EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000001304 (Gene tree)
Gene ID: 109999736
Gene Symbol: -
Alias: -
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 6429 bases
Position: chrFKLU01000594.1:24-6452
Accession: 109999736
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000001637	Nucleoplasmin	PF03066.15	7.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000001748	-	1280	XM_020654861	ENSLBEP00000001637	202 (aa)	XP_020510517	-

Gene Model

Click here to download ENSLBEG00000001304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000001304's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000001304	-	55	39.286	ENSLBEG00000015651	npm3	95	35.948

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000001304	-	50	93.000	ENSACIG00000019100	npm1b	63	89.720	Amphilophus_citrinellus
ENSLBEG00000001304	-	94	86.243	ENSAOCG00000012549	npm1b	64	86.243	Amphiprion_ocellaris
ENSLBEG00000001304	-	94	85.417	ENSATEG00000006254	npm1b	64	85.938	Anabas_testudineus
ENSLBEG00000001304	-	71	90.972	ENSACLG00000013812	npm1b	66	90.780	Astatotilapia_calliptera
ENSLBEG00000001304	-	62	44.961	ENSCPBG00000027172	-	68	42.969	Chrysemys_picta_bellii
ENSLBEG00000001304	-	82	73.964	ENSDARG00000037675	npm1b	51	71.006	Danio_rerio
ENSLBEG00000001304	-	74	81.333	ENSELUG00000022123	npm1b	71	78.992	Esox_lucius
ENSLBEG00000001304	-	94	86.316	ENSGACG00000016706	npm1b	67	85.864	Gasterosteus_aculeatus
ENSLBEG00000001304	-	70	90.780	ENSHBUG00000019903	npm1b	60	85.638	Haplochromis_burtoni
ENSLBEG00000001304	-	62	83.099	ENSMMOG00000003778	npm1b	92	83.212	Mola_mola
ENSLBEG00000001304	-	71	91.667	ENSNBRG00000014133	npm1b	77	91.489	Neolamprologus_brichardi
ENSLBEG00000001304	-	92	69.730	ENSOMEG00000003414	npm1b	50	76.429	Oryzias_melastigma
ENSLBEG00000001304	-	59	70.139	ENSPMGG00000008275	npm1b	93	72.059	Periophthalmus_magnuspinnatus
ENSLBEG00000001304	-	71	90.972	ENSPNYG00000001427	npm1b	66	90.780	Pundamilia_nyererei
ENSLBEG00000001304	-	94	87.958	ENSSDUG00000007726	npm1b	64	87.435	Seriola_dumerili
ENSLBEG00000001304	-	94	88.482	ENSSLDG00000021396	npm1b	64	87.958	Seriola_lalandi_dorsalis
ENSLBEG00000001304	-	68	50.704	ENSSPUG00000017271	-	68	51.852	Sphenodon_punctatus
ENSLBEG00000001304	-	68	43.662	ENSSPUG00000015604	-	66	44.444	Sphenodon_punctatus
ENSLBEG00000001304	-	94	87.368	ENSSPAG00000011152	npm1b	63	88.710	Stegastes_partitus