EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000001740 (Gene tree)
Gene ID: 109996290
Gene Symbol: ddx61
Alias: fk48d07|p54b|si:ch211-175g6.7|wu:fk48d07
Full Name: probable ATP-dependent RNA helicase ddx6
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 8429 bases
Position: chrFKLU01000358.1:253505-261933
Accession: 109996290
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000002273	DEAD	PF00270.29	2e-41	1	1
ENSLBEP00000002247	DEAD	PF00270.29	2.3e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000002378	-	5331	XM_020650345	ENSLBEP00000002247	483 (aa)	XP_020506001	UPI0009B410C9
ENSLBET00000002404	-	1341	-	ENSLBEP00000002273	446 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000001740's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000001740's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000001740	ddx61	82	30.789	ENSLBEG00000028087	DDX41	67	30.343
ENSLBEG00000001740	ddx61	97	76.091	ENSLBEG00000017823	ddx6	98	71.912
ENSLBEG00000001740	ddx61	78	38.068	ENSLBEG00000020356	eif4a3	94	38.068
ENSLBEG00000001740	ddx61	72	31.515	ENSLBEG00000027227	ddx18	50	31.515
ENSLBEG00000001740	ddx61	77	32.329	ENSLBEG00000021815	ddx55	61	32.329
ENSLBEG00000001740	ddx61	86	31.159	ENSLBEG00000016034	-	59	33.143
ENSLBEG00000001740	ddx61	72	31.515	ENSLBEG00000023115	DDX18	51	31.515
ENSLBEG00000001740	ddx61	86	31.281	ENSLBEG00000012311	-	68	31.281
ENSLBEG00000001740	ddx61	74	31.471	ENSLBEG00000022905	ddx5	64	30.130
ENSLBEG00000001740	ddx61	85	38.342	ENSLBEG00000018971	eif4a1b	95	38.342
ENSLBEG00000001740	ddx61	85	36.528	ENSLBEG00000025618	-	91	36.434
ENSLBEG00000001740	ddx61	79	32.051	ENSLBEG00000019475	ddx23	53	31.455
ENSLBEG00000001740	ddx61	86	31.702	ENSLBEG00000028348	ddx47	77	32.808
ENSLBEG00000001740	ddx61	82	32.353	ENSLBEG00000027804	ddx49	78	32.353
ENSLBEG00000001740	ddx61	85	35.492	ENSLBEG00000012254	ddx39b	90	35.065
ENSLBEG00000001740	ddx61	79	36.066	ENSLBEG00000013395	ddx19	79	36.066
ENSLBEG00000001740	ddx61	60	33.088	ENSLBEG00000017177	-	78	33.088
ENSLBEG00000001740	ddx61	83	39.785	ENSLBEG00000008635	eif4a2	91	39.737
ENSLBEG00000001740	ddx61	76	32.194	ENSLBEG00000010767	DDX5	55	32.194
ENSLBEG00000001740	ddx61	82	32.000	ENSLBEG00000026649	-	72	30.341
ENSLBEG00000001740	ddx61	98	86.902	ENSLBEG00000016890	-	97	86.902
ENSLBEG00000001740	ddx61	79	36.885	ENSLBEG00000000341	ddx19	80	36.885
ENSLBEG00000001740	ddx61	77	31.653	ENSLBEG00000007913	ddx43	50	31.653
ENSLBEG00000001740	ddx61	79	36.612	ENSLBEG00000011290	zgc:193690	76	36.605
ENSLBEG00000001740	ddx61	86	35.659	ENSLBEG00000002817	DDX39A	86	35.659

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000001740	ddx61	80	93.017	ENSAPOG00000023627	-	91	93.017	Acanthochromis_polyacanthus
ENSLBEG00000001740	ddx61	99	88.706	ENSAPOG00000014829	ddx61	99	88.706	Acanthochromis_polyacanthus
ENSLBEG00000001740	ddx61	98	81.184	ENSACIG00000018355	-	97	81.184	Amphilophus_citrinellus
ENSLBEG00000001740	ddx61	98	87.342	ENSAOCG00000006269	-	97	87.342	Amphiprion_ocellaris
ENSLBEG00000001740	ddx61	99	89.528	ENSAOCG00000007627	ddx61	99	89.528	Amphiprion_ocellaris
ENSLBEG00000001740	ddx61	98	87.342	ENSAPEG00000020642	-	97	87.342	Amphiprion_percula
ENSLBEG00000001740	ddx61	99	89.528	ENSAPEG00000007293	ddx61	99	89.528	Amphiprion_percula
ENSLBEG00000001740	ddx61	98	87.342	ENSAPEG00000021368	-	97	87.342	Amphiprion_percula
ENSLBEG00000001740	ddx61	99	90.456	ENSATEG00000011302	ddx61	99	90.456	Anabas_testudineus
ENSLBEG00000001740	ddx61	98	87.421	ENSATEG00000005424	-	97	87.421	Anabas_testudineus
ENSLBEG00000001740	ddx61	98	91.755	ENSACLG00000027620	ddx61	99	91.755	Astatotilapia_calliptera
ENSLBEG00000001740	ddx61	98	88.397	ENSACLG00000003260	-	97	88.397	Astatotilapia_calliptera
ENSLBEG00000001740	ddx61	99	84.583	ENSAMXG00000033980	-	97	84.583	Astyanax_mexicanus
ENSLBEG00000001740	ddx61	98	85.294	ENSAMXG00000032542	ddx61	97	85.146	Astyanax_mexicanus
ENSLBEG00000001740	ddx61	98	87.866	ENSCSEG00000009893	-	97	87.866	Cynoglossus_semilaevis
ENSLBEG00000001740	ddx61	98	86.737	ENSCVAG00000011006	-	97	86.737	Cyprinodon_variegatus
ENSLBEG00000001740	ddx61	98	85.654	ENSDARG00000018425	ddx61	98	85.654	Danio_rerio
ENSLBEG00000001740	ddx61	99	90.126	ENSELUG00000020545	ddx61	98	90.126	Esox_lucius
ENSLBEG00000001740	ddx61	98	86.722	ENSELUG00000022538	-	97	86.722	Esox_lucius
ENSLBEG00000001740	ddx61	98	87.131	ENSFHEG00000015487	-	96	87.131	Fundulus_heteroclitus
ENSLBEG00000001740	ddx61	67	83.082	ENSGMOG00000003561	-	100	83.082	Gadus_morhua
ENSLBEG00000001740	ddx61	98	88.679	ENSGMOG00000013762	ddx61	100	88.017	Gadus_morhua
ENSLBEG00000001740	ddx61	99	86.279	ENSGAFG00000015865	-	98	86.279	Gambusia_affinis
ENSLBEG00000001740	ddx61	98	90.123	ENSGACG00000003401	ddx61	99	90.123	Gasterosteus_aculeatus
ENSLBEG00000001740	ddx61	98	86.737	ENSGACG00000002413	-	98	86.737	Gasterosteus_aculeatus
ENSLBEG00000001740	ddx61	98	88.397	ENSHBUG00000017033	-	97	88.397	Haplochromis_burtoni
ENSLBEG00000001740	ddx61	98	91.966	ENSHBUG00000017832	ddx61	99	91.966	Haplochromis_burtoni
ENSLBEG00000001740	ddx61	98	88.161	ENSHCOG00000008184	ddx61	97	88.161	Hippocampus_comes
ENSLBEG00000001740	ddx61	98	85.924	ENSHCOG00000012238	-	97	85.924	Hippocampus_comes
ENSLBEG00000001740	ddx61	99	82.449	ENSIPUG00000008367	-	99	82.449	Ictalurus_punctatus
ENSLBEG00000001740	ddx61	97	83.617	ENSIPUG00000012823	DDX6	99	82.463	Ictalurus_punctatus
ENSLBEG00000001740	ddx61	97	87.234	ENSKMAG00000007213	-	96	87.234	Kryptolebias_marmoratus
ENSLBEG00000001740	ddx61	98	82.292	ENSLACG00000015214	ddx61	99	82.292	Latimeria_chalumnae
ENSLBEG00000001740	ddx61	76	78.125	ENSLOCG00000004352	ddx61	88	78.125	Lepisosteus_oculatus
ENSLBEG00000001740	ddx61	98	90.717	ENSMAMG00000005321	ddx61	97	90.717	Mastacembelus_armatus
ENSLBEG00000001740	ddx61	98	88.000	ENSMAMG00000005559	-	97	88.000	Mastacembelus_armatus
ENSLBEG00000001740	ddx61	98	91.966	ENSMZEG00005003556	ddx61	99	91.966	Maylandia_zebra
ENSLBEG00000001740	ddx61	98	88.397	ENSMZEG00005026268	-	97	88.397	Maylandia_zebra
ENSLBEG00000001740	ddx61	98	77.848	ENSMMOG00000013694	-	96	77.848	Mola_mola
ENSLBEG00000001740	ddx61	79	74.788	ENSMMOG00000008825	-	92	74.788	Mola_mola
ENSLBEG00000001740	ddx61	98	90.870	ENSMMOG00000007415	ddx61	97	90.870	Mola_mola
ENSLBEG00000001740	ddx61	98	87.131	ENSMALG00000013817	-	97	87.131	Monopterus_albus
ENSLBEG00000001740	ddx61	99	77.413	ENSMALG00000013776	ddx61	98	77.413	Monopterus_albus
ENSLBEG00000001740	ddx61	99	85.084	ENSNBRG00000015800	ddx61	99	85.084	Neolamprologus_brichardi
ENSLBEG00000001740	ddx61	98	81.435	ENSNBRG00000015075	-	97	81.435	Neolamprologus_brichardi
ENSLBEG00000001740	ddx61	98	88.608	ENSONIG00000013748	-	97	88.608	Oreochromis_niloticus
ENSLBEG00000001740	ddx61	99	91.597	ENSONIG00000011418	ddx61	99	91.597	Oreochromis_niloticus
ENSLBEG00000001740	ddx61	99	85.565	ENSORLG00000009178	-	98	85.565	Oryzias_latipes
ENSLBEG00000001740	ddx61	99	85.565	ENSORLG00020015515	-	98	85.565	Oryzias_latipes_hni
ENSLBEG00000001740	ddx61	99	85.565	ENSORLG00015006764	-	98	85.565	Oryzias_latipes_hsok
ENSLBEG00000001740	ddx61	98	77.215	ENSOMEG00000022326	-	99	77.215	Oryzias_melastigma
ENSLBEG00000001740	ddx61	98	87.631	ENSPKIG00000024264	ddx61	98	87.164	Paramormyrops_kingsleyae
ENSLBEG00000001740	ddx61	99	79.626	ENSPMGG00000013355	-	98	79.626	Periophthalmus_magnuspinnatus
ENSLBEG00000001740	ddx61	97	88.085	ENSPFOG00000005750	-	96	88.085	Poecilia_formosa
ENSLBEG00000001740	ddx61	97	88.085	ENSPLAG00000000403	-	96	88.085	Poecilia_latipinna
ENSLBEG00000001740	ddx61	99	87.083	ENSPMEG00000023737	-	98	87.083	Poecilia_mexicana
ENSLBEG00000001740	ddx61	98	88.397	ENSPNYG00000003986	-	97	88.397	Pundamilia_nyererei
ENSLBEG00000001740	ddx61	98	85.294	ENSPNYG00000015045	ddx61	99	85.294	Pundamilia_nyererei
ENSLBEG00000001740	ddx61	99	85.477	ENSPNAG00000008742	-	98	85.477	Pygocentrus_nattereri
ENSLBEG00000001740	ddx61	98	84.937	ENSPNAG00000024072	ddx61	99	84.937	Pygocentrus_nattereri
ENSLBEG00000001740	ddx61	97	86.458	ENSSFOG00015021404	ddx61	98	86.094	Scleropages_formosus
ENSLBEG00000001740	ddx61	98	87.526	ENSSMAG00000001793	-	97	87.526	Scophthalmus_maximus
ENSLBEG00000001740	ddx61	99	87.885	ENSSMAG00000006591	ddx61	99	88.296	Scophthalmus_maximus
ENSLBEG00000001740	ddx61	98	88.421	ENSSDUG00000007530	-	97	88.421	Seriola_dumerili
ENSLBEG00000001740	ddx61	99	90.535	ENSSDUG00000009713	ddx61	99	90.741	Seriola_dumerili
ENSLBEG00000001740	ddx61	98	88.421	ENSSLDG00000007608	-	97	88.421	Seriola_lalandi_dorsalis
ENSLBEG00000001740	ddx61	99	90.947	ENSSLDG00000000132	ddx61	99	91.152	Seriola_lalandi_dorsalis
ENSLBEG00000001740	ddx61	98	87.553	ENSSPAG00000013878	-	97	87.553	Stegastes_partitus
ENSLBEG00000001740	ddx61	99	88.296	ENSSPAG00000001578	ddx61	99	89.322	Stegastes_partitus
ENSLBEG00000001740	ddx61	98	85.895	ENSTRUG00000012432	-	97	85.895	Takifugu_rubripes
ENSLBEG00000001740	ddx61	98	85.924	ENSTNIG00000003560	-	99	85.924	Tetraodon_nigroviridis
ENSLBEG00000001740	ddx61	99	76.715	ENSXCOG00000001406	-	97	76.715	Xiphophorus_couchianus
ENSLBEG00000001740	ddx61	99	86.694	ENSXMAG00000016090	-	98	86.694	Xiphophorus_maculatus