EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000000730 (Gene tree)
Gene ID: 110000217
Gene Symbol: r3hdm4
Alias: zgc:158644
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 7596 bases
Position: chrFKLU01000014.1:2556797-2564392
Accession: 110000217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000000886	R3H	PF01424.22	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000000953	-	3578	XM_020655426	ENSLBEP00000000886	256 (aa)	XP_020511082	UPI0009B3E1BC

Gene Model

Click here to download ENSLBEG00000000730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000000730's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000000730	r3hdm4	91	55.462	ENSG00000198858	R3HDM4	90	56.250	Homo_sapiens
ENSLBEG00000000730	r3hdm4	91	55.462	ENSAMEG00000003001	R3HDM4	97	55.462	Ailuropoda_melanoleuca
ENSLBEG00000000730	r3hdm4	100	87.891	ENSACIG00000004672	r3hdm4	100	87.891	Amphilophus_citrinellus
ENSLBEG00000000730	r3hdm4	98	87.698	ENSATEG00000015913	r3hdm4	99	87.698	Anabas_testudineus
ENSLBEG00000000730	r3hdm4	91	55.462	ENSANAG00000029748	R3HDM4	98	55.462	Aotus_nancymaae
ENSLBEG00000000730	r3hdm4	91	55.230	ENSBTAG00000046406	R3HDM4	88	55.230	Bos_taurus
ENSLBEG00000000730	r3hdm4	93	54.032	ENSCJAG00000020114	R3HDM4	92	54.032	Callithrix_jacchus
ENSLBEG00000000730	r3hdm4	91	56.303	ENSCAFG00000019665	R3HDM4	87	56.303	Canis_familiaris
ENSLBEG00000000730	r3hdm4	91	56.723	ENSCAFG00020016880	R3HDM4	87	56.723	Canis_lupus_dingo
ENSLBEG00000000730	r3hdm4	91	55.649	ENSCHIG00000020110	R3HDM4	91	55.649	Capra_hircus
ENSLBEG00000000730	r3hdm4	91	55.042	ENSCCAG00000019955	R3HDM4	86	55.042	Cebus_capucinus
ENSLBEG00000000730	r3hdm4	91	55.417	ENSCATG00000037269	R3HDM4	89	55.417	Cercocebus_atys
ENSLBEG00000000730	r3hdm4	91	54.852	ENSCLAG00000007094	R3HDM4	97	54.852	Chinchilla_lanigera
ENSLBEG00000000730	r3hdm4	91	56.303	ENSCSAG00000012574	R3HDM4	88	56.303	Chlorocebus_sabaeus
ENSLBEG00000000730	r3hdm4	100	60.526	ENSCPBG00000009805	R3HDM4	100	60.526	Chrysemys_picta_bellii
ENSLBEG00000000730	r3hdm4	91	55.882	ENSCANG00000040439	R3HDM4	83	55.882	Colobus_angolensis_palliatus
ENSLBEG00000000730	r3hdm4	91	54.852	ENSCGRG00001021650	R3hdm4	89	55.085	Cricetulus_griseus_chok1gshd
ENSLBEG00000000730	r3hdm4	91	54.852	ENSCGRG00000013169	R3hdm4	89	55.085	Cricetulus_griseus_crigri
ENSLBEG00000000730	r3hdm4	100	79.688	ENSCSEG00000018211	r3hdm4	100	79.688	Cynoglossus_semilaevis
ENSLBEG00000000730	r3hdm4	100	85.156	ENSCVAG00000017127	r3hdm4	100	85.156	Cyprinodon_variegatus
ENSLBEG00000000730	r3hdm4	90	55.042	ENSDORG00000006605	R3hdm4	96	55.042	Dipodomys_ordii
ENSLBEG00000000730	r3hdm4	91	55.462	ENSEASG00005021556	R3HDM4	86	55.462	Equus_asinus_asinus
ENSLBEG00000000730	r3hdm4	91	55.462	ENSECAG00000000003	R3HDM4	87	55.462	Equus_caballus
ENSLBEG00000000730	r3hdm4	91	55.882	ENSFCAG00000042437	R3HDM4	88	55.882	Felis_catus
ENSLBEG00000000730	r3hdm4	91	60.851	ENSFALG00000013938	R3HDM4	97	60.851	Ficedula_albicollis
ENSLBEG00000000730	r3hdm4	91	55.042	ENSFDAG00000017040	R3HDM4	97	55.042	Fukomys_damarensis
ENSLBEG00000000730	r3hdm4	100	84.766	ENSFHEG00000017636	r3hdm4	100	84.766	Fundulus_heteroclitus
ENSLBEG00000000730	r3hdm4	95	71.901	ENSGMOG00000001231	r3hdm4	100	71.901	Gadus_morhua
ENSLBEG00000000730	r3hdm4	91	60.338	ENSGALG00000001998	R3HDM4	90	60.338	Gallus_gallus
ENSLBEG00000000730	r3hdm4	100	84.766	ENSGAFG00000004173	r3hdm4	100	84.766	Gambusia_affinis
ENSLBEG00000000730	r3hdm4	100	60.150	ENSGAGG00000019698	R3HDM4	100	60.150	Gopherus_agassizii
ENSLBEG00000000730	r3hdm4	91	55.462	ENSGGOG00000008040	R3HDM4	97	55.462	Gorilla_gorilla
ENSLBEG00000000730	r3hdm4	100	88.281	ENSHBUG00000014810	r3hdm4	100	88.281	Haplochromis_burtoni
ENSLBEG00000000730	r3hdm4	91	53.782	ENSHGLG00000016194	R3HDM4	88	53.782	Heterocephalus_glaber_female
ENSLBEG00000000730	r3hdm4	99	82.353	ENSHCOG00000008422	r3hdm4	99	82.353	Hippocampus_comes
ENSLBEG00000000730	r3hdm4	100	70.543	ENSIPUG00000006716	r3hdm4	100	70.543	Ictalurus_punctatus
ENSLBEG00000000730	r3hdm4	91	53.361	ENSSTOG00000023015	R3HDM4	97	53.556	Ictidomys_tridecemlineatus
ENSLBEG00000000730	r3hdm4	90	55.319	ENSJJAG00000012475	R3hdm4	89	55.319	Jaculus_jaculus
ENSLBEG00000000730	r3hdm4	100	84.375	ENSKMAG00000005853	r3hdm4	100	84.375	Kryptolebias_marmoratus
ENSLBEG00000000730	r3hdm4	100	60.687	ENSLACG00000016445	R3HDM4	100	60.687	Latimeria_chalumnae
ENSLBEG00000000730	r3hdm4	100	69.084	ENSLOCG00000002423	r3hdm4	100	69.847	Lepisosteus_oculatus
ENSLBEG00000000730	r3hdm4	90	56.596	ENSLAFG00000017796	R3HDM4	90	56.596	Loxodonta_africana
ENSLBEG00000000730	r3hdm4	91	55.882	ENSMFAG00000044131	R3HDM4	88	55.882	Macaca_fascicularis
ENSLBEG00000000730	r3hdm4	86	56.696	ENSMMUG00000009682	R3HDM4	90	56.696	Macaca_mulatta
ENSLBEG00000000730	r3hdm4	91	55.882	ENSMNEG00000044115	R3HDM4	96	55.882	Macaca_nemestrina
ENSLBEG00000000730	r3hdm4	92	55.144	ENSMLEG00000035693	R3HDM4	89	55.144	Mandrillus_leucophaeus
ENSLBEG00000000730	r3hdm4	87	87.892	ENSMAMG00000005652	r3hdm4	91	87.892	Mastacembelus_armatus
ENSLBEG00000000730	r3hdm4	89	55.365	ENSMAUG00000010611	R3hdm4	90	55.365	Mesocricetus_auratus
ENSLBEG00000000730	r3hdm4	91	55.042	ENSMICG00000010124	R3HDM4	88	55.042	Microcebus_murinus
ENSLBEG00000000730	r3hdm4	91	54.043	ENSMOCG00000002646	R3hdm4	89	54.274	Microtus_ochrogaster
ENSLBEG00000000730	r3hdm4	100	85.156	ENSMMOG00000008253	r3hdm4	100	85.156	Mola_mola
ENSLBEG00000000730	r3hdm4	89	59.130	ENSMODG00000005698	R3HDM4	99	59.130	Monodelphis_domestica
ENSLBEG00000000730	r3hdm4	100	84.375	ENSMALG00000018856	r3hdm4	100	84.375	Monopterus_albus
ENSLBEG00000000730	r3hdm4	91	54.274	MGP_CAROLIEiJ_G0015551	R3hdm4	89	54.506	Mus_caroli
ENSLBEG00000000730	r3hdm4	90	53.879	ENSMUSG00000035781	R3hdm4	88	54.113	Mus_musculus
ENSLBEG00000000730	r3hdm4	91	53.846	MGP_PahariEiJ_G0030964	R3hdm4	89	54.077	Mus_pahari
ENSLBEG00000000730	r3hdm4	91	53.648	MGP_SPRETEiJ_G0016369	-	74	53.879	Mus_spretus
ENSLBEG00000000730	r3hdm4	93	56.198	ENSMPUG00000009394	R3HDM4	90	56.198	Mustela_putorius_furo
ENSLBEG00000000730	r3hdm4	100	87.500	ENSNBRG00000004438	r3hdm4	100	87.500	Neolamprologus_brichardi
ENSLBEG00000000730	r3hdm4	86	53.043	ENSNLEG00000001022	R3HDM4	99	53.043	Nomascus_leucogenys
ENSLBEG00000000730	r3hdm4	91	58.475	ENSMEUG00000011020	R3HDM4	99	58.475	Notamacropus_eugenii
ENSLBEG00000000730	r3hdm4	91	54.852	ENSODEG00000011745	R3HDM4	88	54.852	Octodon_degus
ENSLBEG00000000730	r3hdm4	100	88.281	ENSONIG00000012675	r3hdm4	92	88.281	Oreochromis_niloticus
ENSLBEG00000000730	r3hdm4	100	82.422	ENSOMEG00000003005	r3hdm4	100	82.422	Oryzias_melastigma
ENSLBEG00000000730	r3hdm4	90	55.745	ENSOGAG00000025656	R3HDM4	89	55.745	Otolemur_garnettii
ENSLBEG00000000730	r3hdm4	91	55.649	ENSOARG00000009945	R3HDM4	97	55.649	Ovis_aries
ENSLBEG00000000730	r3hdm4	91	55.462	ENSPPAG00000042371	R3HDM4	97	55.462	Pan_paniscus
ENSLBEG00000000730	r3hdm4	91	55.882	ENSPANG00000015203	R3HDM4	88	55.882	Papio_anubis
ENSLBEG00000000730	r3hdm4	100	66.794	ENSPKIG00000007421	r3hdm4	100	68.321	Paramormyrops_kingsleyae
ENSLBEG00000000730	r3hdm4	100	77.043	ENSPMGG00000020467	r3hdm4	100	77.043	Periophthalmus_magnuspinnatus
ENSLBEG00000000730	r3hdm4	90	55.556	ENSPEMG00000008365	Tmem259	96	55.365	Peromyscus_maniculatus_bairdii
ENSLBEG00000000730	r3hdm4	100	82.031	ENSPFOG00000003199	r3hdm4	100	82.031	Poecilia_formosa
ENSLBEG00000000730	r3hdm4	100	81.641	ENSPMEG00000014183	r3hdm4	100	81.641	Poecilia_mexicana
ENSLBEG00000000730	r3hdm4	100	82.812	ENSPREG00000010709	r3hdm4	100	82.812	Poecilia_reticulata
ENSLBEG00000000730	r3hdm4	91	55.508	ENSPPYG00000009297	R3HDM4	88	55.508	Pongo_abelii
ENSLBEG00000000730	r3hdm4	58	57.616	ENSPCAG00000010997	R3HDM4	55	57.616	Procavia_capensis
ENSLBEG00000000730	r3hdm4	91	56.303	ENSPCOG00000016785	R3HDM4	88	56.303	Propithecus_coquereli
ENSLBEG00000000730	r3hdm4	100	88.281	ENSPNYG00000017489	r3hdm4	100	88.281	Pundamilia_nyererei
ENSLBEG00000000730	r3hdm4	91	53.586	ENSRNOG00000011489	R3hdm4	89	53.846	Rattus_norvegicus
ENSLBEG00000000730	r3hdm4	91	55.882	ENSRROG00000028842	R3HDM4	88	55.882	Rhinopithecus_roxellana
ENSLBEG00000000730	r3hdm4	91	53.719	ENSSBOG00000019298	R3HDM4	70	54.132	Saimiri_boliviensis_boliviensis
ENSLBEG00000000730	r3hdm4	56	58.904	ENSSHAG00000003036	-	100	58.904	Sarcophilus_harrisii
ENSLBEG00000000730	r3hdm4	97	73.387	ENSSFOG00015020574	r3hdm4	91	73.494	Scleropages_formosus
ENSLBEG00000000730	r3hdm4	100	87.500	ENSSMAG00000021090	r3hdm4	74	87.500	Scophthalmus_maximus
ENSLBEG00000000730	r3hdm4	100	91.016	ENSSDUG00000008488	r3hdm4	100	91.016	Seriola_dumerili
ENSLBEG00000000730	r3hdm4	100	90.625	ENSSLDG00000025328	r3hdm4	100	90.625	Seriola_lalandi_dorsalis
ENSLBEG00000000730	r3hdm4	91	60.759	ENSSPUG00000005434	R3HDM4	92	60.759	Sphenodon_punctatus
ENSLBEG00000000730	r3hdm4	99	80.078	ENSSPAG00000002562	r3hdm4	99	80.078	Stegastes_partitus
ENSLBEG00000000730	r3hdm4	91	56.723	ENSSSCG00000013419	R3HDM4	87	56.723	Sus_scrofa
ENSLBEG00000000730	r3hdm4	78	56.796	ENSTGUG00000000663	R3HDM4	98	57.282	Taeniopygia_guttata
ENSLBEG00000000730	r3hdm4	91	55.508	ENSTTRG00000001470	R3HDM4	97	55.508	Tursiops_truncatus
ENSLBEG00000000730	r3hdm4	91	51.271	ENSUAMG00000005751	R3HDM4	100	56.250	Ursus_americanus
ENSLBEG00000000730	r3hdm4	91	56.303	ENSVVUG00000022685	R3HDM4	87	56.303	Vulpes_vulpes
ENSLBEG00000000730	r3hdm4	96	47.843	ENSXETG00000033624	R3HDM4	96	47.843	Xenopus_tropicalis
ENSLBEG00000000730	r3hdm4	100	82.490	ENSXCOG00000005127	r3hdm4	100	82.490	Xiphophorus_couchianus
ENSLBEG00000000730	r3hdm4	100	82.812	ENSXMAG00000022875	r3hdm4	100	82.812	Xiphophorus_maculatus