EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000000881 (Gene tree)
Gene ID: 110000907
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 14018 bases
Position: chrFKLU01000735.1:121424-135441
Accession: 110000907
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000001192	RRM_1	PF00076.22	4.6e-05	1	1
ENSLBEP00000001170	RRM_1	PF00076.22	5.5e-05	1	1
ENSLBEP00000001149	RRM_1	PF00076.22	5.5e-05	1	1
ENSLBEP00000001170	G-patch	PF01585.23	5.2e-13	1	1
ENSLBEP00000001192	G-patch	PF01585.23	5.3e-13	1	1
ENSLBEP00000001149	G-patch	PF01585.23	5.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000001280	-	1194	-	ENSLBEP00000001192	397 (aa)	-	-
ENSLBET00000001255	-	1912	XM_020656288	ENSLBEP00000001170	421 (aa)	XP_020511944	UPI0009B4BA4B
ENSLBET00000001233	-	2184	-	ENSLBEP00000001149	423 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000000881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000000881's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000000881	rbm17	100	78.774	ENSG00000134453	RBM17	100	82.064	Homo_sapiens
ENSLBEG00000000881	rbm17	99	94.005	ENSAPOG00000007101	rbm17	99	95.250	Acanthochromis_polyacanthus
ENSLBEG00000000881	rbm17	100	79.009	ENSAMEG00000002107	RBM17	100	82.310	Ailuropoda_melanoleuca
ENSLBEG00000000881	rbm17	100	88.152	ENSACIG00000006251	rbm17	100	91.852	Amphilophus_citrinellus
ENSLBEG00000000881	rbm17	100	93.824	ENSAOCG00000014892	rbm17	100	95.050	Amphiprion_ocellaris
ENSLBEG00000000881	rbm17	100	93.824	ENSAPEG00000022779	rbm17	100	95.050	Amphiprion_percula
ENSLBEG00000000881	rbm17	100	91.686	ENSATEG00000004406	rbm17	100	91.686	Anabas_testudineus
ENSLBEG00000000881	rbm17	100	79.009	ENSAPLG00000004190	RBM17	100	82.064	Anas_platyrhynchos
ENSLBEG00000000881	rbm17	90	76.350	ENSACAG00000005418	RBM17	99	78.457	Anolis_carolinensis
ENSLBEG00000000881	rbm17	100	68.384	ENSANAG00000019330	-	95	82.759	Aotus_nancymaae
ENSLBEG00000000881	rbm17	100	79.245	ENSANAG00000030127	RBM17	100	82.555	Aotus_nancymaae
ENSLBEG00000000881	rbm17	100	86.461	ENSACLG00000003928	rbm17	100	90.099	Astatotilapia_calliptera
ENSLBEG00000000881	rbm17	100	83.924	ENSAMXG00000005853	rbm17	100	84.161	Astyanax_mexicanus
ENSLBEG00000000881	rbm17	100	77.594	ENSBTAG00000011094	-	100	80.835	Bos_taurus
ENSLBEG00000000881	rbm17	100	78.774	ENSBTAG00000021951	RBM17	100	82.064	Bos_taurus
ENSLBEG00000000881	rbm17	97	30.542	WBGene00010233	F58B3.7	97	32.039	Caenorhabditis_elegans
ENSLBEG00000000881	rbm17	100	79.245	ENSCJAG00000020573	RBM17	100	82.555	Callithrix_jacchus
ENSLBEG00000000881	rbm17	100	79.009	ENSCAFG00000005206	RBM17	100	82.310	Canis_familiaris
ENSLBEG00000000881	rbm17	100	75.592	ENSCAFG00020005420	RBM17	100	80.247	Canis_lupus_dingo
ENSLBEG00000000881	rbm17	100	78.774	ENSCHIG00000023204	-	100	82.064	Capra_hircus
ENSLBEG00000000881	rbm17	100	76.651	ENSCHIG00000019921	-	100	79.853	Capra_hircus
ENSLBEG00000000881	rbm17	100	79.245	ENSTSYG00000001165	RBM17	99	85.593	Carlito_syrichta
ENSLBEG00000000881	rbm17	96	62.010	ENSCAPG00000006275	RBM17	100	68.564	Cavia_aperea
ENSLBEG00000000881	rbm17	100	75.943	ENSCPOG00000005679	RBM17	100	79.469	Cavia_porcellus
ENSLBEG00000000881	rbm17	100	79.245	ENSCCAG00000018655	RBM17	100	82.555	Cebus_capucinus
ENSLBEG00000000881	rbm17	100	78.774	ENSCATG00000041566	RBM17	100	82.064	Cercocebus_atys
ENSLBEG00000000881	rbm17	100	79.245	ENSCLAG00000012195	RBM17	99	81.463	Chinchilla_lanigera
ENSLBEG00000000881	rbm17	100	78.774	ENSCSAG00000013564	RBM17	100	82.064	Chlorocebus_sabaeus
ENSLBEG00000000881	rbm17	93	62.087	ENSCHOG00000005131	RBM17	100	64.894	Choloepus_hoffmanni
ENSLBEG00000000881	rbm17	100	78.824	ENSCPBG00000019836	RBM17	100	81.818	Chrysemys_picta_bellii
ENSLBEG00000000881	rbm17	100	44.794	ENSCSAVG00000008782	-	100	46.247	Ciona_savignyi
ENSLBEG00000000881	rbm17	100	78.538	ENSCANG00000030987	RBM17	100	81.818	Colobus_angolensis_palliatus
ENSLBEG00000000881	rbm17	97	70.732	ENSCANG00000023715	-	99	73.604	Colobus_angolensis_palliatus
ENSLBEG00000000881	rbm17	100	62.945	ENSCGRG00001009256	-	100	64.373	Cricetulus_griseus_chok1gshd
ENSLBEG00000000881	rbm17	100	79.481	ENSCGRG00001013842	Rbm17	100	81.707	Cricetulus_griseus_chok1gshd
ENSLBEG00000000881	rbm17	100	79.481	ENSCGRG00000006907	Rbm17	100	81.707	Cricetulus_griseus_crigri
ENSLBEG00000000881	rbm17	100	88.152	ENSCSEG00000018164	rbm17	100	88.152	Cynoglossus_semilaevis
ENSLBEG00000000881	rbm17	100	81.473	ENSCVAG00000002476	rbm17	100	85.891	Cyprinodon_variegatus
ENSLBEG00000000881	rbm17	100	77.176	ENSDARG00000031346	rbm17	100	80.000	Danio_rerio
ENSLBEG00000000881	rbm17	100	78.774	ENSDNOG00000035920	RBM17	100	82.064	Dasypus_novemcinctus
ENSLBEG00000000881	rbm17	99	37.029	FBgn0086683	Spf45	99	37.029	Drosophila_melanogaster
ENSLBEG00000000881	rbm17	82	82.243	ENSETEG00000006642	RBM17	87	82.243	Echinops_telfairi
ENSLBEG00000000881	rbm17	63	69.048	ENSEBUG00000010253	rbm17	84	69.048	Eptatretus_burgeri
ENSLBEG00000000881	rbm17	93	76.590	ENSEASG00005009236	-	100	80.053	Equus_asinus_asinus
ENSLBEG00000000881	rbm17	100	75.829	ENSEASG00005019205	-	100	78.973	Equus_asinus_asinus
ENSLBEG00000000881	rbm17	100	70.250	ENSECAG00000001379	-	100	72.973	Equus_caballus
ENSLBEG00000000881	rbm17	100	68.009	ENSECAG00000008939	RBM17	100	73.086	Equus_caballus
ENSLBEG00000000881	rbm17	85	66.667	ENSEEUG00000013077	RBM17	100	66.667	Erinaceus_europaeus
ENSLBEG00000000881	rbm17	100	85.581	ENSELUG00000006440	rbm17	100	85.581	Esox_lucius
ENSLBEG00000000881	rbm17	100	79.009	ENSFCAG00000031988	RBM17	100	82.310	Felis_catus
ENSLBEG00000000881	rbm17	100	77.830	ENSFALG00000001790	RBM17	100	81.081	Ficedula_albicollis
ENSLBEG00000000881	rbm17	100	79.245	ENSFDAG00000007470	RBM17	100	81.463	Fukomys_damarensis
ENSLBEG00000000881	rbm17	100	90.261	ENSFHEG00000001266	rbm17	100	88.785	Fundulus_heteroclitus
ENSLBEG00000000881	rbm17	99	82.381	ENSGMOG00000008438	rbm17	100	82.381	Gadus_morhua
ENSLBEG00000000881	rbm17	100	79.009	ENSGALG00000006332	RBM17	100	82.310	Gallus_gallus
ENSLBEG00000000881	rbm17	100	88.124	ENSGAFG00000019879	rbm17	100	91.832	Gambusia_affinis
ENSLBEG00000000881	rbm17	99	88.836	ENSGACG00000019174	rbm17	99	90.819	Gasterosteus_aculeatus
ENSLBEG00000000881	rbm17	100	78.538	ENSGAGG00000019906	RBM17	100	81.818	Gopherus_agassizii
ENSLBEG00000000881	rbm17	100	92.399	ENSHBUG00000016624	rbm17	100	93.812	Haplochromis_burtoni
ENSLBEG00000000881	rbm17	100	79.245	ENSHGLG00000011580	RBM17	100	81.463	Heterocephalus_glaber_female
ENSLBEG00000000881	rbm17	100	79.245	ENSHGLG00100010460	RBM17	100	81.463	Heterocephalus_glaber_male
ENSLBEG00000000881	rbm17	100	64.608	ENSHGLG00100010556	-	100	65.602	Heterocephalus_glaber_male
ENSLBEG00000000881	rbm17	99	87.828	ENSHCOG00000010865	rbm17	100	87.828	Hippocampus_comes
ENSLBEG00000000881	rbm17	100	82.353	ENSIPUG00000007699	Rbm17	100	82.353	Ictalurus_punctatus
ENSLBEG00000000881	rbm17	100	79.481	ENSSTOG00000013591	RBM17	100	81.707	Ictidomys_tridecemlineatus
ENSLBEG00000000881	rbm17	100	79.481	ENSJJAG00000022886	Rbm17	100	81.707	Jaculus_jaculus
ENSLBEG00000000881	rbm17	100	59.204	ENSJJAG00000000993	-	100	58.924	Jaculus_jaculus
ENSLBEG00000000881	rbm17	100	89.549	ENSKMAG00000021400	rbm17	100	89.549	Kryptolebias_marmoratus
ENSLBEG00000000881	rbm17	99	65.187	ENSLACG00000017297	RBM17	99	65.728	Latimeria_chalumnae
ENSLBEG00000000881	rbm17	100	81.265	ENSLOCG00000015659	rbm17	100	83.824	Lepisosteus_oculatus
ENSLBEG00000000881	rbm17	100	79.009	ENSLAFG00000011629	RBM17	100	81.068	Loxodonta_africana
ENSLBEG00000000881	rbm17	100	78.774	ENSMFAG00000035521	RBM17	100	82.064	Macaca_fascicularis
ENSLBEG00000000881	rbm17	100	78.774	ENSMMUG00000015152	RBM17	100	82.064	Macaca_mulatta
ENSLBEG00000000881	rbm17	100	78.774	ENSMNEG00000017264	RBM17	100	82.064	Macaca_nemestrina
ENSLBEG00000000881	rbm17	100	78.774	ENSMLEG00000029340	RBM17	100	82.064	Mandrillus_leucophaeus
ENSLBEG00000000881	rbm17	100	91.449	ENSMAMG00000000387	rbm17	100	91.449	Mastacembelus_armatus
ENSLBEG00000000881	rbm17	100	92.399	ENSMZEG00005015179	rbm17	100	92.399	Maylandia_zebra
ENSLBEG00000000881	rbm17	100	78.638	ENSMGAG00000003981	RBM17	100	81.114	Meleagris_gallopavo
ENSLBEG00000000881	rbm17	100	79.481	ENSMAUG00000019247	Rbm17	100	81.707	Mesocricetus_auratus
ENSLBEG00000000881	rbm17	100	73.364	ENSMICG00000041489	-	100	75.604	Microcebus_murinus
ENSLBEG00000000881	rbm17	100	79.245	ENSMICG00000003976	-	100	81.707	Microcebus_murinus
ENSLBEG00000000881	rbm17	100	79.481	ENSMOCG00000011847	Rbm17	100	81.707	Microtus_ochrogaster
ENSLBEG00000000881	rbm17	93	63.198	ENSMOCG00000014517	-	99	65.789	Microtus_ochrogaster
ENSLBEG00000000881	rbm17	100	86.318	ENSMMOG00000010264	rbm17	100	86.318	Mola_mola
ENSLBEG00000000881	rbm17	100	78.538	ENSMODG00000016648	RBM17	100	81.818	Monodelphis_domestica
ENSLBEG00000000881	rbm17	100	91.943	ENSMALG00000010597	rbm17	100	92.654	Monopterus_albus
ENSLBEG00000000881	rbm17	100	79.245	MGP_CAROLIEiJ_G0023173	Rbm17	100	81.707	Mus_caroli
ENSLBEG00000000881	rbm17	100	79.245	ENSMUSG00000037197	Rbm17	100	81.707	Mus_musculus
ENSLBEG00000000881	rbm17	100	79.717	MGP_PahariEiJ_G0019233	Rbm17	100	81.951	Mus_pahari
ENSLBEG00000000881	rbm17	100	79.245	MGP_SPRETEiJ_G0024091	Rbm17	100	81.707	Mus_spretus
ENSLBEG00000000881	rbm17	86	77.112	ENSMPUG00000016359	RBM17	96	80.857	Mustela_putorius_furo
ENSLBEG00000000881	rbm17	100	75.472	ENSMLUG00000025709	-	100	78.624	Myotis_lucifugus
ENSLBEG00000000881	rbm17	100	77.647	ENSMLUG00000002302	-	100	80.292	Myotis_lucifugus
ENSLBEG00000000881	rbm17	100	79.481	ENSNGAG00000000741	Rbm17	100	81.707	Nannospalax_galili
ENSLBEG00000000881	rbm17	100	56.000	ENSNGAG00000000663	-	100	54.523	Nannospalax_galili
ENSLBEG00000000881	rbm17	100	83.848	ENSNBRG00000018148	rbm17	100	87.376	Neolamprologus_brichardi
ENSLBEG00000000881	rbm17	100	78.774	ENSNLEG00000033350	RBM17	100	82.064	Nomascus_leucogenys
ENSLBEG00000000881	rbm17	100	73.585	ENSMEUG00000011347	RBM17	100	76.658	Notamacropus_eugenii
ENSLBEG00000000881	rbm17	100	68.868	ENSOPRG00000002993	RBM17	100	71.744	Ochotona_princeps
ENSLBEG00000000881	rbm17	97	61.314	ENSODEG00000007286	-	99	62.972	Octodon_degus
ENSLBEG00000000881	rbm17	100	79.059	ENSODEG00000004393	RBM17	100	81.265	Octodon_degus
ENSLBEG00000000881	rbm17	100	90.974	ENSONIG00000011838	rbm17	100	93.842	Oreochromis_niloticus
ENSLBEG00000000881	rbm17	100	78.066	ENSOANG00000015455	RBM17	100	81.618	Ornithorhynchus_anatinus
ENSLBEG00000000881	rbm17	100	90.499	ENSORLG00000028798	rbm17	100	90.499	Oryzias_latipes
ENSLBEG00000000881	rbm17	100	89.786	ENSORLG00020004593	rbm17	98	89.786	Oryzias_latipes_hni
ENSLBEG00000000881	rbm17	100	90.261	ENSORLG00015000033	rbm17	100	91.337	Oryzias_latipes_hsok
ENSLBEG00000000881	rbm17	100	90.024	ENSOMEG00000012060	rbm17	100	90.024	Oryzias_melastigma
ENSLBEG00000000881	rbm17	100	79.953	ENSOGAG00000015687	RBM17	100	82.439	Otolemur_garnettii
ENSLBEG00000000881	rbm17	100	78.774	ENSOARG00000012975	RBM17	100	82.064	Ovis_aries
ENSLBEG00000000881	rbm17	100	78.774	ENSPPAG00000032347	RBM17	100	82.064	Pan_paniscus
ENSLBEG00000000881	rbm17	100	79.009	ENSPPRG00000010706	RBM17	100	82.310	Panthera_pardus
ENSLBEG00000000881	rbm17	100	79.009	ENSPTIG00000007596	RBM17	100	82.310	Panthera_tigris_altaica
ENSLBEG00000000881	rbm17	100	78.774	ENSPTRG00000002265	RBM17	100	82.064	Pan_troglodytes
ENSLBEG00000000881	rbm17	100	78.774	ENSPANG00000023425	RBM17	100	82.064	Papio_anubis
ENSLBEG00000000881	rbm17	100	81.439	ENSPKIG00000025526	rbm17	100	81.250	Paramormyrops_kingsleyae
ENSLBEG00000000881	rbm17	100	78.704	ENSPKIG00000005048	-	100	79.310	Paramormyrops_kingsleyae
ENSLBEG00000000881	rbm17	100	77.518	ENSPSIG00000012332	RBM17	100	80.732	Pelodiscus_sinensis
ENSLBEG00000000881	rbm17	100	82.701	ENSPMGG00000007980	rbm17	100	86.173	Periophthalmus_magnuspinnatus
ENSLBEG00000000881	rbm17	100	79.481	ENSPEMG00000014320	Rbm17	100	81.707	Peromyscus_maniculatus_bairdii
ENSLBEG00000000881	rbm17	100	78.169	ENSPCIG00000019260	-	100	81.418	Phascolarctos_cinereus
ENSLBEG00000000881	rbm17	100	90.261	ENSPFOG00000013271	rbm17	100	90.261	Poecilia_formosa
ENSLBEG00000000881	rbm17	100	90.261	ENSPLAG00000004455	rbm17	100	90.261	Poecilia_latipinna
ENSLBEG00000000881	rbm17	100	90.261	ENSPMEG00000014864	rbm17	100	91.337	Poecilia_mexicana
ENSLBEG00000000881	rbm17	100	90.261	ENSPREG00000015589	rbm17	100	90.261	Poecilia_reticulata
ENSLBEG00000000881	rbm17	80	58.567	ENSPPYG00000019042	-	100	59.756	Pongo_abelii
ENSLBEG00000000881	rbm17	100	78.774	ENSPPYG00000002067	RBM17	100	82.064	Pongo_abelii
ENSLBEG00000000881	rbm17	99	59.352	ENSPPYG00000019881	-	100	61.728	Pongo_abelii
ENSLBEG00000000881	rbm17	100	71.934	ENSPCAG00000016879	RBM17	100	74.939	Procavia_capensis
ENSLBEG00000000881	rbm17	100	79.009	ENSPCOG00000027881	RBM17	100	82.310	Propithecus_coquereli
ENSLBEG00000000881	rbm17	100	71.226	ENSPVAG00000015499	RBM17	100	74.201	Pteropus_vampyrus
ENSLBEG00000000881	rbm17	100	78.385	ENSPNYG00000015274	rbm17	100	82.921	Pundamilia_nyererei
ENSLBEG00000000881	rbm17	100	84.397	ENSPNAG00000030046	rbm17	100	84.634	Pygocentrus_nattereri
ENSLBEG00000000881	rbm17	100	79.481	ENSRNOG00000018767	Rbm17	100	81.707	Rattus_norvegicus
ENSLBEG00000000881	rbm17	100	78.774	ENSRBIG00000043727	RBM17	100	82.064	Rhinopithecus_bieti
ENSLBEG00000000881	rbm17	100	78.774	ENSRROG00000044142	RBM17	100	82.064	Rhinopithecus_roxellana
ENSLBEG00000000881	rbm17	100	70.283	ENSSBOG00000023653	-	100	72.973	Saimiri_boliviensis_boliviensis
ENSLBEG00000000881	rbm17	100	79.009	ENSSBOG00000031661	-	100	82.310	Saimiri_boliviensis_boliviensis
ENSLBEG00000000881	rbm17	100	79.009	ENSSHAG00000012480	-	100	81.818	Sarcophilus_harrisii
ENSLBEG00000000881	rbm17	100	81.690	ENSSFOG00015009892	rbm17	100	84.108	Scleropages_formosus
ENSLBEG00000000881	rbm17	100	88.426	ENSSMAG00000012368	rbm17	100	88.426	Scophthalmus_maximus
ENSLBEG00000000881	rbm17	100	91.841	ENSSDUG00000015015	rbm17	100	92.233	Seriola_dumerili
ENSLBEG00000000881	rbm17	100	91.841	ENSSLDG00000014486	rbm17	100	92.233	Seriola_lalandi_dorsalis
ENSLBEG00000000881	rbm17	50	78.182	ENSSARG00000001792	-	79	87.805	Sorex_araneus
ENSLBEG00000000881	rbm17	99	78.960	ENSSPUG00000001036	RBM17	99	82.266	Sphenodon_punctatus
ENSLBEG00000000881	rbm17	100	93.824	ENSSPAG00000002338	rbm17	100	94.802	Stegastes_partitus
ENSLBEG00000000881	rbm17	100	78.538	ENSSSCG00000011134	RBM17	100	81.818	Sus_scrofa
ENSLBEG00000000881	rbm17	100	78.302	ENSTGUG00000002013	RBM17	100	80.732	Taeniopygia_guttata
ENSLBEG00000000881	rbm17	100	90.261	ENSTRUG00000010698	rbm17	100	92.079	Takifugu_rubripes
ENSLBEG00000000881	rbm17	100	89.549	ENSTNIG00000006892	rbm17	100	90.640	Tetraodon_nigroviridis
ENSLBEG00000000881	rbm17	81	93.939	ENSTBEG00000014686	RBM17	79	93.939	Tupaia_belangeri
ENSLBEG00000000881	rbm17	90	77.546	ENSTTRG00000001344	RBM17	100	81.148	Tursiops_truncatus
ENSLBEG00000000881	rbm17	100	75.829	ENSUAMG00000009499	RBM17	100	80.494	Ursus_americanus
ENSLBEG00000000881	rbm17	100	79.009	ENSUMAG00000012237	RBM17	100	82.310	Ursus_maritimus
ENSLBEG00000000881	rbm17	100	71.182	ENSVPAG00000005497	RBM17	100	71.182	Vicugna_pacos
ENSLBEG00000000881	rbm17	100	75.592	ENSVVUG00000006780	RBM17	100	80.247	Vulpes_vulpes
ENSLBEG00000000881	rbm17	99	74.822	ENSXETG00000018123	rbm17	100	77.970	Xenopus_tropicalis
ENSLBEG00000000881	rbm17	100	90.261	ENSXMAG00000008674	rbm17	100	91.337	Xiphophorus_maculatus