercc3	89	73.199	ENSCAPG00000017027	ERCC3	100	73.199	Cavia_aperea
ENSLBEG00000000468	ercc3	100	85.478	ENSCPOG00000002144	ERCC3	100	85.987	Cavia_porcellus
ENSLBEG00000000468	ercc3	100	87.006	ENSCCAG00000024421	ERCC3	100	87.006	Cebus_capucinus
ENSLBEG00000000468	ercc3	100	87.006	ENSCATG00000032313	ERCC3	100	87.006	Cercocebus_atys
ENSLBEG00000000468	ercc3	100	85.987	ENSCLAG00000002965	ERCC3	96	86.624	Chinchilla_lanigera
ENSLBEG00000000468	ercc3	100	86.879	ENSCSAG00000016827	ERCC3	100	86.879	Chlorocebus_sabaeus
ENSLBEG00000000468	ercc3	83	93.567	ENSCHOG00000007414	ERCC3	83	93.567	Choloepus_hoffmanni
ENSLBEG00000000468	ercc3	92	88.766	ENSCPBG00000013638	ERCC3	100	88.766	Chrysemys_picta_bellii
ENSLBEG00000000468	ercc3	96	70.888	ENSCING00000002867	ercc3	96	70.888	Ciona_intestinalis
ENSLBEG00000000468	ercc3	100	87.006	ENSCANG00000007094	ERCC3	100	87.006	Colobus_angolensis_palliatus
ENSLBEG00000000468	ercc3	100	86.497	ENSCGRG00001009426	Ercc3	100	86.752	Cricetulus_griseus_chok1gshd
ENSLBEG00000000468	ercc3	97	86.352	ENSCGRG00000015547	Ercc3	100	86.614	Cricetulus_griseus_crigri
ENSLBEG00000000468	ercc3	100	91.975	ENSCSEG00000016479	ercc3	100	91.975	Cynoglossus_semilaevis
ENSLBEG00000000468	ercc3	100	93.231	ENSCVAG00000015177	ercc3	100	93.231	Cyprinodon_variegatus
ENSLBEG00000000468	ercc3	97	93.263	ENSDARG00000002402	ercc3	100	92.465	Danio_rerio
ENSLBEG00000000468	ercc3	57	91.837	ENSDNOG00000035027	ERCC3	95	91.837	Dasypus_novemcinctus
ENSLBEG00000000468	ercc3	96	88.079	ENSDORG00000004671	Ercc3	100	86.352	Dipodomys_ordii
ENSLBEG00000000468	ercc3	99	67.669	FBgn0001179	hay	99	67.503	Drosophila_melanogaster
ENSLBEG00000000468	ercc3	90	87.898	ENSETEG00000019887	ERCC3	90	87.898	Echinops_telfairi
ENSLBEG00000000468	ercc3	99	79.772	ENSEBUG00000009773	ercc3	99	79.772	Eptatretus_burgeri
ENSLBEG00000000468	ercc3	100	84.099	ENSEASG00005022466	ERCC3	100	84.348	Equus_asinus_asinus
ENSLBEG00000000468	ercc3	100	86.497	ENSECAG00000006589	ERCC3	100	86.497	Equus_caballus
ENSLBEG00000000468	ercc3	93	87.397	ENSEEUG00000001057	ERCC3	97	88.467	Erinaceus_europaeus
ENSLBEG00000000468	ercc3	100	91.454	ENSELUG00000000089	ercc3	99	91.454	Esox_lucius
ENSLBEG00000000468	ercc3	100	86.369	ENSFCAG00000006989	ERCC3	100	86.624	Felis_catus
ENSLBEG00000000468	ercc3	99	85.548	ENSFALG00000003936	ERCC3	99	85.677	Ficedula_albicollis
ENSLBEG00000000468	ercc3	100	85.223	ENSFDAG00000011924	ERCC3	100	85.478	Fukomys_damarensis
ENSLBEG00000000468	ercc3	100	93.103	ENSFHEG00000005185	ercc3	100	93.103	Fundulus_heteroclitus
ENSLBEG00000000468	ercc3	100	89.911	ENSGMOG00000018032	ercc3	99	89.911	Gadus_morhua
ENSLBEG00000000468	ercc3	96	87.152	ENSGALG00000011515	ERCC3	100	85.714	Gallus_gallus
ENSLBEG00000000468	ercc3	100	93.359	ENSGAFG00000011936	ercc3	100	93.359	Gambusia_affinis
ENSLBEG00000000468	ercc3	100	93.885	ENSGACG00000015218	ercc3	100	93.885	Gasterosteus_aculeatus
ENSLBEG00000000468	ercc3	92	88.350	ENSGAGG00000018579	ERCC3	100	88.488	Gopherus_agassizii
ENSLBEG00000000468	ercc3	100	87.006	ENSGGOG00000015255	ERCC3	100	87.006	Gorilla_gorilla
ENSLBEG00000000468	ercc3	100	94.891	ENSHBUG00000003818	ercc3	100	94.891	Haplochromis_burtoni
ENSLBEG00000000468	ercc3	100	85.605	ENSHGLG00000011014	ERCC3	100	86.115	Heterocephalus_glaber_female
ENSLBEG00000000468	ercc3	100	85.605	ENSHGLG00100013806	ERCC3	100	86.115	Heterocephalus_glaber_male
ENSLBEG00000000468	ercc3	100	92.199	ENSHCOG00000016924	ercc3	100	92.199	Hippocampus_comes
ENSLBEG00000000468	ercc3	100	91.188	ENSIPUG00000021000	ercc3	100	91.188	Ictalurus_punctatus
ENSLBEG00000000468	ercc3	100	85.987	ENSSTOG00000011001	ERCC3	100	86.242	Ictidomys_tridecemlineatus
ENSLBEG00000000468	ercc3	90	86.864	ENSJJAG00000001117	Ercc3	100	86.864	Jaculus_jaculus
ENSLBEG00000000468	ercc3	100	92.720	ENSKMAG00000021764	ercc3	100	92.720	Kryptolebias_marmoratus
ENSLBEG00000000468	ercc3	96	83.681	ENSLACG00000014815	ERCC3	100	82.789	Latimeria_chalumnae
ENSLBEG00000000468	ercc3	90	88.559	ENSLOCG00000010907	ercc3	87	88.559	Lepisosteus_oculatus
ENSLBEG00000000468	ercc3	100	85.860	ENSLAFG00000014866	ERCC3	100	86.115	Loxodonta_africana
ENSLBEG00000000468	ercc3	100	87.006	ENSMFAG00000003370	ERCC3	100	87.006	Macaca_fascicularis
ENSLBEG00000000468	ercc3	100	83.270	ENSMNEG00000004215	ERCC3	100	83.270	Macaca_nemestrina
ENSLBEG00000000468	ercc3	100	87.006	ENSMLEG00000042061	ERCC3	100	87.006	Mandrillus_leucophaeus
ENSLBEG00000000468	ercc3	100	93.742	ENSMAMG00000004505	ercc3	99	93.742	Mastacembelus_armatus
ENSLBEG00000000468	ercc3	100	94.891	ENSMZEG00005004854	ercc3	100	94.891	Maylandia_zebra
ENSLBEG00000000468	ercc3	90	88.260	ENSMGAG00000011706	ERCC3	100	88.260	Meleagris_gallopavo
ENSLBEG00000000468	ercc3	100	86.514	ENSMAUG00000004515	Ercc3	100	86.768	Mesocricetus_auratus
ENSLBEG00000000468	ercc3	100	85.987	ENSMICG00000009578	ERCC3	100	86.242	Microcebus_murinus
ENSLBEG00000000468	ercc3	100	86.624	ENSMOCG00000021767	Ercc3	100	86.879	Microtus_ochrogaster
ENSLBEG00000000468	ercc3	99	94.057	ENSMMOG00000018174	ercc3	99	94.057	Mola_mola
ENSLBEG00000000468	ercc3	96	87.815	ENSMODG00000018695	ERCC3	100	87.006	Monodelphis_domestica
ENSLBEG00000000468	ercc3	100	92.848	ENSMALG00000014944	ercc3	100	93.359	Monopterus_albus
ENSLBEG00000000468	ercc3	100	87.006	MGP_CAROLIEiJ_G0022075	Ercc3	100	87.261	Mus_caroli
ENSLBEG00000000468	ercc3	100	86.752	ENSMUSG00000024382	Ercc3	100	87.006	Mus_musculus
ENSLBEG00000000468	ercc3	100	86.879	MGP_PahariEiJ_G0018809	Ercc3	100	87.134	Mus_pahari
ENSLBEG00000000468	ercc3	100	86.497	MGP_SPRETEiJ_G0022987	Ercc3	100	86.752	Mus_spretus
ENSLBEG00000000468	ercc3	100	86.242	ENSMPUG00000012021	ERCC3	100	86.497	Mustela_putorius_furo
ENSLBEG00000000468	ercc3	93	84.636	ENSMLUG00000007429	ERCC3	99	84.636	Myotis_lucifugus
ENSLBEG00000000468	ercc3	97	85.471	ENSNGAG00000019598	Ercc3	99	88.195	Nannospalax_galili
ENSLBEG00000000468	ercc3	100	94.891	ENSNBRG00000019074	ercc3	100	94.891	Neolamprologus_brichardi
ENSLBEG00000000468	ercc3	92	86.250	ENSNLEG00000015665	ERCC3	97	86.250	Nomascus_leucogenys
ENSLBEG00000000468	ercc3	100	84.841	ENSOPRG00000004553	ERCC3	100	84.968	Ochotona_princeps
ENSLBEG00000000468	ercc3	100	86.115	ENSODEG00000005795	ERCC3	100	86.752	Octodon_degus
ENSLBEG00000000468	ercc3	100	94.636	ENSONIG00000003255	ercc3	100	94.636	Oreochromis_niloticus
ENSLBEG00000000468	ercc3	100	86.369	ENSOCUG00000002248	ERCC3	100	86.624	Oryctolagus_cuniculus
ENSLBEG00000000468	ercc3	100	92.593	ENSORLG00000004393	ercc3	100	92.593	Oryzias_latipes
ENSLBEG00000000468	ercc3	100	92.602	ENSORLG00020017718	ercc3	99	93.767	Oryzias_latipes_hni
ENSLBEG00000000468	ercc3	100	92.720	ENSORLG00015015695	ercc3	100	92.720	Oryzias_latipes_hsok
ENSLBEG00000000468	ercc3	100	92.976	ENSOMEG00000015374	ercc3	100	92.976	Oryzias_melastigma
ENSLBEG00000000468	ercc3	100	85.987	ENSOGAG00000009103	ERCC3	100	86.242	Otolemur_garnettii
ENSLBEG00000000468	ercc3	100	86.242	ENSOARG00000016147	ERCC3	100	86.242	Ovis_aries
ENSLBEG00000000468	ercc3	100	87.006	ENSPPAG00000036166	ERCC3	100	87.006	Pan_paniscus
ENSLBEG00000000468	ercc3	100	86.497	ENSPPRG00000001305	ERCC3	100	86.752	Panthera_pardus
ENSLBEG00000000468	ercc3	92	88.488	ENSPTIG00000016969	ERCC3	100	88.488	Panthera_tigris_altaica
ENSLBEG00000000468	ercc3	100	87.006	ENSPTRG00000046940	ERCC3	100	87.006	Pan_troglodytes
ENSLBEG00000000468	ercc3	100	87.006	ENSPANG00000007699	ERCC3	100	87.006	Papio_anubis
ENSLBEG00000000468	ercc3	100	90.689	ENSPKIG00000001319	ercc3	99	91.788	Paramormyrops_kingsleyae
ENSLBEG00000000468	ercc3	92	88.072	ENSPSIG00000014682	ERCC3	100	88.072	Pelodiscus_sinensis
ENSLBEG00000000468	ercc3	97	92.328	ENSPMGG00000017885	ercc3	99	91.699	Periophthalmus_magnuspinnatus
ENSLBEG00000000468	ercc3	100	87.006	ENSPEMG00000013733	Ercc3	100	87.261	Peromyscus_maniculatus_bairdii
ENSLBEG00000000468	ercc3	90	78.291	ENSPMAG00000005081	ercc3	99	78.291	Petromyzon_marinus
ENSLBEG00000000468	ercc3	100	86.862	ENSPCIG00000011821	ERCC3	100	87.516	Phascolarctos_cinereus
ENSLBEG00000000468	ercc3	98	93.490	ENSPFOG00000015604	ercc3	100	92.848	Poecilia_formosa
ENSLBEG00000000468	ercc3	98	91.711	ENSPLAG00000022245	ercc3	100	94.452	Poecilia_latipinna
ENSLBEG00000000468	ercc3	98	93.490	ENSPMEG00000016987	ercc3	100	92.848	Poecilia_mexicana
ENSLBEG00000000468	ercc3	100	92.848	ENSPREG00000020921	ercc3	100	92.848	Poecilia_reticulata
ENSLBEG00000000468	ercc3	100	86.260	ENSPPYG00000012769	ERCC3	100	86.260	Pongo_abelii
ENSLBEG00000000468	ercc3	100	86.369	ENSPCOG00000024903	ERCC3	100	86.369	Propithecus_coquereli
ENSLBEG00000000468	ercc3	90	86.770	ENSPVAG00000013774	ERCC3	90	86.770	Pteropus_vampyrus
ENSLBEG00000000468	ercc3	100	94.891	ENSPNYG00000001208	ercc3	100	94.891	Pundamilia_nyererei
ENSLBEG00000000468	ercc3	100	92.209	ENSPNAG00000005748	ercc3	100	92.209	Pygocentrus_nattereri
ENSLBEG00000000468	ercc3	100	86.879	ENSRNOG00000013180	Ercc3	100	87.134	Rattus_norvegicus
ENSLBEG00000000468	ercc3	100	87.006	ENSRBIG00000027692	ERCC3	100	87.006	Rhinopithecus_bieti
ENSLBEG00000000468	ercc3	100	87.006	ENSRROG00000040673	ERCC3	100	87.006	Rhinopithecus_roxellana
ENSLBEG00000000468	ercc3	92	54.681	YIL143C	SSL2	85	54.681	Saccharomyces_cerevisiae
ENSLBEG00000000468	ercc3	100	86.369	ENSSBOG00000023079	ERCC3	100	86.369	Saimiri_boliviensis_boliviensis
ENSLBEG00000000468	ercc3	96	88.212	ENSSHAG00000007423	ERCC3	100	87.261	Sarcophilus_harrisii
ENSLBEG00000000468	ercc3	96	91.788	ENSSFOG00015012753	ercc3	100	90.561	Scleropages_formosus
ENSLBEG00000000468	ercc3	100	93.766	ENSSMAG00000011915	ercc3	100	93.766	Scophthalmus_maximus
ENSLBEG00000000468	ercc3	100	95.658	ENSSDUG00000021181	ercc3	100	95.658	Seriola_dumerili
ENSLBEG00000000468	ercc3	100	95.658	ENSSLDG00000008744	ercc3	98	95.658	Seriola_lalandi_dorsalis
ENSLBEG00000000468	ercc3	55	79.080	ENSSARG00000000751	-	85	79.080	Sorex_araneus
ENSLBEG00000000468	ercc3	90	86.846	ENSSPUG00000015183	ERCC3	91	86.846	Sphenodon_punctatus
ENSLBEG00000000468	ercc3	100	95.530	ENSSPAG00000004748	ercc3	100	95.530	Stegastes_partitus
ENSLBEG00000000468	ercc3	100	86.624	ENSSSCG00000015721	ERCC3	100	87.898	Sus_scrofa
ENSLBEG00000000468	ercc3	99	87.080	ENSTGUG00000004920	-	99	87.209	Taeniopygia_guttata
ENSLBEG00000000468	ercc3	100	92.082	ENSTRUG00000017185	ercc3	100	92.082	Takifugu_rubripes
ENSLBEG00000000468	ercc3	97	89.777	ENSTNIG00000005457	ercc3	99	90.993	Tetraodon_nigroviridis
ENSLBEG00000000468	ercc3	80	87.420	ENSTBEG00000009381	ERCC3	81	87.420	Tupaia_belangeri
ENSLBEG00000000468	ercc3	68	92.439	ENSUAMG00000009589	-	100	92.439	Ursus_americanus
ENSLBEG00000000468	ercc3	100	86.242	ENSUMAG00000008361	ERCC3	100	86.497	Ursus_maritimus
ENSLBEG00000000468	ercc3	92	88.072	ENSVVUG00000010431	ERCC3	100	88.072	Vulpes_vulpes
ENSLBEG00000000468	ercc3	100	86.023	ENSXETG00000033646	ercc3	100	86.150	Xenopus_tropicalis
ENSLBEG00000000468	ercc3	99	93.152	ENSXCOG00000001791	ercc3	99	93.152	Xiphophorus_couchianus
ENSLBEG00000000468	ercc3	100	93.742	ENSXMAG00000003641	ercc3	100	93.742	Xiphophorus_maculatus