EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000002280 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: steroid receptor RNA activator 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 7098 bases
Position: chrFKLU01000057.1:497289-504386
Accession: 109983535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000002964	SRA1	PF07304.11	1.3e-66	1	1
ENSLBEP00000002946	SRA1	PF07304.11	9.2e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000003126	-	705	XM_020633278	ENSLBEP00000002964	234 (aa)	XP_020488934	-
ENSLBET00000003108	-	750	XM_020633279	ENSLBEP00000002946	249 (aa)	XP_020488935	-

Gene Model

Click here to download ENSLBEG00000002280's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000002280's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000002280	-	88	51.456	ENSG00000213523	SRA1	83	51.905	Homo_sapiens
ENSLBEG00000002280	-	89	50.711	ENSAMEG00000011005	SRA1	84	50.943	Ailuropoda_melanoleuca
ENSLBEG00000002280	-	92	74.661	ENSACIG00000017574	-	90	73.059	Amphilophus_citrinellus
ENSLBEG00000002280	-	92	76.037	ENSAOCG00000019366	-	90	76.037	Amphiprion_ocellaris
ENSLBEG00000002280	-	92	76.037	ENSAPEG00000004211	-	90	76.037	Amphiprion_percula
ENSLBEG00000002280	-	95	66.368	ENSATEG00000013578	-	98	68.444	Anabas_testudineus
ENSLBEG00000002280	-	94	45.575	ENSACAG00000013148	SRA1	91	47.059	Anolis_carolinensis
ENSLBEG00000002280	-	88	50.971	ENSANAG00000020391	SRA1	83	51.429	Aotus_nancymaae
ENSLBEG00000002280	-	96	71.304	ENSACLG00000002061	-	87	68.033	Astatotilapia_calliptera
ENSLBEG00000002280	-	92	51.835	ENSAMXG00000032750	sra1	90	50.218	Astyanax_mexicanus
ENSLBEG00000002280	-	87	50.485	ENSBTAG00000001449	SRA1	88	49.763	Bos_taurus
ENSLBEG00000002280	-	87	48.804	ENSCJAG00000016613	SRA1	83	49.065	Callithrix_jacchus
ENSLBEG00000002280	-	88	49.524	ENSCAFG00000005819	SRA1	84	50.000	Canis_familiaris
ENSLBEG00000002280	-	88	49.524	ENSCAFG00020001924	SRA1	84	50.000	Canis_lupus_dingo
ENSLBEG00000002280	-	84	50.761	ENSCHIG00000013652	SRA1	73	49.754	Capra_hircus
ENSLBEG00000002280	-	87	50.244	ENSTSYG00000032938	SRA1	84	49.048	Carlito_syrichta
ENSLBEG00000002280	-	88	49.029	ENSCPOG00000020210	SRA1	84	49.282	Cavia_porcellus
ENSLBEG00000002280	-	88	50.971	ENSCCAG00000029225	SRA1	83	49.302	Cebus_capucinus
ENSLBEG00000002280	-	88	50.485	ENSCATG00000044295	SRA1	84	50.952	Cercocebus_atys
ENSLBEG00000002280	-	87	49.758	ENSCLAG00000003359	SRA1	84	50.000	Chinchilla_lanigera
ENSLBEG00000002280	-	88	50.485	ENSCSAG00000012824	SRA1	84	50.952	Chlorocebus_sabaeus
ENSLBEG00000002280	-	89	49.524	ENSCPBG00000007590	SRA1	90	48.165	Chrysemys_picta_bellii
ENSLBEG00000002280	-	82	34.375	ENSCING00000014906	-	96	32.990	Ciona_intestinalis
ENSLBEG00000002280	-	88	49.029	ENSCANG00000036375	SRA1	84	49.528	Colobus_angolensis_palliatus
ENSLBEG00000002280	-	88	50.962	ENSCGRG00001005557	-	81	49.763	Cricetulus_griseus_chok1gshd
ENSLBEG00000002280	-	88	50.962	ENSCGRG00000007079	-	85	50.000	Cricetulus_griseus_crigri
ENSLBEG00000002280	-	91	69.340	ENSCSEG00000020723	-	99	67.757	Cynoglossus_semilaevis
ENSLBEG00000002280	-	99	64.681	ENSCVAG00000019294	-	91	65.179	Cyprinodon_variegatus
ENSLBEG00000002280	-	89	56.808	ENSDARG00000053619	sra1	100	52.174	Danio_rerio
ENSLBEG00000002280	-	87	49.758	ENSDNOG00000045277	SRA1	80	47.664	Dasypus_novemcinctus
ENSLBEG00000002280	-	51	55.372	ENSDORG00000026790	-	72	55.285	Dipodomys_ordii
ENSLBEG00000002280	-	85	35.149	ENSEBUG00000006644	sra1	96	34.466	Eptatretus_burgeri
ENSLBEG00000002280	-	88	48.826	ENSEASG00005017485	SRA1	80	50.000	Equus_asinus_asinus
ENSLBEG00000002280	-	87	49.057	ENSECAG00000014366	SRA1	83	50.237	Equus_caballus
ENSLBEG00000002280	-	89	56.250	ENSELUG00000004809	sra1	92	58.929	Esox_lucius
ENSLBEG00000002280	-	93	48.182	ENSFCAG00000035180	SRA1	89	47.111	Felis_catus
ENSLBEG00000002280	-	88	51.691	ENSFALG00000009306	SRA1	83	50.698	Ficedula_albicollis
ENSLBEG00000002280	-	87	47.596	ENSFDAG00000001810	SRA1	83	49.528	Fukomys_damarensis
ENSLBEG00000002280	-	91	67.593	ENSFHEG00000003267	-	83	67.593	Fundulus_heteroclitus
ENSLBEG00000002280	-	89	57.692	ENSGMOG00000012361	-	98	57.466	Gadus_morhua
ENSLBEG00000002280	-	87	46.341	ENSGALG00000040453	SRA1	88	48.372	Gallus_gallus
ENSLBEG00000002280	-	95	64.758	ENSGAFG00000022037	-	67	63.436	Gambusia_affinis
ENSLBEG00000002280	-	93	69.266	ENSGACG00000020904	-	96	68.511	Gasterosteus_aculeatus
ENSLBEG00000002280	-	89	50.476	ENSGAGG00000000284	SRA1	91	48.416	Gopherus_agassizii
ENSLBEG00000002280	-	88	51.456	ENSGGOG00000042935	SRA1	83	51.905	Gorilla_gorilla
ENSLBEG00000002280	-	70	71.951	ENSHBUG00000010633	-	88	76.812	Haplochromis_burtoni
ENSLBEG00000002280	-	89	48.095	ENSHGLG00000010259	SRA1	84	48.341	Heterocephalus_glaber_female
ENSLBEG00000002280	-	89	48.095	ENSHGLG00100006596	SRA1	84	48.341	Heterocephalus_glaber_male
ENSLBEG00000002280	-	89	63.636	ENSHCOG00000013146	-	99	59.494	Hippocampus_comes
ENSLBEG00000002280	-	90	51.316	ENSIPUG00000020481	sra1	94	51.316	Ictalurus_punctatus
ENSLBEG00000002280	-	88	46.575	ENSSTOG00000024229	SRA1	83	49.524	Ictidomys_tridecemlineatus
ENSLBEG00000002280	-	87	50.000	ENSJJAG00000014326	-	84	48.341	Jaculus_jaculus
ENSLBEG00000002280	-	87	49.770	ENSLACG00000007697	SRA1	88	49.309	Latimeria_chalumnae
ENSLBEG00000002280	-	88	52.885	ENSLOCG00000011051	SRA1	89	51.598	Lepisosteus_oculatus
ENSLBEG00000002280	-	88	48.571	ENSLAFG00000020802	SRA1	83	49.761	Loxodonta_africana
ENSLBEG00000002280	-	88	50.485	ENSMFAG00000007347	SRA1	84	50.952	Macaca_fascicularis
ENSLBEG00000002280	-	88	50.485	ENSMMUG00000001706	SRA1	84	50.952	Macaca_mulatta
ENSLBEG00000002280	-	88	50.485	ENSMNEG00000029401	SRA1	84	50.952	Macaca_nemestrina
ENSLBEG00000002280	-	88	50.971	ENSMLEG00000036807	SRA1	84	50.476	Mandrillus_leucophaeus
ENSLBEG00000002280	-	92	71.622	ENSMAMG00000012359	-	82	71.622	Mastacembelus_armatus
ENSLBEG00000002280	-	96	70.870	ENSMZEG00005025134	-	87	68.033	Maylandia_zebra
ENSLBEG00000002280	-	96	70.870	ENSMZEG00005024979	-	87	68.033	Maylandia_zebra
ENSLBEG00000002280	-	92	47.210	ENSMAUG00000012789	-	93	46.121	Mesocricetus_auratus
ENSLBEG00000002280	-	88	50.962	ENSMICG00000044059	SRA1	84	50.237	Microcebus_murinus
ENSLBEG00000002280	-	87	49.275	ENSMOCG00000008156	-	83	48.598	Microtus_ochrogaster
ENSLBEG00000002280	-	99	56.432	ENSMMOG00000017400	-	99	56.432	Mola_mola
ENSLBEG00000002280	-	94	70.852	ENSMALG00000003857	-	95	72.321	Monopterus_albus
ENSLBEG00000002280	-	88	48.077	ENSMUSG00000006050	Sra1	87	48.341	Mus_musculus
ENSLBEG00000002280	-	88	50.000	ENSMPUG00000008493	SRA1	83	50.237	Mustela_putorius_furo
ENSLBEG00000002280	-	84	51.515	ENSMLUG00000022959	SRA1	85	49.754	Myotis_lucifugus
ENSLBEG00000002280	-	88	46.667	ENSNGAG00000017765	-	89	49.065	Nannospalax_galili
ENSLBEG00000002280	-	88	50.971	ENSNLEG00000034424	SRA1	83	51.429	Nomascus_leucogenys
ENSLBEG00000002280	-	87	50.000	ENSMEUG00000013640	SRA1	84	47.196	Notamacropus_eugenii
ENSLBEG00000002280	-	88	46.154	ENSOPRG00000018381	SRA1	84	46.919	Ochotona_princeps
ENSLBEG00000002280	-	87	49.756	ENSODEG00000003997	SRA1	81	49.763	Octodon_degus
ENSLBEG00000002280	-	92	69.362	ENSONIG00000017849	-	93	70.996	Oreochromis_niloticus
ENSLBEG00000002280	-	88	43.836	ENSOCUG00000021569	SRA1	84	48.571	Oryctolagus_cuniculus
ENSLBEG00000002280	-	95	57.500	ENSORLG00000022839	sra1	96	57.500	Oryzias_latipes
ENSLBEG00000002280	-	95	58.333	ENSORLG00020013412	-	96	58.750	Oryzias_latipes_hni
ENSLBEG00000002280	-	95	56.485	ENSOMEG00000009187	-	96	56.067	Oryzias_melastigma
ENSLBEG00000002280	-	87	49.268	ENSOGAG00000025549	SRA1	83	49.289	Otolemur_garnettii
ENSLBEG00000002280	-	88	49.029	ENSOARG00000018101	SRA1	85	48.585	Ovis_aries
ENSLBEG00000002280	-	88	51.456	ENSPPAG00000032469	SRA1	83	51.905	Pan_paniscus
ENSLBEG00000002280	-	93	48.182	ENSPPRG00000023984	SRA1	89	47.111	Panthera_pardus
ENSLBEG00000002280	-	93	48.182	ENSPTIG00000011361	SRA1	89	47.111	Panthera_tigris_altaica
ENSLBEG00000002280	-	88	51.456	ENSPTRG00000017314	SRA1	83	51.905	Pan_troglodytes
ENSLBEG00000002280	-	88	51.208	ENSPANG00000008615	SRA1	84	50.943	Papio_anubis
ENSLBEG00000002280	-	89	60.952	ENSPKIG00000019491	sra1	91	60.476	Paramormyrops_kingsleyae
ENSLBEG00000002280	-	69	55.280	ENSPMGG00000018172	-	79	50.000	Periophthalmus_magnuspinnatus
ENSLBEG00000002280	-	90	48.598	ENSPEMG00000000489	-	81	46.606	Peromyscus_maniculatus_bairdii
ENSLBEG00000002280	-	86	33.184	ENSPMAG00000008631	sra1	88	37.327	Petromyzon_marinus
ENSLBEG00000002280	-	87	50.000	ENSPCIG00000017474	SRA1	79	47.664	Phascolarctos_cinereus
ENSLBEG00000002280	-	92	65.753	ENSPFOG00000019038	-	85	66.667	Poecilia_formosa
ENSLBEG00000002280	-	92	65.753	ENSPLAG00000002438	-	85	66.667	Poecilia_latipinna
ENSLBEG00000002280	-	92	66.667	ENSPMEG00000000520	-	85	67.580	Poecilia_mexicana
ENSLBEG00000002280	-	94	59.127	ENSPREG00000003284	-	90	58.333	Poecilia_reticulata
ENSLBEG00000002280	-	88	50.000	ENSPPYG00000015855	SRA1	83	51.456	Pongo_abelii
ENSLBEG00000002280	-	69	39.157	ENSPCAG00000016361	SRA1	92	40.854	Procavia_capensis
ENSLBEG00000002280	-	88	50.962	ENSPCOG00000010221	SRA1	83	50.237	Propithecus_coquereli
ENSLBEG00000002280	-	88	50.718	ENSPVAG00000009698	SRA1	84	48.585	Pteropus_vampyrus
ENSLBEG00000002280	-	96	70.870	ENSPNYG00000022136	-	87	67.623	Pundamilia_nyererei
ENSLBEG00000002280	-	90	49.315	ENSPNAG00000020396	sra1	77	51.556	Pygocentrus_nattereri
ENSLBEG00000002280	-	88	48.558	ENSRNOG00000018089	Sra1	84	49.289	Rattus_norvegicus
ENSLBEG00000002280	-	88	50.000	ENSRBIG00000035226	SRA1	84	50.472	Rhinopithecus_bieti
ENSLBEG00000002280	-	88	50.000	ENSRROG00000011630	SRA1	84	50.000	Rhinopithecus_roxellana
ENSLBEG00000002280	-	88	51.942	ENSSBOG00000011756	SRA1	84	51.196	Saimiri_boliviensis_boliviensis
ENSLBEG00000002280	-	87	47.143	ENSSHAG00000016297	SRA1	84	46.729	Sarcophilus_harrisii
ENSLBEG00000002280	-	89	52.381	ENSSFOG00015022155	sra1	91	51.351	Scleropages_formosus
ENSLBEG00000002280	-	95	71.179	ENSSMAG00000016237	-	88	71.861	Scophthalmus_maximus
ENSLBEG00000002280	-	95	69.737	ENSSDUG00000023303	-	96	71.616	Seriola_dumerili
ENSLBEG00000002280	-	99	54.113	ENSSLDG00000007472	SRA1	83	88.636	Seriola_lalandi_dorsalis
ENSLBEG00000002280	-	87	48.148	ENSSPUG00000015651	SRA1	97	47.414	Sphenodon_punctatus
ENSLBEG00000002280	-	94	67.373	ENSSPAG00000011180	-	93	74.107	Stegastes_partitus
ENSLBEG00000002280	-	88	50.962	ENSSSCG00000014365	SRA1	70	50.000	Sus_scrofa
ENSLBEG00000002280	-	96	60.166	ENSTRUG00000007664	-	93	60.870	Takifugu_rubripes
ENSLBEG00000002280	-	92	65.899	ENSTNIG00000007605	-	85	65.899	Tetraodon_nigroviridis
ENSLBEG00000002280	-	92	48.165	ENSTTRG00000005574	SRA1	89	47.982	Tursiops_truncatus
ENSLBEG00000002280	-	88	50.476	ENSUAMG00000005355	SRA1	88	50.237	Ursus_americanus
ENSLBEG00000002280	-	85	51.485	ENSUMAG00000013276	SRA1	71	51.724	Ursus_maritimus
ENSLBEG00000002280	-	88	49.524	ENSVVUG00000012374	SRA1	84	50.000	Vulpes_vulpes
ENSLBEG00000002280	-	87	51.923	ENSXETG00000032326	sra1	89	50.235	Xenopus_tropicalis
ENSLBEG00000002280	-	92	67.273	ENSXMAG00000006613	-	90	68.182	Xiphophorus_maculatus