EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000002306 (Gene tree)
Gene ID: 109989434
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 14511 bases
Position: chrFKLU01000001.1:2256179-2270689
Accession: 109989434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000003028	Suf	PF05843.14	2.3e-83	1	1
ENSLBEP00000003004	Suf	PF05843.14	2.4e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000003167	-	2808	XM_020641225	ENSLBEP00000003004	716 (aa)	XP_020496881	UPI0009B4C4DA
ENSLBET00000003191	-	2145	-	ENSLBEP00000003028	714 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000002306's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000002306's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000002306	cstf3	100	90.111	ENSG00000176102	CSTF3	100	90.111	Homo_sapiens
ENSLBEG00000002306	cstf3	100	97.905	ENSAPOG00000014054	cstf3	100	97.905	Acanthochromis_polyacanthus
ENSLBEG00000002306	cstf3	99	90.678	ENSAMEG00000007187	CSTF3	98	90.678	Ailuropoda_melanoleuca
ENSLBEG00000002306	cstf3	87	91.814	ENSACIG00000005539	cstf3	100	91.814	Amphilophus_citrinellus
ENSLBEG00000002306	cstf3	100	97.905	ENSAOCG00000010930	cstf3	100	97.905	Amphiprion_ocellaris
ENSLBEG00000002306	cstf3	100	97.905	ENSAPEG00000007903	cstf3	100	97.905	Amphiprion_percula
ENSLBEG00000002306	cstf3	100	97.207	ENSATEG00000000190	cstf3	100	97.207	Anabas_testudineus
ENSLBEG00000002306	cstf3	99	90.819	ENSAPLG00000007217	CSTF3	100	90.819	Anas_platyrhynchos
ENSLBEG00000002306	cstf3	100	90.947	ENSACAG00000002823	CSTF3	100	90.947	Anolis_carolinensis
ENSLBEG00000002306	cstf3	100	90.111	ENSANAG00000020699	CSTF3	95	95.933	Aotus_nancymaae
ENSLBEG00000002306	cstf3	100	96.508	ENSACLG00000007820	cstf3	100	96.508	Astatotilapia_calliptera
ENSLBEG00000002306	cstf3	100	92.340	ENSAMXG00000014198	cstf3	100	92.618	Astyanax_mexicanus
ENSLBEG00000002306	cstf3	100	90.111	ENSBTAG00000008617	CSTF3	100	90.504	Bos_taurus
ENSLBEG00000002306	cstf3	97	47.554	WBGene00006307	suf-1	99	48.027	Caenorhabditis_elegans
ENSLBEG00000002306	cstf3	100	90.111	ENSCJAG00000005533	CSTF3	100	90.111	Callithrix_jacchus
ENSLBEG00000002306	cstf3	100	90.111	ENSCAFG00000007264	CSTF3	100	90.111	Canis_familiaris
ENSLBEG00000002306	cstf3	99	90.819	ENSCAFG00020002715	CSTF3	98	90.819	Canis_lupus_dingo
ENSLBEG00000002306	cstf3	98	89.331	ENSCHIG00000016418	CSTF3	100	90.080	Capra_hircus
ENSLBEG00000002306	cstf3	99	91.102	ENSTSYG00000000451	CSTF3	99	96.437	Carlito_syrichta
ENSLBEG00000002306	cstf3	83	88.389	ENSCAPG00000010958	CSTF3	98	88.389	Cavia_aperea
ENSLBEG00000002306	cstf3	100	90.111	ENSCPOG00000005545	CSTF3	100	90.336	Cavia_porcellus
ENSLBEG00000002306	cstf3	100	90.111	ENSCCAG00000024790	CSTF3	96	96.437	Cebus_capucinus
ENSLBEG00000002306	cstf3	100	90.111	ENSCATG00000007080	CSTF3	100	90.111	Cercocebus_atys
ENSLBEG00000002306	cstf3	100	90.111	ENSCLAG00000016179	CSTF3	100	90.111	Chinchilla_lanigera
ENSLBEG00000002306	cstf3	78	97.368	ENSCHOG00000002497	CSTF3	79	97.368	Choloepus_hoffmanni
ENSLBEG00000002306	cstf3	100	90.251	ENSCPBG00000006753	CSTF3	100	90.251	Chrysemys_picta_bellii
ENSLBEG00000002306	cstf3	99	61.335	ENSCING00000006401	-	99	61.188	Ciona_intestinalis
ENSLBEG00000002306	cstf3	99	61.181	ENSCSAVG00000004851	-	100	61.181	Ciona_savignyi
ENSLBEG00000002306	cstf3	100	90.111	ENSCANG00000035468	CSTF3	100	90.111	Colobus_angolensis_palliatus
ENSLBEG00000002306	cstf3	100	89.972	ENSCGRG00001014773	Cstf3	100	89.972	Cricetulus_griseus_chok1gshd
ENSLBEG00000002306	cstf3	100	89.972	ENSCGRG00000004142	Cstf3	100	89.972	Cricetulus_griseus_crigri
ENSLBEG00000002306	cstf3	100	97.207	ENSCSEG00000014283	cstf3	100	97.207	Cynoglossus_semilaevis
ENSLBEG00000002306	cstf3	100	95.531	ENSCVAG00000019739	cstf3	100	95.531	Cyprinodon_variegatus
ENSLBEG00000002306	cstf3	100	93.863	ENSDARG00000018904	cstf3	100	93.863	Danio_rerio
ENSLBEG00000002306	cstf3	99	90.678	ENSDNOG00000007366	CSTF3	99	90.678	Dasypus_novemcinctus
ENSLBEG00000002306	cstf3	99	83.498	ENSDORG00000005898	Cstf3	99	83.498	Dipodomys_ordii
ENSLBEG00000002306	cstf3	98	56.846	FBgn0003559	su(f)	98	56.846	Drosophila_melanogaster
ENSLBEG00000002306	cstf3	90	84.891	ENSETEG00000017097	CSTF3	90	84.891	Echinops_telfairi
ENSLBEG00000002306	cstf3	84	74.295	ENSEBUG00000015459	cstf3	96	74.295	Eptatretus_burgeri
ENSLBEG00000002306	cstf3	98	90.857	ENSEASG00005019884	CSTF3	97	96.018	Equus_asinus_asinus
ENSLBEG00000002306	cstf3	98	90.857	ENSECAG00000023338	CSTF3	97	96.018	Equus_caballus
ENSLBEG00000002306	cstf3	100	85.376	ENSEEUG00000015167	CSTF3	100	85.376	Erinaceus_europaeus
ENSLBEG00000002306	cstf3	100	94.840	ENSELUG00000023393	cstf3	100	94.840	Esox_lucius
ENSLBEG00000002306	cstf3	100	90.251	ENSFCAG00000030711	CSTF3	100	90.251	Felis_catus
ENSLBEG00000002306	cstf3	93	92.900	ENSFALG00000010764	CSTF3	100	89.401	Ficedula_albicollis
ENSLBEG00000002306	cstf3	100	90.251	ENSFDAG00000012082	CSTF3	100	90.251	Fukomys_damarensis
ENSLBEG00000002306	cstf3	100	95.531	ENSFHEG00000020623	cstf3	100	95.531	Fundulus_heteroclitus
ENSLBEG00000002306	cstf3	100	94.429	ENSGMOG00000012275	cstf3	100	94.429	Gadus_morhua
ENSLBEG00000002306	cstf3	100	89.833	ENSGALG00000011685	CSTF3	100	89.833	Gallus_gallus
ENSLBEG00000002306	cstf3	100	95.391	ENSGAFG00000002181	cstf3	100	95.391	Gambusia_affinis
ENSLBEG00000002306	cstf3	100	98.464	ENSGACG00000015997	cstf3	100	98.464	Gasterosteus_aculeatus
ENSLBEG00000002306	cstf3	100	90.251	ENSGAGG00000006200	CSTF3	100	90.251	Gopherus_agassizii
ENSLBEG00000002306	cstf3	99	85.028	ENSGGOG00000026591	CSTF3	96	91.537	Gorilla_gorilla
ENSLBEG00000002306	cstf3	100	96.648	ENSHBUG00000016656	cstf3	100	96.648	Haplochromis_burtoni
ENSLBEG00000002306	cstf3	100	89.972	ENSHGLG00000017834	CSTF3	100	89.972	Heterocephalus_glaber_female
ENSLBEG00000002306	cstf3	100	89.972	ENSHGLG00100018042	CSTF3	100	89.972	Heterocephalus_glaber_male
ENSLBEG00000002306	cstf3	100	93.296	ENSHCOG00000015218	cstf3	100	93.296	Hippocampus_comes
ENSLBEG00000002306	cstf3	100	92.887	ENSIPUG00000013170	CSTF3	100	92.887	Ictalurus_punctatus
ENSLBEG00000002306	cstf3	100	90.111	ENSSTOG00000013306	CSTF3	100	90.111	Ictidomys_tridecemlineatus
ENSLBEG00000002306	cstf3	99	80.905	ENSJJAG00000018430	Cstf3	99	80.505	Jaculus_jaculus
ENSLBEG00000002306	cstf3	100	95.251	ENSKMAG00000010916	cstf3	100	95.251	Kryptolebias_marmoratus
ENSLBEG00000002306	cstf3	100	90.237	ENSLACG00000017296	CSTF3	100	90.237	Latimeria_chalumnae
ENSLBEG00000002306	cstf3	100	93.454	ENSLOCG00000004415	cstf3	100	93.454	Lepisosteus_oculatus
ENSLBEG00000002306	cstf3	99	90.948	ENSLAFG00000008712	CSTF3	99	90.948	Loxodonta_africana
ENSLBEG00000002306	cstf3	100	90.111	ENSMFAG00000029516	CSTF3	100	90.111	Macaca_fascicularis
ENSLBEG00000002306	cstf3	100	90.111	ENSMMUG00000002542	CSTF3	100	90.111	Macaca_mulatta
ENSLBEG00000002306	cstf3	100	90.111	ENSMNEG00000021807	CSTF3	100	90.111	Macaca_nemestrina
ENSLBEG00000002306	cstf3	100	90.111	ENSMLEG00000039594	CSTF3	98	93.792	Mandrillus_leucophaeus
ENSLBEG00000002306	cstf3	100	97.346	ENSMAMG00000020423	cstf3	100	97.346	Mastacembelus_armatus
ENSLBEG00000002306	cstf3	100	96.508	ENSMZEG00005012082	cstf3	100	96.508	Maylandia_zebra
ENSLBEG00000002306	cstf3	100	89.694	ENSMGAG00000001383	CSTF3	100	89.694	Meleagris_gallopavo
ENSLBEG00000002306	cstf3	100	89.833	ENSMAUG00000002487	Cstf3	100	89.833	Mesocricetus_auratus
ENSLBEG00000002306	cstf3	100	89.833	ENSMICG00000004784	CSTF3	100	89.833	Microcebus_murinus
ENSLBEG00000002306	cstf3	100	89.972	ENSMOCG00000017583	Cstf3	100	89.972	Microtus_ochrogaster
ENSLBEG00000002306	cstf3	99	97.881	ENSMMOG00000016026	cstf3	95	97.881	Mola_mola
ENSLBEG00000002306	cstf3	100	79.805	ENSMODG00000025205	-	100	79.805	Monodelphis_domestica
ENSLBEG00000002306	cstf3	100	90.669	ENSMODG00000009745	-	100	90.669	Monodelphis_domestica
ENSLBEG00000002306	cstf3	100	97.346	ENSMALG00000012050	cstf3	100	97.346	Monopterus_albus
ENSLBEG00000002306	cstf3	100	89.972	MGP_CAROLIEiJ_G0024026	Cstf3	100	89.972	Mus_caroli
ENSLBEG00000002306	cstf3	100	89.972	ENSMUSG00000027176	Cstf3	100	89.972	Mus_musculus
ENSLBEG00000002306	cstf3	100	89.972	MGP_PahariEiJ_G0025464	Cstf3	100	89.972	Mus_pahari
ENSLBEG00000002306	cstf3	100	89.972	MGP_SPRETEiJ_G0024939	Cstf3	100	89.972	Mus_spretus
ENSLBEG00000002306	cstf3	100	89.972	ENSMPUG00000011457	CSTF3	100	89.972	Mustela_putorius_furo
ENSLBEG00000002306	cstf3	100	87.604	ENSMLUG00000026022	-	100	87.604	Myotis_lucifugus
ENSLBEG00000002306	cstf3	99	90.819	ENSMLUG00000003073	-	99	90.819	Myotis_lucifugus
ENSLBEG00000002306	cstf3	100	89.833	ENSNGAG00000010677	Cstf3	100	89.833	Nannospalax_galili
ENSLBEG00000002306	cstf3	87	96.950	ENSNBRG00000007345	cstf3	100	96.950	Neolamprologus_brichardi
ENSLBEG00000002306	cstf3	100	90.111	ENSNLEG00000017901	CSTF3	97	93.987	Nomascus_leucogenys
ENSLBEG00000002306	cstf3	73	89.866	ENSMEUG00000005640	-	100	89.866	Notamacropus_eugenii
ENSLBEG00000002306	cstf3	66	95.385	ENSOPRG00000000199	-	66	95.385	Ochotona_princeps
ENSLBEG00000002306	cstf3	89	78.302	ENSODEG00000006311	-	97	78.302	Octodon_degus
ENSLBEG00000002306	cstf3	99	90.948	ENSODEG00000016737	-	99	90.948	Octodon_degus
ENSLBEG00000002306	cstf3	100	96.508	ENSONIG00000005563	cstf3	100	96.508	Oreochromis_niloticus
ENSLBEG00000002306	cstf3	90	89.692	ENSOANG00000015140	CSTF3	100	89.692	Ornithorhynchus_anatinus
ENSLBEG00000002306	cstf3	99	90.665	ENSOCUG00000015417	CSTF3	99	90.665	Oryctolagus_cuniculus
ENSLBEG00000002306	cstf3	100	94.832	ENSORLG00000009762	cstf3	100	94.832	Oryzias_latipes
ENSLBEG00000002306	cstf3	100	94.832	ENSORLG00020005540	cstf3	100	94.832	Oryzias_latipes_hni
ENSLBEG00000002306	cstf3	100	94.693	ENSORLG00015003551	cstf3	100	94.693	Oryzias_latipes_hsok
ENSLBEG00000002306	cstf3	100	95.391	ENSOMEG00000003848	cstf3	100	95.391	Oryzias_melastigma
ENSLBEG00000002306	cstf3	100	89.736	ENSOGAG00000010229	CSTF3	100	89.736	Otolemur_garnettii
ENSLBEG00000002306	cstf3	90	90.202	ENSOARG00000017271	CSTF3	99	90.202	Ovis_aries
ENSLBEG00000002306	cstf3	99	87.429	ENSPPAG00000027358	CSTF3	99	87.429	Pan_paniscus
ENSLBEG00000002306	cstf3	100	90.251	ENSPPRG00000016852	CSTF3	100	90.251	Panthera_pardus
ENSLBEG00000002306	cstf3	100	90.251	ENSPTIG00000008716	CSTF3	100	90.251	Panthera_tigris_altaica
ENSLBEG00000002306	cstf3	100	90.111	ENSPTRG00000003485	CSTF3	100	90.111	Pan_troglodytes
ENSLBEG00000002306	cstf3	100	90.111	ENSPANG00000013722	CSTF3	98	93.792	Papio_anubis
ENSLBEG00000002306	cstf3	100	93.445	ENSPKIG00000023648	cstf3	100	93.445	Paramormyrops_kingsleyae
ENSLBEG00000002306	cstf3	100	90.390	ENSPSIG00000009173	CSTF3	100	90.390	Pelodiscus_sinensis
ENSLBEG00000002306	cstf3	77	98.175	ENSPMGG00000000164	cstf3	99	98.175	Periophthalmus_magnuspinnatus
ENSLBEG00000002306	cstf3	100	89.972	ENSPEMG00000011481	Cstf3	100	89.972	Peromyscus_maniculatus_bairdii
ENSLBEG00000002306	cstf3	99	78.672	ENSPMAG00000007282	cstf3	99	78.762	Petromyzon_marinus
ENSLBEG00000002306	cstf3	99	89.014	ENSPCIG00000026406	-	100	90.560	Phascolarctos_cinereus
ENSLBEG00000002306	cstf3	100	76.217	ENSPCIG00000030419	-	90	76.495	Phascolarctos_cinereus
ENSLBEG00000002306	cstf3	100	95.670	ENSPFOG00000017239	cstf3	100	95.670	Poecilia_formosa
ENSLBEG00000002306	cstf3	100	95.810	ENSPLAG00000009456	cstf3	100	95.810	Poecilia_latipinna
ENSLBEG00000002306	cstf3	100	95.670	ENSPMEG00000010320	cstf3	100	95.670	Poecilia_mexicana
ENSLBEG00000002306	cstf3	100	95.670	ENSPREG00000013549	cstf3	100	95.670	Poecilia_reticulata
ENSLBEG00000002306	cstf3	100	90.111	ENSPPYG00000003375	CSTF3	100	90.111	Pongo_abelii
ENSLBEG00000002306	cstf3	70	95.470	ENSPCAG00000008025	-	70	95.470	Procavia_capensis
ENSLBEG00000002306	cstf3	100	84.819	ENSPCOG00000014417	CSTF3	100	84.819	Propithecus_coquereli
ENSLBEG00000002306	cstf3	100	85.097	ENSPVAG00000002350	CSTF3	100	85.097	Pteropus_vampyrus
ENSLBEG00000002306	cstf3	100	96.648	ENSPNYG00000018259	cstf3	100	96.648	Pundamilia_nyererei
ENSLBEG00000002306	cstf3	100	94.282	ENSPNAG00000020182	cstf3	100	94.282	Pygocentrus_nattereri
ENSLBEG00000002306	cstf3	87	89.600	ENSRNOG00000012089	Cstf3	100	89.600	Rattus_norvegicus
ENSLBEG00000002306	cstf3	99	89.407	ENSRBIG00000044258	CSTF3	100	90.080	Rhinopithecus_bieti
ENSLBEG00000002306	cstf3	100	90.111	ENSRROG00000043450	CSTF3	100	90.111	Rhinopithecus_roxellana
ENSLBEG00000002306	cstf3	100	90.111	ENSSBOG00000024764	CSTF3	98	96.437	Saimiri_boliviensis_boliviensis
ENSLBEG00000002306	cstf3	99	91.243	ENSSHAG00000018128	-	99	91.243	Sarcophilus_harrisii
ENSLBEG00000002306	cstf3	100	81.337	ENSSHAG00000003135	-	99	81.337	Sarcophilus_harrisii
ENSLBEG00000002306	cstf3	100	93.584	ENSSFOG00015022133	cstf3	100	93.584	Scleropages_formosus
ENSLBEG00000002306	cstf3	100	97.067	ENSSMAG00000002197	cstf3	100	97.067	Scophthalmus_maximus
ENSLBEG00000002306	cstf3	100	97.765	ENSSDUG00000020426	cstf3	100	97.765	Seriola_dumerili
ENSLBEG00000002306	cstf3	100	98.045	ENSSLDG00000025649	cstf3	100	98.045	Seriola_lalandi_dorsalis
ENSLBEG00000002306	cstf3	100	89.833	ENSSARG00000000391	CSTF3	100	89.833	Sorex_araneus
ENSLBEG00000002306	cstf3	96	90.738	ENSSPUG00000010546	CSTF3	100	90.738	Sphenodon_punctatus
ENSLBEG00000002306	cstf3	100	98.045	ENSSPAG00000004958	cstf3	100	98.045	Stegastes_partitus
ENSLBEG00000002306	cstf3	100	89.665	ENSSSCG00000040954	CSTF3	100	89.665	Sus_scrofa
ENSLBEG00000002306	cstf3	99	90.523	ENSTGUG00000005010	CSTF3	100	90.395	Taeniopygia_guttata
ENSLBEG00000002306	cstf3	100	96.369	ENSTRUG00000004959	cstf3	100	96.369	Takifugu_rubripes
ENSLBEG00000002306	cstf3	99	96.610	ENSTNIG00000013811	cstf3	99	96.610	Tetraodon_nigroviridis
ENSLBEG00000002306	cstf3	90	87.695	ENSTBEG00000001544	CSTF3	90	87.695	Tupaia_belangeri
ENSLBEG00000002306	cstf3	100	87.326	ENSTTRG00000016366	CSTF3	100	87.326	Tursiops_truncatus
ENSLBEG00000002306	cstf3	99	90.537	ENSUMAG00000018971	CSTF3	100	89.760	Ursus_maritimus
ENSLBEG00000002306	cstf3	100	89.972	ENSVPAG00000007800	CSTF3	100	89.972	Vicugna_pacos
ENSLBEG00000002306	cstf3	99	90.819	ENSVVUG00000014938	CSTF3	100	90.080	Vulpes_vulpes
ENSLBEG00000002306	cstf3	67	41.975	ENSXETG00000017946	-	100	41.975	Xenopus_tropicalis
ENSLBEG00000002306	cstf3	88	74.844	ENSXETG00000021399	cstf3	100	75.890	Xenopus_tropicalis
ENSLBEG00000002306	cstf3	87	95.345	ENSXCOG00000011741	cstf3	100	95.345	Xiphophorus_couchianus
ENSLBEG00000002306	cstf3	100	95.531	ENSXMAG00000009545	cstf3	100	95.531	Xiphophorus_maculatus