EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000001801 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 5633 bases
Position: chrFKLU01004508.1:9798-15430
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000002292	MTS	PF05175.14	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000002424	-	759	-	ENSLBEP00000002292	252 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000001801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000001801's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000001801	-	92	98.276	ENSLBEG00000017783	-	94	98.276
ENSLBEG00000001801	-	100	99.603	ENSLBEG00000016433	-	100	99.603
ENSLBEG00000001801	-	92	97.845	ENSLBEG00000013441	-	94	97.845
ENSLBEG00000001801	-	100	100.000	ENSLBEG00000014146	-	100	100.000
ENSLBEG00000001801	-	90	99.559	ENSLBEG00000014625	-	97	99.559
ENSLBEG00000001801	-	92	98.276	ENSLBEG00000012470	-	94	98.276
ENSLBEG00000001801	-	100	99.603	ENSLBEG00000001512	-	100	99.603
ENSLBEG00000001801	-	100	99.603	ENSLBEG00000000800	-	100	99.603
ENSLBEG00000001801	-	82	90.821	ENSLBEG00000017725	-	93	90.821
ENSLBEG00000001801	-	99	99.600	ENSLBEG00000001064	-	99	99.600
ENSLBEG00000001801	-	92	97.414	ENSLBEG00000008443	-	94	97.414
ENSLBEG00000001801	-	92	89.224	ENSLBEG00000007244	-	94	89.224
ENSLBEG00000001801	-	92	97.845	ENSLBEG00000013950	-	94	97.845
ENSLBEG00000001801	-	85	79.812	ENSLBEG00000001951	-	100	79.812
ENSLBEG00000001801	-	100	99.603	ENSLBEG00000009443	-	100	99.603
ENSLBEG00000001801	-	100	94.048	ENSLBEG00000016027	-	100	94.048
ENSLBEG00000001801	-	92	98.276	ENSLBEG00000018635	-	94	98.276
ENSLBEG00000001801	-	99	98.394	ENSLBEG00000022906	-	99	98.394
ENSLBEG00000001801	-	99	94.000	ENSLBEG00000020075	-	99	94.000
ENSLBEG00000001801	-	92	97.845	ENSLBEG00000012312	-	94	97.845
ENSLBEG00000001801	-	100	99.603	ENSLBEG00000025973	-	100	99.603

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000001801	-	97	73.577	ENSAPOG00000006572	etfbkmt	96	73.577	Acanthochromis_polyacanthus
ENSLBEG00000001801	-	86	80.645	ENSACIG00000008581	etfbkmt	84	80.645	Amphilophus_citrinellus
ENSLBEG00000001801	-	100	71.260	ENSAOCG00000022300	etfbkmt	100	71.260	Amphiprion_ocellaris
ENSLBEG00000001801	-	100	71.654	ENSAPEG00000011574	etfbkmt	100	71.654	Amphiprion_percula
ENSLBEG00000001801	-	97	69.323	ENSATEG00000018503	etfbkmt	93	69.323	Anabas_testudineus
ENSLBEG00000001801	-	85	58.605	ENSAPLG00000006601	-	84	58.605	Anas_platyrhynchos
ENSLBEG00000001801	-	98	47.692	ENSACAG00000012796	-	98	47.692	Anolis_carolinensis
ENSLBEG00000001801	-	98	71.200	ENSACLG00000004215	etfbkmt	97	71.200	Astatotilapia_calliptera
ENSLBEG00000001801	-	89	66.814	ENSAMXG00000001009	etfbkmt	91	66.814	Astyanax_mexicanus
ENSLBEG00000001801	-	80	37.387	WBGene00016492	C37A2.6	91	37.387	Caenorhabditis_elegans
ENSLBEG00000001801	-	85	57.674	ENSTSYG00000008171	-	84	57.674	Carlito_syrichta
ENSLBEG00000001801	-	86	75.576	ENSCSEG00000015641	etfbkmt	86	75.576	Cynoglossus_semilaevis
ENSLBEG00000001801	-	98	61.753	ENSDARG00000079080	etfbkmt	97	61.753	Danio_rerio
ENSLBEG00000001801	-	85	56.279	ENSDORG00000004958	-	82	56.279	Dipodomys_ordii
ENSLBEG00000001801	-	88	55.157	ENSETEG00000012226	-	84	55.157	Echinops_telfairi
ENSLBEG00000001801	-	99	61.265	ENSELUG00000007086	etfbkmt	98	61.265	Esox_lucius
ENSLBEG00000001801	-	85	59.070	ENSFALG00000009031	-	79	59.070	Ficedula_albicollis
ENSLBEG00000001801	-	85	57.209	ENSFDAG00000017836	-	84	57.209	Fukomys_damarensis
ENSLBEG00000001801	-	97	68.293	ENSFHEG00000008522	etfbkmt	96	68.293	Fundulus_heteroclitus
ENSLBEG00000001801	-	85	58.605	ENSGALG00000027056	-	82	58.605	Gallus_gallus
ENSLBEG00000001801	-	92	67.234	ENSGAFG00000021856	etfbkmt	88	67.234	Gambusia_affinis
ENSLBEG00000001801	-	85	79.907	ENSGACG00000013489	etfbkmt	96	79.907	Gasterosteus_aculeatus
ENSLBEG00000001801	-	98	71.600	ENSHBUG00000018381	etfbkmt	97	71.600	Haplochromis_burtoni
ENSLBEG00000001801	-	84	68.720	ENSHCOG00000008050	etfbkmt	93	65.686	Hippocampus_comes
ENSLBEG00000001801	-	99	59.843	ENSIPUG00000017830	etfbkmt	99	59.843	Ictalurus_punctatus
ENSLBEG00000001801	-	88	73.661	ENSKMAG00000000165	etfbkmt	86	73.661	Kryptolebias_marmoratus
ENSLBEG00000001801	-	98	71.600	ENSMZEG00005017239	etfbkmt	97	71.600	Maylandia_zebra
ENSLBEG00000001801	-	85	57.674	ENSMOCG00000016859	-	84	57.674	Microtus_ochrogaster
ENSLBEG00000001801	-	98	69.721	ENSMMOG00000018884	etfbkmt	99	69.721	Mola_mola
ENSLBEG00000001801	-	89	74.107	ENSMALG00000013093	etfbkmt	84	74.107	Monopterus_albus
ENSLBEG00000001801	-	85	57.674	ENSOPRG00000010545	-	85	57.674	Ochotona_princeps
ENSLBEG00000001801	-	98	71.146	ENSONIG00000010461	etfbkmt	97	71.146	Oreochromis_niloticus
ENSLBEG00000001801	-	91	60.262	ENSPKIG00000017714	etfbkmt	87	60.262	Paramormyrops_kingsleyae
ENSLBEG00000001801	-	99	62.651	ENSPMGG00000000508	etfbkmt	98	62.651	Periophthalmus_magnuspinnatus
ENSLBEG00000001801	-	91	69.492	ENSPFOG00000011646	etfbkmt	89	69.492	Poecilia_formosa
ENSLBEG00000001801	-	91	69.492	ENSPLAG00000002776	etfbkmt	89	69.492	Poecilia_latipinna
ENSLBEG00000001801	-	91	69.915	ENSPMEG00000012994	etfbkmt	89	69.915	Poecilia_mexicana
ENSLBEG00000001801	-	91	69.068	ENSPREG00000020975	etfbkmt	89	69.068	Poecilia_reticulata
ENSLBEG00000001801	-	98	71.200	ENSPNYG00000021482	etfbkmt	97	71.200	Pundamilia_nyererei
ENSLBEG00000001801	-	92	62.140	ENSPNAG00000004699	etfbkmt	97	62.140	Pygocentrus_nattereri
ENSLBEG00000001801	-	86	62.673	ENSSFOG00015022618	etfbkmt	86	62.673	Scleropages_formosus
ENSLBEG00000001801	-	92	74.167	ENSSMAG00000010063	etfbkmt	100	74.167	Scophthalmus_maximus
ENSLBEG00000001801	-	97	73.307	ENSSDUG00000020335	etfbkmt	96	73.307	Seriola_dumerili
ENSLBEG00000001801	-	97	72.908	ENSSLDG00000010743	etfbkmt	96	72.908	Seriola_lalandi_dorsalis
ENSLBEG00000001801	-	86	79.724	ENSSPAG00000006943	etfbkmt	88	79.724	Stegastes_partitus
ENSLBEG00000001801	-	85	59.070	ENSTGUG00000011478	-	98	59.070	Taeniopygia_guttata
ENSLBEG00000001801	-	86	71.889	ENSTRUG00000001435	etfbkmt	86	71.889	Takifugu_rubripes
ENSLBEG00000001801	-	85	70.233	ENSTNIG00000008357	etfbkmt	98	70.233	Tetraodon_nigroviridis
ENSLBEG00000001801	-	89	70.130	ENSXCOG00000011704	etfbkmt	98	70.130	Xiphophorus_couchianus
ENSLBEG00000001801	-	89	69.697	ENSXMAG00000013003	etfbkmt	87	69.697	Xiphophorus_maculatus