EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000000728 (Gene tree)
Gene ID: 109977373
Gene Symbol: -
Alias: -
Full Name: regulator of nonsense transcripts 2-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 8326 bases
Position: chrFKLU01005271.1:6423-14748
Accession: 109977373
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000000945	MIF4G	PF02854.19	5.9e-74	1	3
ENSLBEP00000000945	MIF4G	PF02854.19	5.9e-74	2	3
ENSLBEP00000000945	MIF4G	PF02854.19	5.9e-74	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000001015	-	3216	XM_020627131	ENSLBEP00000000945	1071 (aa)	XP_020482787	-

Gene Model

Click here to download ENSLBEG00000000728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000000728's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000000728	-	94	96.869	ENSLBEG00000016394	-	83	97.527

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000000728	-	93	82.139	ENSG00000151461	UPF2	80	82.041	Homo_sapiens
ENSLBEG00000000728	-	93	90.049	ENSAPOG00000015837	UPF2	82	89.289	Acanthochromis_polyacanthus
ENSLBEG00000000728	-	93	83.202	ENSAMEG00000004586	UPF2	80	83.104	Ailuropoda_melanoleuca
ENSLBEG00000000728	-	94	92.564	ENSACIG00000018078	UPF2	80	92.654	Amphilophus_citrinellus
ENSLBEG00000000728	-	94	92.857	ENSAOCG00000016766	UPF2	81	93.472	Amphiprion_ocellaris
ENSLBEG00000000728	-	94	92.955	ENSAPEG00000019084	UPF2	81	93.571	Amphiprion_percula
ENSLBEG00000000728	-	94	92.270	ENSATEG00000021677	UPF2	79	92.360	Anabas_testudineus
ENSLBEG00000000728	-	93	78.613	ENSAPLG00000010287	UPF2	71	86.002	Anas_platyrhynchos
ENSLBEG00000000728	-	93	81.809	ENSACAG00000009259	UPF2	80	81.711	Anolis_carolinensis
ENSLBEG00000000728	-	83	77.987	ENSANAG00000028451	UPF2	71	77.938	Aotus_nancymaae
ENSLBEG00000000728	-	94	92.368	ENSACLG00000012696	UPF2	80	92.458	Astatotilapia_calliptera
ENSLBEG00000000728	-	93	87.685	ENSAMXG00000013700	UPF2	79	85.222	Astyanax_mexicanus
ENSLBEG00000000728	-	93	82.809	ENSBTAG00000000288	UPF2	83	82.711	Bos_taurus
ENSLBEG00000000728	-	93	82.024	ENSCJAG00000020685	UPF2	81	79.862	Callithrix_jacchus
ENSLBEG00000000728	-	93	83.202	ENSCAFG00000004839	UPF2	80	83.104	Canis_familiaris
ENSLBEG00000000728	-	93	83.202	ENSCAFG00020005882	UPF2	87	85.825	Canis_lupus_dingo
ENSLBEG00000000728	-	93	82.809	ENSCHIG00000020359	UPF2	80	82.711	Capra_hircus
ENSLBEG00000000728	-	95	81.034	ENSTSYG00000000935	UPF2	84	80.843	Carlito_syrichta
ENSLBEG00000000728	-	93	75.480	ENSCAPG00000016658	UPF2	75	77.187	Cavia_aperea
ENSLBEG00000000728	-	90	80.343	ENSCPOG00000008809	UPF2	71	83.278	Cavia_porcellus
ENSLBEG00000000728	-	93	76.667	ENSCCAG00000035991	UPF2	79	74.096	Cebus_capucinus
ENSLBEG00000000728	-	93	82.336	ENSCATG00000032679	UPF2	80	82.237	Cercocebus_atys
ENSLBEG00000000728	-	93	81.318	ENSCLAG00000011434	UPF2	80	81.219	Chinchilla_lanigera
ENSLBEG00000000728	-	93	82.336	ENSCSAG00000013372	UPF2	80	82.237	Chlorocebus_sabaeus
ENSLBEG00000000728	-	73	87.583	ENSCHOG00000000422	UPF2	62	87.583	Choloepus_hoffmanni
ENSLBEG00000000728	-	93	80.610	ENSCPBG00000027823	UPF2	79	80.512	Chrysemys_picta_bellii
ENSLBEG00000000728	-	73	49.015	ENSCSAVG00000007772	-	76	50.267	Ciona_savignyi
ENSLBEG00000000728	-	93	82.336	ENSCANG00000040396	UPF2	81	82.237	Colobus_angolensis_palliatus
ENSLBEG00000000728	-	93	82.793	ENSCGRG00001019347	Upf2	80	82.793	Cricetulus_griseus_chok1gshd
ENSLBEG00000000728	-	93	82.793	ENSCGRG00000017993	Upf2	80	82.793	Cricetulus_griseus_crigri
ENSLBEG00000000728	-	92	86.508	ENSCSEG00000003520	UPF2	80	85.714	Cynoglossus_semilaevis
ENSLBEG00000000728	-	93	90.246	ENSCVAG00000006167	UPF2	81	90.504	Cyprinodon_variegatus
ENSLBEG00000000728	-	93	82.809	ENSDNOG00000018160	UPF2	80	82.711	Dasypus_novemcinctus
ENSLBEG00000000728	-	93	82.515	ENSDORG00000002478	Upf2	80	82.515	Dipodomys_ordii
ENSLBEG00000000728	-	86	38.075	FBgn0029992	Upf2	71	38.939	Drosophila_melanogaster
ENSLBEG00000000728	-	62	69.357	ENSEBUG00000012448	-	71	69.058	Eptatretus_burgeri
ENSLBEG00000000728	-	93	81.809	ENSEASG00005019274	UPF2	85	81.711	Equus_asinus_asinus
ENSLBEG00000000728	-	93	81.809	ENSECAG00000017022	UPF2	80	81.711	Equus_caballus
ENSLBEG00000000728	-	93	86.489	ENSELUG00000012014	UPF2	80	86.092	Esox_lucius
ENSLBEG00000000728	-	93	83.104	ENSFCAG00000005785	UPF2	80	83.006	Felis_catus
ENSLBEG00000000728	-	93	82.891	ENSFALG00000001889	UPF2	78	82.694	Ficedula_albicollis
ENSLBEG00000000728	-	93	81.219	ENSFDAG00000014348	UPF2	80	81.121	Fukomys_damarensis
ENSLBEG00000000728	-	93	89.951	ENSFHEG00000009826	UPF2	80	89.515	Fundulus_heteroclitus
ENSLBEG00000000728	-	82	88.466	ENSGMOG00000005557	UPF2	81	86.022	Gadus_morhua
ENSLBEG00000000728	-	93	83.104	ENSGALG00000033772	UPF2	80	82.711	Gallus_gallus
ENSLBEG00000000728	-	94	89.463	ENSGAFG00000020867	UPF2	80	89.030	Gambusia_affinis
ENSLBEG00000000728	-	94	92.008	ENSGACG00000001080	UPF2	80	91.610	Gasterosteus_aculeatus
ENSLBEG00000000728	-	93	81.925	ENSGAGG00000002700	UPF2	80	81.827	Gopherus_agassizii
ENSLBEG00000000728	-	93	82.139	ENSGGOG00000001479	UPF2	80	82.041	Gorilla_gorilla
ENSLBEG00000000728	-	94	92.564	ENSHBUG00000004249	UPF2	80	92.654	Haplochromis_burtoni
ENSLBEG00000000728	-	92	82.679	ENSHGLG00000015176	-	78	82.578	Heterocephalus_glaber_female
ENSLBEG00000000728	-	93	70.965	ENSHGLG00000003822	-	79	70.965	Heterocephalus_glaber_female
ENSLBEG00000000728	-	92	79.557	ENSHGLG00100010036	UPF2	67	87.035	Heterocephalus_glaber_male
ENSLBEG00000000728	-	94	88.608	ENSHCOG00000004025	UPF2	80	88.402	Hippocampus_comes
ENSLBEG00000000728	-	94	86.160	ENSIPUG00000015524	UPF2	80	85.380	Ictalurus_punctatus
ENSLBEG00000000728	-	93	82.809	ENSSTOG00000013075	UPF2	80	82.809	Ictidomys_tridecemlineatus
ENSLBEG00000000728	-	93	78.958	ENSJJAG00000004913	Upf2	80	80.236	Jaculus_jaculus
ENSLBEG00000000728	-	93	91.034	ENSKMAG00000001071	UPF2	80	91.296	Kryptolebias_marmoratus
ENSLBEG00000000728	-	92	76.078	ENSLACG00000015945	UPF2	79	76.621	Latimeria_chalumnae
ENSLBEG00000000728	-	92	86.853	ENSLOCG00000015698	UPF2	79	86.454	Lepisosteus_oculatus
ENSLBEG00000000728	-	93	82.336	ENSMFAG00000043865	UPF2	80	82.237	Macaca_fascicularis
ENSLBEG00000000728	-	93	82.336	ENSMMUG00000008241	UPF2	80	82.237	Macaca_mulatta
ENSLBEG00000000728	-	93	82.336	ENSMNEG00000008062	UPF2	99	82.237	Macaca_nemestrina
ENSLBEG00000000728	-	93	82.336	ENSMLEG00000036120	UPF2	80	82.237	Mandrillus_leucophaeus
ENSLBEG00000000728	-	94	90.313	ENSMAMG00000018276	UPF2	82	92.240	Mastacembelus_armatus
ENSLBEG00000000728	-	94	92.368	ENSMZEG00005021595	UPF2	80	92.458	Maylandia_zebra
ENSLBEG00000000728	-	93	82.823	ENSMGAG00000004573	UPF2	71	85.762	Meleagris_gallopavo
ENSLBEG00000000728	-	93	80.236	ENSMAUG00000016512	Upf2	79	80.236	Mesocricetus_auratus
ENSLBEG00000000728	-	92	84.205	ENSMICG00000001716	UPF2	81	84.105	Microcebus_murinus
ENSLBEG00000000728	-	93	81.299	ENSMOCG00000008263	Upf2	80	81.201	Microtus_ochrogaster
ENSLBEG00000000728	-	93	91.889	ENSMMOG00000006528	UPF2	82	91.691	Mola_mola
ENSLBEG00000000728	-	93	79.882	ENSMODG00000016794	UPF2	71	85.635	Monodelphis_domestica
ENSLBEG00000000728	-	93	93.571	ENSMALG00000002663	UPF2	80	93.571	Monopterus_albus
ENSLBEG00000000728	-	93	82.498	MGP_CAROLIEiJ_G0023157	Upf2	77	85.537	Mus_caroli
ENSLBEG00000000728	-	93	82.596	ENSMUSG00000043241	Upf2	80	82.596	Mus_musculus
ENSLBEG00000000728	-	93	82.596	MGP_PahariEiJ_G0019217	Upf2	80	82.596	Mus_pahari
ENSLBEG00000000728	-	93	82.793	MGP_SPRETEiJ_G0024075	Upf2	80	82.793	Mus_spretus
ENSLBEG00000000728	-	93	83.202	ENSMPUG00000001064	UPF2	80	83.104	Mustela_putorius_furo
ENSLBEG00000000728	-	93	81.765	ENSMLUG00000000228	UPF2	80	81.800	Myotis_lucifugus
ENSLBEG00000000728	-	94	92.564	ENSNBRG00000013629	UPF2	80	92.654	Neolamprologus_brichardi
ENSLBEG00000000728	-	93	82.237	ENSNLEG00000012058	UPF2	81	82.139	Nomascus_leucogenys
ENSLBEG00000000728	-	60	88.732	ENSOPRG00000006801	-	52	88.732	Ochotona_princeps
ENSLBEG00000000728	-	93	81.102	ENSODEG00000001290	UPF2	80	81.004	Octodon_degus
ENSLBEG00000000728	-	94	92.564	ENSONIG00000017991	UPF2	80	92.654	Oreochromis_niloticus
ENSLBEG00000000728	-	93	81.134	ENSOCUG00000006230	UPF2	80	81.036	Oryctolagus_cuniculus
ENSLBEG00000000728	-	94	89.237	ENSORLG00000017189	UPF2	80	89.324	Oryzias_latipes
ENSLBEG00000000728	-	94	89.335	ENSORLG00020005969	UPF2	80	89.422	Oryzias_latipes_hni
ENSLBEG00000000728	-	94	89.335	ENSORLG00015005713	UPF2	80	89.422	Oryzias_latipes_hsok
ENSLBEG00000000728	-	94	85.225	ENSOMEG00000023420	UPF2	77	85.309	Oryzias_melastigma
ENSLBEG00000000728	-	93	82.417	ENSOGAG00000005796	UPF2	80	82.024	Otolemur_garnettii
ENSLBEG00000000728	-	92	84.205	ENSOARG00000014587	UPF2	78	84.105	Ovis_aries
ENSLBEG00000000728	-	93	81.551	ENSPPAG00000037953	UPF2	80	81.452	Pan_paniscus
ENSLBEG00000000728	-	93	83.104	ENSPPRG00000000690	UPF2	80	83.006	Panthera_pardus
ENSLBEG00000000728	-	93	83.104	ENSPTIG00000008867	UPF2	80	83.006	Panthera_tigris_altaica
ENSLBEG00000000728	-	93	82.139	ENSPTRG00000002291	UPF2	80	82.041	Pan_troglodytes
ENSLBEG00000000728	-	93	82.336	ENSPANG00000023399	UPF2	80	82.237	Papio_anubis
ENSLBEG00000000728	-	93	86.332	ENSPKIG00000025502	UPF2	79	84.661	Paramormyrops_kingsleyae
ENSLBEG00000000728	-	70	81.974	ENSPSIG00000015158	UPF2	95	81.842	Pelodiscus_sinensis
ENSLBEG00000000728	-	93	88.692	ENSPMGG00000005259	UPF2	80	88.692	Periophthalmus_magnuspinnatus
ENSLBEG00000000728	-	84	77.011	ENSPEMG00000015731	Upf2	79	77.011	Peromyscus_maniculatus_bairdii
ENSLBEG00000000728	-	93	82.399	ENSPCIG00000006656	UPF2	71	85.604	Phascolarctos_cinereus
ENSLBEG00000000728	-	94	89.659	ENSPFOG00000017118	UPF2	80	89.226	Poecilia_formosa
ENSLBEG00000000728	-	94	89.659	ENSPLAG00000005094	UPF2	80	89.226	Poecilia_latipinna
ENSLBEG00000000728	-	94	89.756	ENSPMEG00000017009	UPF2	80	89.324	Poecilia_mexicana
ENSLBEG00000000728	-	93	89.526	ENSPREG00000021880	UPF2	80	89.184	Poecilia_reticulata
ENSLBEG00000000728	-	52	84.775	ENSPPYG00000002089	-	69	84.775	Pongo_abelii
ENSLBEG00000000728	-	93	67.289	ENSPCAG00000000684	UPF2	79	67.191	Procavia_capensis
ENSLBEG00000000728	-	93	82.809	ENSPCOG00000021656	UPF2	82	82.711	Propithecus_coquereli
ENSLBEG00000000728	-	93	74.190	ENSPVAG00000017286	UPF2	80	74.092	Pteropus_vampyrus
ENSLBEG00000000728	-	94	89.335	ENSPNYG00000017096	UPF2	80	89.422	Pundamilia_nyererei
ENSLBEG00000000728	-	94	86.479	ENSPNAG00000009357	UPF2	80	86.452	Pygocentrus_nattereri
ENSLBEG00000000728	-	93	80.924	ENSRNOG00000023593	Upf2	79	87.033	Rattus_norvegicus
ENSLBEG00000000728	-	93	81.139	ENSRBIG00000037780	UPF2	80	79.351	Rhinopithecus_bieti
ENSLBEG00000000728	-	93	82.336	ENSRROG00000043547	UPF2	80	82.237	Rhinopithecus_roxellana
ENSLBEG00000000728	-	93	82.024	ENSSBOG00000020012	UPF2	82	79.862	Saimiri_boliviensis_boliviensis
ENSLBEG00000000728	-	94	83.430	ENSSFOG00015023788	upf2	80	83.024	Scleropages_formosus
ENSLBEG00000000728	-	82	88.839	ENSSMAG00000007637	UPF2	80	89.320	Scophthalmus_maximus
ENSLBEG00000000728	-	94	92.857	ENSSDUG00000017244	UPF2	82	93.472	Seriola_dumerili
ENSLBEG00000000728	-	93	93.110	ENSSLDG00000016866	UPF2	82	93.110	Seriola_lalandi_dorsalis
ENSLBEG00000000728	-	93	81.311	ENSSARG00000008615	UPF2	71	84.123	Sorex_araneus
ENSLBEG00000000728	-	93	79.253	ENSSPUG00000014544	UPF2	80	79.154	Sphenodon_punctatus
ENSLBEG00000000728	-	55	84.918	ENSSSCG00000011117	-	75	84.918	Sus_scrofa
ENSLBEG00000000728	-	93	82.596	ENSTGUG00000002163	-	80	82.498	Taeniopygia_guttata
ENSLBEG00000000728	-	93	91.296	ENSTRUG00000007519	UPF2	79	90.597	Takifugu_rubripes
ENSLBEG00000000728	-	98	85.234	ENSTNIG00000004453	UPF2	80	91.459	Tetraodon_nigroviridis
ENSLBEG00000000728	-	92	75.529	ENSTBEG00000012679	UPF2	78	76.234	Tupaia_belangeri
ENSLBEG00000000728	-	93	81.219	ENSTTRG00000016388	UPF2	80	81.121	Tursiops_truncatus
ENSLBEG00000000728	-	93	83.104	ENSUAMG00000023560	UPF2	87	83.006	Ursus_americanus
ENSLBEG00000000728	-	93	83.104	ENSUMAG00000012953	UPF2	67	85.936	Ursus_maritimus
ENSLBEG00000000728	-	93	79.371	ENSVPAG00000006763	UPF2	80	79.273	Vicugna_pacos
ENSLBEG00000000728	-	93	83.202	ENSVVUG00000006166	UPF2	85	83.104	Vulpes_vulpes
ENSLBEG00000000728	-	93	78.122	ENSXETG00000033103	UPF2	70	85.475	Xenopus_tropicalis
ENSLBEG00000000728	-	94	89.561	ENSXCOG00000011604	UPF2	80	89.128	Xiphophorus_couchianus
ENSLBEG00000000728	-	94	89.756	ENSXMAG00000017209	UPF2	80	89.324	Xiphophorus_maculatus