EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000001217 (Gene tree)
Gene ID: 109996822
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 4-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 8804 bases
Position: chrFKLU01000387.1:56781-65584
Accession: 109996822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000001536	RRM_5	PF13893.6	2.3e-10	1	2
ENSLBEP00000001536	RRM_5	PF13893.6	2.3e-10	2	2
ENSLBEP00000001550	RRM_5	PF13893.6	3e-10	1	2
ENSLBEP00000001550	RRM_5	PF13893.6	3e-10	2	2
ENSLBEP00000001536	RRM_1	PF00076.22	1.5e-32	1	2
ENSLBEP00000001536	RRM_1	PF00076.22	1.5e-32	2	2
ENSLBEP00000001550	RRM_1	PF00076.22	2e-32	1	2
ENSLBEP00000001550	RRM_1	PF00076.22	2e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000001660	-	1709	XM_020651123	ENSLBEP00000001550	537 (aa)	XP_020506779	UPI0009B3996B
ENSLBET00000001646	-	1676	-	ENSLBEP00000001536	484 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000001217's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000001217's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000001217	-	50	62.151	ENSLBEG00000027934	rbm14b	76	47.789

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000001217	-	99	88.139	ENSAPOG00000003380	-	99	87.956	Acanthochromis_polyacanthus
ENSLBEG00000001217	-	70	62.500	ENSAPOG00000021712	rbm14b	70	60.702	Acanthochromis_polyacanthus
ENSLBEG00000001217	-	99	86.314	ENSACIG00000021173	-	99	86.131	Amphilophus_citrinellus
ENSLBEG00000001217	-	70	62.500	ENSACIG00000000381	rbm14b	65	62.182	Amphilophus_citrinellus
ENSLBEG00000001217	-	100	88.603	ENSAOCG00000001659	-	100	88.603	Amphiprion_ocellaris
ENSLBEG00000001217	-	70	62.903	ENSAOCG00000008941	rbm14b	82	54.798	Amphiprion_ocellaris
ENSLBEG00000001217	-	70	62.903	ENSAPEG00000003161	rbm14b	82	56.201	Amphiprion_percula
ENSLBEG00000001217	-	99	88.725	ENSAPEG00000016988	-	99	88.725	Amphiprion_percula
ENSLBEG00000001217	-	95	85.029	ENSATEG00000009700	-	97	84.645	Anabas_testudineus
ENSLBEG00000001217	-	70	62.097	ENSATEG00000003034	rbm14b	78	57.179	Anabas_testudineus
ENSLBEG00000001217	-	70	62.500	ENSACLG00000014355	rbm14b	80	47.817	Astatotilapia_calliptera
ENSLBEG00000001217	-	100	86.232	ENSACLG00000009112	-	97	86.413	Astatotilapia_calliptera
ENSLBEG00000001217	-	69	60.643	ENSAMXG00000031225	rbm14b	86	47.863	Astyanax_mexicanus
ENSLBEG00000001217	-	70	61.461	ENSAMXG00000007233	rbm14a	82	61.461	Astyanax_mexicanus
ENSLBEG00000001217	-	100	81.752	ENSCSEG00000019690	-	100	82.117	Cynoglossus_semilaevis
ENSLBEG00000001217	-	70	63.415	ENSCSEG00000000357	rbm14b	81	52.620	Cynoglossus_semilaevis
ENSLBEG00000001217	-	100	82.162	ENSCVAG00000014858	-	100	81.982	Cyprinodon_variegatus
ENSLBEG00000001217	-	70	62.903	ENSCVAG00000013776	rbm14b	83	48.637	Cyprinodon_variegatus
ENSLBEG00000001217	-	67	63.291	ENSDARG00000103834	rbm14b	81	46.695	Danio_rerio
ENSLBEG00000001217	-	78	57.692	ENSDARG00000012723	rbm14a	80	60.363	Danio_rerio
ENSLBEG00000001217	-	68	66.245	ENSELUG00000004690	rbm14b	70	63.806	Esox_lucius
ENSLBEG00000001217	-	83	66.949	ENSELUG00000023633	rbm14a	94	54.070	Esox_lucius
ENSLBEG00000001217	-	95	80.189	ENSFHEG00000020913	-	99	82.075	Fundulus_heteroclitus
ENSLBEG00000001217	-	70	48.000	ENSFHEG00000021265	rbm14b	83	48.739	Fundulus_heteroclitus
ENSLBEG00000001217	-	69	81.383	ENSGMOG00000010840	-	78	81.383	Gadus_morhua
ENSLBEG00000001217	-	70	62.753	ENSGAFG00000001924	rbm14b	83	47.908	Gambusia_affinis
ENSLBEG00000001217	-	99	81.667	ENSGAFG00000004455	-	99	82.255	Gambusia_affinis
ENSLBEG00000001217	-	100	80.819	ENSGACG00000020440	-	100	81.564	Gasterosteus_aculeatus
ENSLBEG00000001217	-	70	62.500	ENSHBUG00000016754	rbm14b	84	61.660	Haplochromis_burtoni
ENSLBEG00000001217	-	100	86.232	ENSHBUG00000003665	-	97	86.413	Haplochromis_burtoni
ENSLBEG00000001217	-	95	75.758	ENSHCOG00000004071	-	99	76.894	Hippocampus_comes
ENSLBEG00000001217	-	78	49.763	ENSHCOG00000012571	rbm14b	98	65.823	Hippocampus_comes
ENSLBEG00000001217	-	70	56.068	ENSIPUG00000021256	rbm14a	83	55.961	Ictalurus_punctatus
ENSLBEG00000001217	-	66	61.728	ENSIPUG00000009089	rbm14b	86	47.660	Ictalurus_punctatus
ENSLBEG00000001217	-	99	76.731	ENSKMAG00000008514	-	99	81.165	Kryptolebias_marmoratus
ENSLBEG00000001217	-	100	84.601	ENSMAMG00000021313	-	100	84.783	Mastacembelus_armatus
ENSLBEG00000001217	-	70	61.694	ENSMAMG00000014394	rbm14b	78	46.751	Mastacembelus_armatus
ENSLBEG00000001217	-	70	62.500	ENSMZEG00005020834	rbm14b	82	47.817	Maylandia_zebra
ENSLBEG00000001217	-	100	86.232	ENSMZEG00005001201	-	100	86.413	Maylandia_zebra
ENSLBEG00000001217	-	100	85.130	ENSMMOG00000014501	-	99	85.502	Mola_mola
ENSLBEG00000001217	-	70	57.317	ENSMMOG00000012912	rbm14b	74	57.317	Mola_mola
ENSLBEG00000001217	-	83	46.187	ENSMALG00000015445	rbm14b	83	56.579	Monopterus_albus
ENSLBEG00000001217	-	99	86.131	ENSNBRG00000004960	-	99	86.131	Neolamprologus_brichardi
ENSLBEG00000001217	-	70	62.500	ENSNBRG00000003378	rbm14b	82	47.817	Neolamprologus_brichardi
ENSLBEG00000001217	-	65	58.065	ENSONIG00000013035	rbm14b	82	57.431	Oreochromis_niloticus
ENSLBEG00000001217	-	100	78.364	ENSONIG00000008557	-	100	78.727	Oreochromis_niloticus
ENSLBEG00000001217	-	100	84.771	ENSORLG00000001900	-	99	84.526	Oryzias_latipes
ENSLBEG00000001217	-	70	62.903	ENSORLG00000008051	rbm14b	82	48.847	Oryzias_latipes
ENSLBEG00000001217	-	100	84.771	ENSORLG00020019144	-	99	84.526	Oryzias_latipes_hni
ENSLBEG00000001217	-	70	62.903	ENSORLG00020005551	rbm14b	80	48.950	Oryzias_latipes_hni
ENSLBEG00000001217	-	70	62.500	ENSORLG00015022683	rbm14b	82	49.057	Oryzias_latipes_hsok
ENSLBEG00000001217	-	100	84.771	ENSORLG00015000082	-	100	84.771	Oryzias_latipes_hsok
ENSLBEG00000001217	-	70	63.158	ENSOMEG00000000910	rbm14b	78	55.319	Oryzias_melastigma
ENSLBEG00000001217	-	79	87.768	ENSOMEG00000006508	-	96	92.667	Oryzias_melastigma
ENSLBEG00000001217	-	71	63.713	ENSPKIG00000009078	rbm14b	71	63.713	Paramormyrops_kingsleyae
ENSLBEG00000001217	-	79	77.638	ENSPMGG00000018869	-	93	84.459	Periophthalmus_magnuspinnatus
ENSLBEG00000001217	-	70	62.753	ENSPMGG00000013064	rbm14b	70	59.727	Periophthalmus_magnuspinnatus
ENSLBEG00000001217	-	70	63.158	ENSPFOG00000003614	rbm14b	83	48.326	Poecilia_formosa
ENSLBEG00000001217	-	95	82.700	ENSPFOG00000004843	-	99	82.600	Poecilia_formosa
ENSLBEG00000001217	-	95	82.700	ENSPLAG00000017359	-	99	82.600	Poecilia_latipinna
ENSLBEG00000001217	-	70	62.753	ENSPLAG00000001395	rbm14b	83	47.490	Poecilia_latipinna
ENSLBEG00000001217	-	100	83.213	ENSPMEG00000004894	-	100	83.243	Poecilia_mexicana
ENSLBEG00000001217	-	70	63.158	ENSPMEG00000012911	rbm14b	83	48.117	Poecilia_mexicana
ENSLBEG00000001217	-	70	63.158	ENSPREG00000003013	rbm14b	83	48.008	Poecilia_reticulata
ENSLBEG00000001217	-	95	82.319	ENSPREG00000007274	-	99	82.218	Poecilia_reticulata
ENSLBEG00000001217	-	100	86.232	ENSPNYG00000015906	-	100	86.413	Pundamilia_nyererei
ENSLBEG00000001217	-	70	62.500	ENSPNYG00000023605	rbm14b	82	46.042	Pundamilia_nyererei
ENSLBEG00000001217	-	69	61.044	ENSPNAG00000001977	rbm14b	97	45.421	Pygocentrus_nattereri
ENSLBEG00000001217	-	70	57.908	ENSPNAG00000012473	rbm14a	84	58.151	Pygocentrus_nattereri
ENSLBEG00000001217	-	72	61.355	ENSSFOG00015023796	rbm14b	84	50.439	Scleropages_formosus
ENSLBEG00000001217	-	100	86.654	ENSSMAG00000002055	-	100	86.837	Scophthalmus_maximus
ENSLBEG00000001217	-	64	64.113	ENSSMAG00000004522	rbm14b	73	59.283	Scophthalmus_maximus
ENSLBEG00000001217	-	100	86.847	ENSSDUG00000020756	-	100	88.587	Seriola_dumerili
ENSLBEG00000001217	-	70	62.500	ENSSDUG00000007975	rbm14b	65	62.182	Seriola_dumerili
ENSLBEG00000001217	-	100	86.380	ENSSLDG00000006311	-	100	88.108	Seriola_lalandi_dorsalis
ENSLBEG00000001217	-	70	62.500	ENSSLDG00000006472	rbm14b	65	62.182	Seriola_lalandi_dorsalis
ENSLBEG00000001217	-	70	62.500	ENSSPAG00000004231	rbm14b	64	62.182	Stegastes_partitus
ENSLBEG00000001217	-	99	87.432	ENSSPAG00000010825	-	99	87.432	Stegastes_partitus
ENSLBEG00000001217	-	95	80.739	ENSTRUG00000009504	-	93	79.961	Takifugu_rubripes
ENSLBEG00000001217	-	70	62.151	ENSTRUG00000005716	rbm14b	66	62.182	Takifugu_rubripes
ENSLBEG00000001217	-	65	53.226	ENSTNIG00000006844	rbm14b	79	53.769	Tetraodon_nigroviridis
ENSLBEG00000001217	-	93	77.851	ENSTNIG00000000058	-	100	70.185	Tetraodon_nigroviridis
ENSLBEG00000001217	-	99	81.224	ENSXCOG00000006825	-	99	81.837	Xiphophorus_couchianus
ENSLBEG00000001217	-	70	62.753	ENSXMAG00000008390	rbm14b	83	48.117	Xiphophorus_maculatus
ENSLBEG00000001217	-	100	82.852	ENSXMAG00000000338	-	100	82.852	Xiphophorus_maculatus