EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLBEG00000002281 (Gene tree)
Gene ID
109991731
Gene Symbol
RPA1 (1 of many)
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A 70 kDa DNA-binding subunit-like
Gene Type
protein_coding
Species
Labrus_bergylta
Status
putative
Strand
Minus strand
Length
42724 bases
Position
chrFKLU01000212.1:523523-566246
Accession
109991731
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLBEP00000002949tRNA_anti-codonPF01336.257.4e-1211
ENSLBEP00000002897tRNA_anti-codonPF01336.257.8e-1211
ENSLBEP00000002920tRNA_anti-codonPF01336.257.9e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLBET00000003082RPA1 (1 of many)-2024053-ENSLBEP00000002920689 (aa)--
ENSLBET00000003059RPA1 (1 of many)-2014101XM_020644087ENSLBEP00000002897705 (aa)XP_020499743UPI0009B2ECB3
ENSLBET00000003111RPA1 (1 of many)-2034182-ENSLBEP00000002949669 (aa)--
Gene Model
Click here to download ENSLBEG00000002281's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000002281's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLBEG00000002281RPA18266.893ENSLBEG00000021604rpa19766.893
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLBEG00000002281RPA19974.363ENSAPOG00000019409RPA19974.474Acanthochromis_polyacanthus
ENSLBEG00000002281RPA18569.495ENSAPOG00000011658rpa19969.495Acanthochromis_polyacanthus
ENSLBEG00000002281RPA18462.896ENSAMEG00000007706RPA19462.896Ailuropoda_melanoleuca
ENSLBEG00000002281RPA19970.136ENSACIG00000012881RPA19971.386Amphilophus_citrinellus
ENSLBEG00000002281RPA18259.545ENSACIG00000007277rpa19759.545Amphilophus_citrinellus
ENSLBEG00000002281RPA18369.954ENSAOCG00000023376rpa19769.954Amphiprion_ocellaris
ENSLBEG00000002281RPA19969.830ENSAOCG00000009003RPA19970.822Amphiprion_ocellaris
ENSLBEG00000002281RPA19971.955ENSAPEG00000019132RPA19972.370Amphiprion_percula
ENSLBEG00000002281RPA18469.794ENSAPEG00000008634rpa19769.794Amphiprion_percula
ENSLBEG00000002281RPA19974.716ENSATEG00000006443RPA19974.858Anabas_testudineus
ENSLBEG00000002281RPA17770.642ENSATEG00000022024rpa19470.642Anabas_testudineus
ENSLBEG00000002281RPA18854.393ENSAPLG00000012442RPA110054.393Anas_platyrhynchos
ENSLBEG00000002281RPA18460.407ENSACAG00000014490RPA19960.407Anolis_carolinensis
ENSLBEG00000002281RPA18859.834ENSANAG00000023456RPA19863.039Aotus_nancymaae
ENSLBEG00000002281RPA19583.475ENSACLG00000005223RPA19969.958Astatotilapia_calliptera
ENSLBEG00000002281RPA17572.018ENSACLG00000006640rpa19372.018Astatotilapia_calliptera
ENSLBEG00000002281RPA17969.300ENSAMXG00000008418rpa19969.300Astyanax_mexicanus
ENSLBEG00000002281RPA18661.678ENSBTAG00000009711RPA19861.678Bos_taurus
ENSLBEG00000002281RPA17963.039ENSCJAG00000001848RPA19663.039Callithrix_jacchus
ENSLBEG00000002281RPA18561.905ENSCAFG00000019249RPA19762.358Canis_familiaris
ENSLBEG00000002281RPA18561.905ENSCAFG00020009847RPA19762.358Canis_lupus_dingo
ENSLBEG00000002281RPA17961.451ENSCHIG00000026308RPA19958.958Capra_hircus
ENSLBEG00000002281RPA18563.098ENSTSYG00000003482-9663.098Carlito_syrichta
ENSLBEG00000002281RPA18663.781ENSCPOG00000000035RPA19963.781Cavia_porcellus
ENSLBEG00000002281RPA17951.577ENSCCAG00000010981RPA19651.577Cebus_capucinus
ENSLBEG00000002281RPA18959.361ENSCLAG00000015045-9959.361Chinchilla_lanigera
ENSLBEG00000002281RPA18564.920ENSCLAG00000005185-9764.920Chinchilla_lanigera
ENSLBEG00000002281RPA18051.351ENSCSAG00000013833RPA19751.351Chlorocebus_sabaeus
ENSLBEG00000002281RPA16563.761ENSCHOG00000009454-9963.761Choloepus_hoffmanni
ENSLBEG00000002281RPA18363.991ENSCHOG00000013540-9663.991Choloepus_hoffmanni
ENSLBEG00000002281RPA18465.682ENSCPBG00000020377RPA19665.682Chrysemys_picta_bellii
ENSLBEG00000002281RPA18646.545ENSCING00000023482-9946.545Ciona_intestinalis
ENSLBEG00000002281RPA18363.265ENSCANG00000030911RPA19863.265Colobus_angolensis_palliatus
ENSLBEG00000002281RPA18263.073ENSCGRG00001008197Rpa19463.073Cricetulus_griseus_chok1gshd
ENSLBEG00000002281RPA16563.073ENSCGRG00000000582Rpa18563.073Cricetulus_griseus_crigri
ENSLBEG00000002281RPA18666.225ENSCSEG00000013066rpa19966.225Cynoglossus_semilaevis
ENSLBEG00000002281RPA19961.506ENSCSEG00000012726RPA19962.424Cynoglossus_semilaevis
ENSLBEG00000002281RPA19372.000ENSCVAG00000013446-9569.585Cyprinodon_variegatus
ENSLBEG00000002281RPA17968.578ENSCVAG00000019431rpa19968.182Cyprinodon_variegatus
ENSLBEG00000002281RPA18668.271ENSDARG00000003938rpa19968.271Danio_rerio
ENSLBEG00000002281RPA18463.492ENSDNOG00000017218RPA19463.492Dasypus_novemcinctus
ENSLBEG00000002281RPA18960.833ENSDORG00000006199Rpa19960.833Dipodomys_ordii
ENSLBEG00000002281RPA18144.780FBgn0010173RpA-709645.708Drosophila_melanogaster
ENSLBEG00000002281RPA17462.887ENSETEG00000017608RPA18262.887Echinops_telfairi
ENSLBEG00000002281RPA18960.211ENSEASG00005009372RPA19962.585Equus_asinus_asinus
ENSLBEG00000002281RPA18662.358ENSECAG00000023886RPA19862.358Equus_caballus
ENSLBEG00000002281RPA16263.876ENSEEUG00000002186-6863.876Erinaceus_europaeus
ENSLBEG00000002281RPA18968.834ENSELUG00000021071rpa19968.834Esox_lucius
ENSLBEG00000002281RPA16272.902ENSELUG00000006136RPA19272.902Esox_lucius
ENSLBEG00000002281RPA18563.242ENSFCAG00000006306RPA19763.242Felis_catus
ENSLBEG00000002281RPA19263.333ENSFALG00000006575RPA19963.333Ficedula_albicollis
ENSLBEG00000002281RPA18663.699ENSFDAG00000007720RPA19963.699Fukomys_damarensis
ENSLBEG00000002281RPA18170.183ENSFHEG00000003580rpa19470.183Fundulus_heteroclitus
ENSLBEG00000002281RPA17967.955ENSGMOG00000010382rpa19767.955Gadus_morhua
ENSLBEG00000002281RPA18463.261ENSGALG00000003072RPA19963.261Gallus_gallus
ENSLBEG00000002281RPA18268.578ENSGAFG00000012916rpa19668.578Gambusia_affinis
ENSLBEG00000002281RPA19968.980ENSGAFG00000020953RPA19969.263Gambusia_affinis
ENSLBEG00000002281RPA18068.636ENSGACG00000010856rpa19469.213Gasterosteus_aculeatus
ENSLBEG00000002281RPA18765.455ENSGAGG00000013611RPA19965.455Gopherus_agassizii
ENSLBEG00000002281RPA18563.326ENSGGOG00000014186RPA19963.326Gorilla_gorilla
ENSLBEG00000002281RPA18670.149ENSHBUG00000009348RPA19970.149Haplochromis_burtoni
ENSLBEG00000002281RPA18371.789ENSHBUG00000017773rpa19771.789Haplochromis_burtoni
ENSLBEG00000002281RPA18563.470ENSHGLG00000008846RPA19763.470Heterocephalus_glaber_female
ENSLBEG00000002281RPA18453.776ENSHGLG00100002005-9653.776Heterocephalus_glaber_male
ENSLBEG00000002281RPA18563.470ENSHGLG00100017755-9763.470Heterocephalus_glaber_male
ENSLBEG00000002281RPA18559.132ENSHGLG00100000799-9759.132Heterocephalus_glaber_male
ENSLBEG00000002281RPA18361.556ENSHCOG00000001401rpa19957.746Hippocampus_comes
ENSLBEG00000002281RPA18453.132ENSHCOG00000000351RPA19856.368Hippocampus_comes
ENSLBEG00000002281RPA18669.144ENSIPUG00000004400rpa19669.300Ictalurus_punctatus
ENSLBEG00000002281RPA18361.468ENSSTOG00000022475RPA19661.468Ictidomys_tridecemlineatus
ENSLBEG00000002281RPA18563.242ENSJJAG00000000876Rpa19763.242Jaculus_jaculus
ENSLBEG00000002281RPA17968.778ENSKMAG00000005605rpa19669.161Kryptolebias_marmoratus
ENSLBEG00000002281RPA19675.556ENSKMAG00000000234RPA19975.556Kryptolebias_marmoratus
ENSLBEG00000002281RPA17255.876ENSLACG00000007210RPA19555.876Latimeria_chalumnae
ENSLBEG00000002281RPA18367.043ENSLOCG00000006397rpa19767.043Lepisosteus_oculatus
ENSLBEG00000002281RPA18462.500ENSLAFG00000015354RPA19762.415Loxodonta_africana
ENSLBEG00000002281RPA16463.372ENSMFAG00000036138-9563.372Macaca_fascicularis
ENSLBEG00000002281RPA18259.410ENSMMUG00000002442-9559.410Macaca_mulatta
ENSLBEG00000002281RPA17862.812ENSMMUG00000011604-9562.812Macaca_mulatta
ENSLBEG00000002281RPA18062.132ENSMNEG00000031632-9762.132Macaca_nemestrina
ENSLBEG00000002281RPA18159.142ENSMNEG00000029837-9959.142Macaca_nemestrina
ENSLBEG00000002281RPA17860.091ENSMLEG00000038768-9660.091Mandrillus_leucophaeus
ENSLBEG00000002281RPA18368.650ENSMAMG00000017993rpa19668.650Mastacembelus_armatus
ENSLBEG00000002281RPA19975.387ENSMAMG00000020097RPA19975.387Mastacembelus_armatus
ENSLBEG00000002281RPA19583.475ENSMZEG00005024731RPA19969.958Maylandia_zebra
ENSLBEG00000002281RPA18371.789ENSMZEG00005007551rpa19771.789Maylandia_zebra
ENSLBEG00000002281RPA18462.609ENSMGAG00000005315RPA19962.609Meleagris_gallopavo
ENSLBEG00000002281RPA17663.303ENSMAUG00000010474Rpa19663.303Mesocricetus_auratus
ENSLBEG00000002281RPA18463.023ENSMICG00000012867RPA19862.642Microcebus_murinus
ENSLBEG00000002281RPA18561.697ENSMOCG00000013019Rpa19761.697Microtus_ochrogaster
ENSLBEG00000002281RPA19965.468ENSMMOG00000010868RPA19783.453Mola_mola
ENSLBEG00000002281RPA18569.318ENSMMOG00000014292rpa19969.318Mola_mola
ENSLBEG00000002281RPA18964.318ENSMODG00000010549RPA19964.318Monodelphis_domestica
ENSLBEG00000002281RPA18668.636ENSMALG00000011453rpa19968.636Monopterus_albus
ENSLBEG00000002281RPA19973.222ENSMALG00000001208RPA19973.513Monopterus_albus
ENSLBEG00000002281RPA18563.073MGP_CAROLIEiJ_G0016734Rpa19763.073Mus_caroli
ENSLBEG00000002281RPA18563.303ENSMUSG00000000751Rpa19863.303Mus_musculus
ENSLBEG00000002281RPA19459.381MGP_PahariEiJ_G0017871Rpa19563.532Mus_pahari
ENSLBEG00000002281RPA18563.532MGP_SPRETEiJ_G0017577Rpa19863.532Mus_spretus
ENSLBEG00000002281RPA18562.132ENSMPUG00000013119RPA19762.132Mustela_putorius_furo
ENSLBEG00000002281RPA19159.138ENSMLUG00000006113RPA19559.138Myotis_lucifugus
ENSLBEG00000002281RPA18462.723ENSNGAG00000004522Rpa19462.723Nannospalax_galili
ENSLBEG00000002281RPA17671.560ENSNBRG00000020595rpa19371.560Neolamprologus_brichardi
ENSLBEG00000002281RPA19961.429ENSNBRG00000009672RPA19762.143Neolamprologus_brichardi
ENSLBEG00000002281RPA18063.554ENSNLEG00000017149RPA19763.554Nomascus_leucogenys
ENSLBEG00000002281RPA17861.972ENSMEUG00000006714RPA18861.972Notamacropus_eugenii
ENSLBEG00000002281RPA18664.465ENSODEG00000009038RPA19764.465Octodon_degus
ENSLBEG00000002281RPA18670.872ENSONIG00000013135rpa19870.872Oreochromis_niloticus
ENSLBEG00000002281RPA18763.492ENSOANG00000010880RPA19863.492Ornithorhynchus_anatinus
ENSLBEG00000002281RPA18562.955ENSOCUG00000001504RPA19662.955Oryctolagus_cuniculus
ENSLBEG00000002281RPA18266.958ENSORLG00000004856rpa19766.958Oryzias_latipes
ENSLBEG00000002281RPA19967.092ENSORLG00000003368RPA19966.950Oryzias_latipes
ENSLBEG00000002281RPA18267.396ENSORLG00020008980rpa19767.396Oryzias_latipes_hni
ENSLBEG00000002281RPA19967.518ENSORLG00020015284RPA19967.518Oryzias_latipes_hni
ENSLBEG00000002281RPA19966.525ENSORLG00015020383RPA19965.957Oryzias_latipes_hsok
ENSLBEG00000002281RPA16578.719ENSORLG00015005867-9978.719Oryzias_latipes_hsok
ENSLBEG00000002281RPA18267.396ENSORLG00015013982rpa19767.396Oryzias_latipes_hsok
ENSLBEG00000002281RPA19674.145ENSOMEG00000011040RPA19877.650Oryzias_melastigma
ENSLBEG00000002281RPA17968.192ENSOMEG00000004704rpa19468.192Oryzias_melastigma
ENSLBEG00000002281RPA19448.187ENSOGAG00000029379-9948.187Otolemur_garnettii
ENSLBEG00000002281RPA19459.959ENSOGAG00000005581-10059.959Otolemur_garnettii
ENSLBEG00000002281RPA17961.451ENSOARG00000014479RPA19958.958Ovis_aries
ENSLBEG00000002281RPA18063.554ENSPPAG00000039680RPA19863.554Pan_paniscus
ENSLBEG00000002281RPA18662.896ENSPPRG00000011807RPA19862.896Panthera_pardus
ENSLBEG00000002281RPA18662.896ENSPTIG00000007898RPA19862.896Panthera_tigris_altaica
ENSLBEG00000002281RPA18063.326ENSPTRG00000008539RPA19863.326Pan_troglodytes
ENSLBEG00000002281RPA18062.812ENSPANG00000024592RPA19762.812Papio_anubis
ENSLBEG00000002281RPA17968.565ENSPKIG00000008053rpa19768.565Paramormyrops_kingsleyae
ENSLBEG00000002281RPA18564.318ENSPSIG00000015617RPA19864.318Pelodiscus_sinensis
ENSLBEG00000002281RPA19079.258ENSPMGG00000000543RPA19979.258Periophthalmus_magnuspinnatus
ENSLBEG00000002281RPA17969.300ENSPMGG00000011589rpa19768.904Periophthalmus_magnuspinnatus
ENSLBEG00000002281RPA18562.385ENSPEMG00000021061Rpa19762.385Peromyscus_maniculatus_bairdii
ENSLBEG00000002281RPA17964.318ENSPCIG00000019049RPA19964.318Phascolarctos_cinereus
ENSLBEG00000002281RPA18767.489ENSPFOG00000003987rpa19967.489Poecilia_formosa
ENSLBEG00000002281RPA19567.953ENSPLAG00000008844-9768.249Poecilia_latipinna
ENSLBEG00000002281RPA18269.266ENSPLAG00000004984rpa19469.266Poecilia_latipinna
ENSLBEG00000002281RPA19568.398ENSPMEG00000003627-9768.694Poecilia_mexicana
ENSLBEG00000002281RPA18368.864ENSPMEG00000020602rpa19768.864Poecilia_mexicana
ENSLBEG00000002281RPA19970.963ENSPREG00000010119RPA110070.370Poecilia_reticulata
ENSLBEG00000002281RPA17661.520ENSPREG00000010174rpa19061.520Poecilia_reticulata
ENSLBEG00000002281RPA19258.763ENSPCOG00000001799RPA19958.763Propithecus_coquereli
ENSLBEG00000002281RPA18662.358ENSPVAG00000002149RPA19862.358Pteropus_vampyrus
ENSLBEG00000002281RPA19583.686ENSPNYG00000024165RPA19970.099Pundamilia_nyererei
ENSLBEG00000002281RPA18372.018ENSPNYG00000016316rpa19772.018Pundamilia_nyererei
ENSLBEG00000002281RPA18258.710ENSPNAG00000008599rpa19956.757Pygocentrus_nattereri
ENSLBEG00000002281RPA17863.532ENSRNOG00000003123Rpa19763.532Rattus_norvegicus
ENSLBEG00000002281RPA18662.812ENSRBIG00000036587RPA19762.812Rhinopithecus_bieti
ENSLBEG00000002281RPA18657.823ENSRROG00000043278RPA19757.823Rhinopithecus_roxellana
ENSLBEG00000002281RPA16734.498YAR007CRFA17334.498Saccharomyces_cerevisiae
ENSLBEG00000002281RPA17763.265ENSSBOG00000030233RPA19663.265Saimiri_boliviensis_boliviensis
ENSLBEG00000002281RPA18765.000ENSSHAG00000007969RPA19565.000Sarcophilus_harrisii
ENSLBEG00000002281RPA18271.041ENSSFOG00015005362rpa18971.394Scleropages_formosus
ENSLBEG00000002281RPA19971.449ENSSMAG00000019746RPA19970.780Scophthalmus_maximus
ENSLBEG00000002281RPA19975.210ENSSDUG00000016358RPA19976.190Seriola_dumerili
ENSLBEG00000002281RPA18469.074ENSSDUG00000011949rpa19869.074Seriola_dumerili
ENSLBEG00000002281RPA18469.074ENSSLDG00000011806rpa19869.074Seriola_lalandi_dorsalis
ENSLBEG00000002281RPA19975.070ENSSLDG00000020784RPA19975.770Seriola_lalandi_dorsalis
ENSLBEG00000002281RPA17658.017ENSSARG00000007506RPA18258.017Sorex_araneus
ENSLBEG00000002281RPA19059.494ENSSPUG00000007223RPA19859.494Sphenodon_punctatus
ENSLBEG00000002281RPA18269.318ENSSPAG00000009903rpa19669.318Stegastes_partitus
ENSLBEG00000002281RPA19184.532ENSSPAG00000011165RPA19984.532Stegastes_partitus
ENSLBEG00000002281RPA17962.896ENSSSCG00000017822RPA19862.896Sus_scrofa
ENSLBEG00000002281RPA19163.393ENSTGUG00000005775RPA19963.393Taeniopygia_guttata
ENSLBEG00000002281RPA18668.636ENSTRUG00000003616rpa19968.636Takifugu_rubripes
ENSLBEG00000002281RPA19871.217ENSTRUG00000000405RPA19968.785Takifugu_rubripes
ENSLBEG00000002281RPA19167.316ENSTNIG00000016199rpa19968.707Tetraodon_nigroviridis
ENSLBEG00000002281RPA16563.409ENSTBEG00000002709RPA17463.409Tupaia_belangeri
ENSLBEG00000002281RPA18861.905ENSTTRG00000001169RPA19961.905Tursiops_truncatus
ENSLBEG00000002281RPA16978.846ENSUAMG00000015676RPA19378.846Ursus_americanus
ENSLBEG00000002281RPA18062.585ENSUMAG00000009328RPA19762.585Ursus_maritimus
ENSLBEG00000002281RPA19456.707ENSVPAG00000009443RPA19956.707Vicugna_pacos
ENSLBEG00000002281RPA18562.132ENSVVUG00000021715RPA19762.585Vulpes_vulpes
ENSLBEG00000002281RPA18564.206ENSXETG00000013538rpa19964.350Xenopus_tropicalis
ENSLBEG00000002281RPA18069.307ENSXCOG00000010068rpa19469.307Xiphophorus_couchianus
ENSLBEG00000002281RPA19777.800ENSXCOG00000009899-9977.800Xiphophorus_couchianus
ENSLBEG00000002281RPA18368.421ENSXMAG00000004102rpa19768.027Xiphophorus_maculatus
ENSLBEG00000002281RPA19971.955ENSXMAG00000010333RPA19971.915Xiphophorus_maculatus

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