EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000001258 (Gene tree)
Gene ID: 109977432
Gene Symbol: farsa
Alias: farsla|wu:fj21a11|zgc:136506|zgc:158185
Full Name: phenylalanine--tRNA ligase alpha subunit-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 5029 bases
Position: chrFKLU01005325.1:8023-13051
Accession: 109977432
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000001631	tRNA-synt_2d	PF01409.20	5.9e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000001742	-	1314	XM_020627155	ENSLBEP00000001631	437 (aa)	XP_020482811	-

Gene Model

Click here to download ENSLBEG00000001258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000001258's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000001258	farsa	97	99.529	ENSLBEG00000006757	-	86	99.529

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000001258	farsa	97	73.882	ENSG00000179115	FARSA	86	81.752	Homo_sapiens
ENSLBEG00000001258	farsa	97	91.765	ENSAPOG00000011465	farsa	86	91.765	Acanthochromis_polyacanthus
ENSLBEG00000001258	farsa	97	73.647	ENSAMEG00000012446	FARSA	84	73.647	Ailuropoda_melanoleuca
ENSLBEG00000001258	farsa	92	92.519	ENSACIG00000020499	farsa	85	92.519	Amphilophus_citrinellus
ENSLBEG00000001258	farsa	97	92.235	ENSAOCG00000000581	farsa	86	92.235	Amphiprion_ocellaris
ENSLBEG00000001258	farsa	97	92.000	ENSAPEG00000017695	farsa	86	92.000	Amphiprion_percula
ENSLBEG00000001258	farsa	92	84.328	ENSATEG00000012633	farsa	87	84.328	Anabas_testudineus
ENSLBEG00000001258	farsa	98	81.818	ENSATEG00000012807	farsa	85	81.818	Anabas_testudineus
ENSLBEG00000001258	farsa	96	75.708	ENSACAG00000017166	FARSA	71	75.708	Anolis_carolinensis
ENSLBEG00000001258	farsa	97	73.412	ENSANAG00000037420	FARSA	84	73.412	Aotus_nancymaae
ENSLBEG00000001258	farsa	97	92.706	ENSACLG00000001716	farsa	86	92.706	Astatotilapia_calliptera
ENSLBEG00000001258	farsa	97	84.941	ENSAMXG00000037912	farsa	86	84.941	Astyanax_mexicanus
ENSLBEG00000001258	farsa	97	73.176	ENSBTAG00000021374	FARSA	84	73.176	Bos_taurus
ENSLBEG00000001258	farsa	93	60.591	WBGene00001497	fars-1	81	60.591	Caenorhabditis_elegans
ENSLBEG00000001258	farsa	97	73.113	ENSCJAG00000004686	FARSA	83	68.471	Callithrix_jacchus
ENSLBEG00000001258	farsa	97	74.824	ENSCAFG00000017096	FARSA	84	74.824	Canis_familiaris
ENSLBEG00000001258	farsa	97	74.824	ENSCAFG00020005315	FARSA	84	74.824	Canis_lupus_dingo
ENSLBEG00000001258	farsa	97	68.706	ENSCHIG00000022617	FARSA	83	68.706	Capra_hircus
ENSLBEG00000001258	farsa	88	70.284	ENSTSYG00000002595	FARSA	70	70.284	Carlito_syrichta
ENSLBEG00000001258	farsa	86	73.936	ENSCAPG00000011353	FARSA	80	73.936	Cavia_aperea
ENSLBEG00000001258	farsa	97	73.176	ENSCPOG00000000787	FARSA	84	73.176	Cavia_porcellus
ENSLBEG00000001258	farsa	97	73.647	ENSCCAG00000028176	FARSA	84	73.647	Cebus_capucinus
ENSLBEG00000001258	farsa	97	72.471	ENSCLAG00000015489	FARSA	84	72.471	Chinchilla_lanigera
ENSLBEG00000001258	farsa	90	75.127	ENSCSAG00000006530	FARSA	83	75.127	Chlorocebus_sabaeus
ENSLBEG00000001258	farsa	93	80.296	ENSCPBG00000023915	FARSA	85	77.804	Chrysemys_picta_bellii
ENSLBEG00000001258	farsa	96	64.218	ENSCING00000002567	-	85	64.218	Ciona_intestinalis
ENSLBEG00000001258	farsa	97	64.319	ENSCSAVG00000010683	-	84	64.319	Ciona_savignyi
ENSLBEG00000001258	farsa	97	74.118	ENSCANG00000043649	-	84	74.118	Colobus_angolensis_palliatus
ENSLBEG00000001258	farsa	97	74.118	ENSCGRG00001019769	Farsa	84	74.118	Cricetulus_griseus_chok1gshd
ENSLBEG00000001258	farsa	97	74.118	ENSCGRG00000013415	Farsa	84	74.118	Cricetulus_griseus_crigri
ENSLBEG00000001258	farsa	97	88.941	ENSCSEG00000016214	farsa	82	88.941	Cynoglossus_semilaevis
ENSLBEG00000001258	farsa	97	88.941	ENSCVAG00000007907	farsa	86	88.941	Cyprinodon_variegatus
ENSLBEG00000001258	farsa	97	85.882	ENSDARG00000098825	farsa	86	85.882	Danio_rerio
ENSLBEG00000001258	farsa	92	74.505	ENSDNOG00000032350	FARSA	83	74.505	Dasypus_novemcinctus
ENSLBEG00000001258	farsa	97	72.706	ENSDORG00000010118	Farsa	84	72.706	Dipodomys_ordii
ENSLBEG00000001258	farsa	97	61.972	FBgn0030007	alpha-PheRS	85	61.972	Drosophila_melanogaster
ENSLBEG00000001258	farsa	97	65.330	ENSETEG00000018673	FARSA	84	65.330	Echinops_telfairi
ENSLBEG00000001258	farsa	68	66.554	ENSEBUG00000008545	farsa	99	66.554	Eptatretus_burgeri
ENSLBEG00000001258	farsa	97	68.514	ENSEASG00005004093	FARSA	81	68.514	Equus_asinus_asinus
ENSLBEG00000001258	farsa	84	88.889	ENSECAG00000015139	FARSA	63	88.889	Equus_caballus
ENSLBEG00000001258	farsa	97	88.000	ENSELUG00000010183	farsa	86	88.000	Esox_lucius
ENSLBEG00000001258	farsa	97	73.882	ENSFCAG00000023511	FARSA	84	73.882	Felis_catus
ENSLBEG00000001258	farsa	97	73.412	ENSFDAG00000005987	FARSA	84	73.412	Fukomys_damarensis
ENSLBEG00000001258	farsa	97	89.647	ENSFHEG00000009382	farsa	80	89.647	Fundulus_heteroclitus
ENSLBEG00000001258	farsa	97	84.742	ENSGMOG00000018319	farsa	86	84.742	Gadus_morhua
ENSLBEG00000001258	farsa	96	69.104	ENSGALG00000040258	FARSA	75	69.104	Gallus_gallus
ENSLBEG00000001258	farsa	97	90.118	ENSGAFG00000014146	farsa	86	90.118	Gambusia_affinis
ENSLBEG00000001258	farsa	97	90.376	ENSGACG00000006278	farsa	86	90.376	Gasterosteus_aculeatus
ENSLBEG00000001258	farsa	97	77.804	ENSGAGG00000000753	FARSA	85	77.804	Gopherus_agassizii
ENSLBEG00000001258	farsa	97	73.882	ENSGGOG00000003418	FARSA	84	73.882	Gorilla_gorilla
ENSLBEG00000001258	farsa	97	92.706	ENSHBUG00000019852	farsa	86	92.706	Haplochromis_burtoni
ENSLBEG00000001258	farsa	97	72.706	ENSHGLG00000005213	FARSA	84	72.706	Heterocephalus_glaber_female
ENSLBEG00000001258	farsa	97	72.941	ENSHGLG00100009586	FARSA	84	72.941	Heterocephalus_glaber_male
ENSLBEG00000001258	farsa	97	88.471	ENSHCOG00000019548	farsa	86	88.471	Hippocampus_comes
ENSLBEG00000001258	farsa	97	87.059	ENSIPUG00000007635	farsa	86	87.059	Ictalurus_punctatus
ENSLBEG00000001258	farsa	97	72.471	ENSSTOG00000008748	FARSA	84	72.471	Ictidomys_tridecemlineatus
ENSLBEG00000001258	farsa	98	88.551	ENSKMAG00000010698	farsa	86	88.551	Kryptolebias_marmoratus
ENSLBEG00000001258	farsa	97	82.118	ENSLOCG00000008389	farsa	88	82.118	Lepisosteus_oculatus
ENSLBEG00000001258	farsa	97	73.176	ENSLAFG00000016154	FARSA	84	73.176	Loxodonta_africana
ENSLBEG00000001258	farsa	97	73.882	ENSMFAG00000030595	FARSA	84	73.882	Macaca_fascicularis
ENSLBEG00000001258	farsa	97	73.882	ENSMMUG00000004390	FARSA	84	73.882	Macaca_mulatta
ENSLBEG00000001258	farsa	97	73.882	ENSMNEG00000043866	FARSA	84	73.882	Macaca_nemestrina
ENSLBEG00000001258	farsa	97	73.709	ENSMLEG00000029157	FARSA	84	73.709	Mandrillus_leucophaeus
ENSLBEG00000001258	farsa	97	88.941	ENSMAMG00000010636	farsa	86	88.941	Mastacembelus_armatus
ENSLBEG00000001258	farsa	97	92.706	ENSMZEG00005002319	farsa	86	92.706	Maylandia_zebra
ENSLBEG00000001258	farsa	97	74.118	ENSMAUG00000009188	Farsa	84	74.118	Mesocricetus_auratus
ENSLBEG00000001258	farsa	97	73.412	ENSMICG00000016272	FARSA	84	73.412	Microcebus_murinus
ENSLBEG00000001258	farsa	97	73.647	ENSMOCG00000011399	Farsa	84	73.647	Microtus_ochrogaster
ENSLBEG00000001258	farsa	97	85.142	ENSMMOG00000006287	farsa	85	85.142	Mola_mola
ENSLBEG00000001258	farsa	97	75.294	ENSMODG00000011519	FARSA	86	75.294	Monodelphis_domestica
ENSLBEG00000001258	farsa	97	84.706	ENSMALG00000001972	farsa	85	84.706	Monopterus_albus
ENSLBEG00000001258	farsa	97	73.647	MGP_CAROLIEiJ_G0031312	Farsa	84	73.647	Mus_caroli
ENSLBEG00000001258	farsa	97	73.647	ENSMUSG00000003808	Farsa	84	73.647	Mus_musculus
ENSLBEG00000001258	farsa	97	73.176	MGP_PahariEiJ_G0022917	Farsa	84	73.176	Mus_pahari
ENSLBEG00000001258	farsa	97	73.882	MGP_SPRETEiJ_G0032431	Farsa	84	73.882	Mus_spretus
ENSLBEG00000001258	farsa	97	74.824	ENSMPUG00000004400	FARSA	84	74.824	Mustela_putorius_furo
ENSLBEG00000001258	farsa	97	73.882	ENSMLUG00000012767	FARSA	84	73.882	Myotis_lucifugus
ENSLBEG00000001258	farsa	76	74.320	ENSNGAG00000018353	Farsa	90	74.320	Nannospalax_galili
ENSLBEG00000001258	farsa	97	92.235	ENSNBRG00000010063	farsa	86	92.235	Neolamprologus_brichardi
ENSLBEG00000001258	farsa	97	73.647	ENSNLEG00000012899	FARSA	84	73.647	Nomascus_leucogenys
ENSLBEG00000001258	farsa	97	76.235	ENSMEUG00000014253	FARSA	85	76.235	Notamacropus_eugenii
ENSLBEG00000001258	farsa	97	73.412	ENSOPRG00000005004	FARSA	84	73.412	Ochotona_princeps
ENSLBEG00000001258	farsa	97	73.412	ENSODEG00000010433	FARSA	84	73.412	Octodon_degus
ENSLBEG00000001258	farsa	97	92.706	ENSONIG00000008075	farsa	86	92.706	Oreochromis_niloticus
ENSLBEG00000001258	farsa	97	89.176	ENSORLG00000016406	farsa	77	89.176	Oryzias_latipes
ENSLBEG00000001258	farsa	97	89.412	ENSORLG00020021978	farsa	85	89.412	Oryzias_latipes_hni
ENSLBEG00000001258	farsa	97	88.941	ENSORLG00015015045	farsa	85	88.941	Oryzias_latipes_hsok
ENSLBEG00000001258	farsa	97	88.706	ENSOMEG00000017367	farsa	83	88.706	Oryzias_melastigma
ENSLBEG00000001258	farsa	97	73.412	ENSOGAG00000012243	FARSA	84	73.412	Otolemur_garnettii
ENSLBEG00000001258	farsa	97	73.412	ENSOARG00000009991	FARSA	78	73.412	Ovis_aries
ENSLBEG00000001258	farsa	97	73.647	ENSPPAG00000034266	FARSA	84	73.647	Pan_paniscus
ENSLBEG00000001258	farsa	97	73.882	ENSPPRG00000000346	FARSA	84	73.882	Panthera_pardus
ENSLBEG00000001258	farsa	88	75.969	ENSPTIG00000011502	FARSA	80	75.969	Panthera_tigris_altaica
ENSLBEG00000001258	farsa	97	73.647	ENSPTRG00000010550	FARSA	84	73.647	Pan_troglodytes
ENSLBEG00000001258	farsa	97	73.882	ENSPANG00000010978	FARSA	83	68.941	Papio_anubis
ENSLBEG00000001258	farsa	97	85.882	ENSPKIG00000007170	farsa	85	85.882	Paramormyrops_kingsleyae
ENSLBEG00000001258	farsa	86	73.600	ENSPSIG00000012701	FARSA	82	73.600	Pelodiscus_sinensis
ENSLBEG00000001258	farsa	92	88.806	ENSPMGG00000001401	farsa	85	88.806	Periophthalmus_magnuspinnatus
ENSLBEG00000001258	farsa	97	73.647	ENSPEMG00000012560	Farsa	84	73.647	Peromyscus_maniculatus_bairdii
ENSLBEG00000001258	farsa	97	75.059	ENSPMAG00000008453	farsa	85	75.059	Petromyzon_marinus
ENSLBEG00000001258	farsa	97	76.471	ENSPCIG00000019294	FARSA	86	76.471	Phascolarctos_cinereus
ENSLBEG00000001258	farsa	97	89.882	ENSPFOG00000001201	farsa	86	89.882	Poecilia_formosa
ENSLBEG00000001258	farsa	97	89.882	ENSPLAG00000018191	farsa	86	89.882	Poecilia_latipinna
ENSLBEG00000001258	farsa	97	90.118	ENSPMEG00000013547	farsa	86	90.118	Poecilia_mexicana
ENSLBEG00000001258	farsa	92	88.806	ENSPREG00000013620	farsa	85	88.806	Poecilia_reticulata
ENSLBEG00000001258	farsa	97	73.412	ENSPPYG00000009615	FARSA	84	73.412	Pongo_abelii
ENSLBEG00000001258	farsa	99	71.685	ENSPCAG00000015721	FARSA	88	71.685	Procavia_capensis
ENSLBEG00000001258	farsa	97	73.176	ENSPCOG00000014412	FARSA	84	73.176	Propithecus_coquereli
ENSLBEG00000001258	farsa	81	79.861	ENSPVAG00000014714	FARSA	70	79.861	Pteropus_vampyrus
ENSLBEG00000001258	farsa	97	92.706	ENSPNYG00000002144	farsa	86	92.706	Pundamilia_nyererei
ENSLBEG00000001258	farsa	97	85.882	ENSPNAG00000000869	farsa	86	85.882	Pygocentrus_nattereri
ENSLBEG00000001258	farsa	97	73.647	ENSRNOG00000003149	Farsa	84	73.647	Rattus_norvegicus
ENSLBEG00000001258	farsa	97	73.647	ENSRBIG00000025585	FARSA	84	73.647	Rhinopithecus_bieti
ENSLBEG00000001258	farsa	97	73.647	ENSRROG00000040046	FARSA	83	68.706	Rhinopithecus_roxellana
ENSLBEG00000001258	farsa	95	45.412	YFL022C	FRS2	83	45.412	Saccharomyces_cerevisiae
ENSLBEG00000001258	farsa	97	73.647	ENSSBOG00000031362	FARSA	84	73.647	Saimiri_boliviensis_boliviensis
ENSLBEG00000001258	farsa	86	76.596	ENSSHAG00000015006	FARSA	84	76.596	Sarcophilus_harrisii
ENSLBEG00000001258	farsa	97	82.588	ENSSFOG00015014864	farsa	86	82.588	Scleropages_formosus
ENSLBEG00000001258	farsa	97	90.824	ENSSMAG00000002358	farsa	86	90.824	Scophthalmus_maximus
ENSLBEG00000001258	farsa	97	91.765	ENSSDUG00000008631	farsa	86	91.765	Seriola_dumerili
ENSLBEG00000001258	farsa	97	91.294	ENSSLDG00000017108	farsa	86	91.294	Seriola_lalandi_dorsalis
ENSLBEG00000001258	farsa	69	67.000	ENSSARG00000006579	-	61	67.638	Sorex_araneus
ENSLBEG00000001258	farsa	93	67.980	ENSSPUG00000012509	FARSA	90	66.986	Sphenodon_punctatus
ENSLBEG00000001258	farsa	97	91.529	ENSSPAG00000018292	farsa	79	91.529	Stegastes_partitus
ENSLBEG00000001258	farsa	97	72.471	ENSSSCG00000013745	FARSA	84	72.471	Sus_scrofa
ENSLBEG00000001258	farsa	98	73.536	ENSTRUG00000010624	farsa	85	73.536	Takifugu_rubripes
ENSLBEG00000001258	farsa	97	79.953	ENSTNIG00000008330	farsa	85	79.953	Tetraodon_nigroviridis
ENSLBEG00000001258	farsa	86	69.681	ENSTBEG00000000396	FARSA	82	69.681	Tupaia_belangeri
ENSLBEG00000001258	farsa	91	71.106	ENSTTRG00000003599	FARSA	78	71.106	Tursiops_truncatus
ENSLBEG00000001258	farsa	97	73.882	ENSUAMG00000010230	FARSA	84	73.882	Ursus_americanus
ENSLBEG00000001258	farsa	97	73.882	ENSUMAG00000006110	FARSA	84	73.882	Ursus_maritimus
ENSLBEG00000001258	farsa	97	74.824	ENSVVUG00000024145	FARSA	84	74.824	Vulpes_vulpes
ENSLBEG00000001258	farsa	98	77.855	ENSXETG00000007936	farsa	99	78.404	Xenopus_tropicalis
ENSLBEG00000001258	farsa	98	79.206	ENSXCOG00000015512	farsa	86	79.206	Xiphophorus_couchianus
ENSLBEG00000001258	farsa	97	89.176	ENSXMAG00000008832	farsa	92	89.176	Xiphophorus_maculatus