EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000002448 (Gene tree)
Gene ID: 109980027
Gene Symbol: -
Alias: -
Full Name: RNA 3'-terminal phosphate cyclase-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 2674 bases
Position: chrFKLU01010388.1:4590-7263
Accession: 109980027
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000003160	RTC	PF01137.21	2.4e-68	1	1
ENSLBEP00000003160	RTC_insert	PF05189.13	3.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000003328	-	966	XM_020628632	ENSLBEP00000003160	321 (aa)	XP_020484288	UPI0009B31708

Gene Model

Click here to download ENSLBEG00000002448's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000002448's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000002448	-	99	99.373	ENSLBEG00000028971	rtca	88	99.373

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000002448	-	99	68.536	ENSG00000137996	RTCA	88	68.536	Homo_sapiens
ENSLBEG00000002448	-	99	86.834	ENSAPOG00000001345	rtca	87	86.834	Acanthochromis_polyacanthus
ENSLBEG00000002448	-	83	70.260	ENSAMEG00000008855	RTCA	100	70.260	Ailuropoda_melanoleuca
ENSLBEG00000002448	-	99	87.147	ENSACIG00000019643	rtca	88	87.147	Amphilophus_citrinellus
ENSLBEG00000002448	-	99	86.520	ENSAOCG00000014979	rtca	87	86.520	Amphiprion_ocellaris
ENSLBEG00000002448	-	99	86.207	ENSAPEG00000006945	rtca	87	86.207	Amphiprion_percula
ENSLBEG00000002448	-	99	88.088	ENSATEG00000006315	rtca	88	88.088	Anabas_testudineus
ENSLBEG00000002448	-	99	66.562	ENSAPLG00000015430	RTCA	91	66.562	Anas_platyrhynchos
ENSLBEG00000002448	-	99	69.159	ENSANAG00000025446	RTCA	88	69.159	Aotus_nancymaae
ENSLBEG00000002448	-	99	87.147	ENSACLG00000020770	rtca	87	87.147	Astatotilapia_calliptera
ENSLBEG00000002448	-	99	78.997	ENSAMXG00000043271	rtca	88	78.997	Astyanax_mexicanus
ENSLBEG00000002448	-	99	69.470	ENSBTAG00000006321	RTCA	88	69.470	Bos_taurus
ENSLBEG00000002448	-	99	68.847	ENSCJAG00000003398	RTCA	88	68.847	Callithrix_jacchus
ENSLBEG00000002448	-	99	68.847	ENSCAFG00000020010	RTCA	59	68.847	Canis_familiaris
ENSLBEG00000002448	-	99	68.847	ENSCAFG00020011528	RTCA	50	68.847	Canis_lupus_dingo
ENSLBEG00000002448	-	99	69.159	ENSCHIG00000018937	RTCA	88	69.159	Capra_hircus
ENSLBEG00000002448	-	99	68.847	ENSTSYG00000011305	RTCA	88	68.847	Carlito_syrichta
ENSLBEG00000002448	-	99	68.536	ENSCCAG00000021844	RTCA	88	68.536	Cebus_capucinus
ENSLBEG00000002448	-	98	69.182	ENSCATG00000019364	RTCA	100	68.608	Cercocebus_atys
ENSLBEG00000002448	-	98	69.304	ENSCLAG00000006125	RTCA	100	69.304	Chinchilla_lanigera
ENSLBEG00000002448	-	99	68.536	ENSCSAG00000001509	RTCA	88	68.536	Chlorocebus_sabaeus
ENSLBEG00000002448	-	99	68.536	ENSCHOG00000005211	RTCA	88	68.536	Choloepus_hoffmanni
ENSLBEG00000002448	-	99	65.625	ENSCPBG00000026658	RTCA	88	65.625	Chrysemys_picta_bellii
ENSLBEG00000002448	-	99	54.062	ENSCING00000007875	-	87	54.062	Ciona_intestinalis
ENSLBEG00000002448	-	99	54.062	ENSCSAVG00000007269	-	87	54.062	Ciona_savignyi
ENSLBEG00000002448	-	99	68.224	ENSCANG00000040106	RTCA	88	68.224	Colobus_angolensis_palliatus
ENSLBEG00000002448	-	83	70.260	ENSCGRG00001013163	Rtca	85	70.260	Cricetulus_griseus_chok1gshd
ENSLBEG00000002448	-	99	81.818	ENSCSEG00000000530	rtca	86	81.818	Cynoglossus_semilaevis
ENSLBEG00000002448	-	71	87.225	ENSCVAG00000021809	rtca	66	87.225	Cyprinodon_variegatus
ENSLBEG00000002448	-	99	78.370	ENSDARG00000002215	rtca	88	78.370	Danio_rerio
ENSLBEG00000002448	-	99	69.782	ENSDNOG00000000456	RTCA	88	69.782	Dasypus_novemcinctus
ENSLBEG00000002448	-	99	70.093	ENSDORG00000005448	Rtca	88	70.093	Dipodomys_ordii
ENSLBEG00000002448	-	98	37.539	FBgn0025630	Rtca	86	37.539	Drosophila_melanogaster
ENSLBEG00000002448	-	93	52.013	ENSEBUG00000008556	rtca	80	52.013	Eptatretus_burgeri
ENSLBEG00000002448	-	99	69.159	ENSEASG00005015926	RTCA	88	69.159	Equus_asinus_asinus
ENSLBEG00000002448	-	99	69.159	ENSECAG00000019831	RTCA	88	69.159	Equus_caballus
ENSLBEG00000002448	-	88	65.141	ENSEEUG00000001165	RTCA	82	65.141	Erinaceus_europaeus
ENSLBEG00000002448	-	99	80.564	ENSELUG00000003741	rtca	88	80.564	Esox_lucius
ENSLBEG00000002448	-	99	69.470	ENSFCAG00000024460	RTCA	88	69.470	Felis_catus
ENSLBEG00000002448	-	91	67.918	ENSFALG00000002443	RTCA	79	67.918	Ficedula_albicollis
ENSLBEG00000002448	-	98	55.521	ENSFDAG00000016084	-	86	55.521	Fukomys_damarensis
ENSLBEG00000002448	-	99	68.224	ENSFDAG00000012070	-	88	68.224	Fukomys_damarensis
ENSLBEG00000002448	-	80	73.930	ENSFHEG00000002868	rtca	92	81.395	Fundulus_heteroclitus
ENSLBEG00000002448	-	99	79.937	ENSGMOG00000013264	rtca	88	79.937	Gadus_morhua
ENSLBEG00000002448	-	99	66.250	ENSGALG00000005277	RTCA	88	66.250	Gallus_gallus
ENSLBEG00000002448	-	99	86.207	ENSGAFG00000011853	rtca	87	86.207	Gambusia_affinis
ENSLBEG00000002448	-	99	87.147	ENSGACG00000013497	rtca	88	87.147	Gasterosteus_aculeatus
ENSLBEG00000002448	-	77	66.129	ENSGAGG00000023306	RTCA	85	66.129	Gopherus_agassizii
ENSLBEG00000002448	-	99	67.913	ENSGGOG00000009546	-	100	67.638	Gorilla_gorilla
ENSLBEG00000002448	-	99	67.290	ENSGGOG00000044018	-	88	67.290	Gorilla_gorilla
ENSLBEG00000002448	-	99	86.834	ENSHBUG00000002114	rtca	87	86.834	Haplochromis_burtoni
ENSLBEG00000002448	-	99	68.224	ENSHGLG00000002617	RTCA	88	68.224	Heterocephalus_glaber_female
ENSLBEG00000002448	-	99	68.224	ENSHGLG00100006056	RTCA	88	68.224	Heterocephalus_glaber_male
ENSLBEG00000002448	-	99	75.862	ENSHCOG00000020628	rtca	78	75.862	Hippocampus_comes
ENSLBEG00000002448	-	99	76.803	ENSIPUG00000024803	rtca	88	76.803	Ictalurus_punctatus
ENSLBEG00000002448	-	98	62.461	ENSSTOG00000033099	-	86	62.461	Ictidomys_tridecemlineatus
ENSLBEG00000002448	-	99	70.219	ENSSTOG00000013528	-	93	70.440	Ictidomys_tridecemlineatus
ENSLBEG00000002448	-	99	50.000	ENSJJAG00000016178	Rtca	85	50.000	Jaculus_jaculus
ENSLBEG00000002448	-	99	86.834	ENSKMAG00000006651	rtca	87	86.834	Kryptolebias_marmoratus
ENSLBEG00000002448	-	99	66.875	ENSLACG00000013666	RTCA	88	66.875	Latimeria_chalumnae
ENSLBEG00000002448	-	99	77.188	ENSLOCG00000000093	rtca	87	77.188	Lepisosteus_oculatus
ENSLBEG00000002448	-	99	68.224	ENSLAFG00000001473	RTCA	88	68.224	Loxodonta_africana
ENSLBEG00000002448	-	99	68.536	ENSMFAG00000034132	RTCA	88	68.536	Macaca_fascicularis
ENSLBEG00000002448	-	99	68.536	ENSMMUG00000019105	RTCA	88	68.536	Macaca_mulatta
ENSLBEG00000002448	-	96	68.285	ENSMNEG00000037163	RTCA	100	68.285	Macaca_nemestrina
ENSLBEG00000002448	-	99	55.140	ENSMLEG00000042151	RTCA	85	55.140	Mandrillus_leucophaeus
ENSLBEG00000002448	-	99	88.088	ENSMAMG00000016536	rtca	88	88.088	Mastacembelus_armatus
ENSLBEG00000002448	-	99	87.147	ENSMZEG00005017945	rtca	87	87.147	Maylandia_zebra
ENSLBEG00000002448	-	99	66.144	ENSMGAG00000006892	RTCA	100	66.144	Meleagris_gallopavo
ENSLBEG00000002448	-	99	70.093	ENSMAUG00000008488	Rtca	88	70.093	Mesocricetus_auratus
ENSLBEG00000002448	-	96	69.256	ENSMICG00000008643	RTCA	100	69.256	Microcebus_murinus
ENSLBEG00000002448	-	99	69.782	ENSMOCG00000016660	Rtca	88	69.782	Microtus_ochrogaster
ENSLBEG00000002448	-	96	89.251	ENSMMOG00000007750	rtca	100	89.251	Mola_mola
ENSLBEG00000002448	-	99	69.782	ENSMODG00000003557	RTCA	88	69.782	Monodelphis_domestica
ENSLBEG00000002448	-	99	87.461	ENSMALG00000020844	rtca	88	87.461	Monopterus_albus
ENSLBEG00000002448	-	99	68.536	MGP_CAROLIEiJ_G0025565	Rtca	100	67.606	Mus_caroli
ENSLBEG00000002448	-	99	68.224	ENSMUSG00000000339	Rtca	100	67.606	Mus_musculus
ENSLBEG00000002448	-	99	68.536	MGP_PahariEiJ_G0027011	Rtca	100	67.606	Mus_pahari
ENSLBEG00000002448	-	99	68.847	MGP_SPRETEiJ_G0026515	Rtca	100	68.310	Mus_spretus
ENSLBEG00000002448	-	99	69.470	ENSMPUG00000012119	RTCA	88	69.470	Mustela_putorius_furo
ENSLBEG00000002448	-	99	66.355	ENSMLUG00000009922	RTCA	88	66.355	Myotis_lucifugus
ENSLBEG00000002448	-	99	68.847	ENSNGAG00000011540	Rtca	92	69.085	Nannospalax_galili
ENSLBEG00000002448	-	99	87.461	ENSNBRG00000003062	rtca	87	87.461	Neolamprologus_brichardi
ENSLBEG00000002448	-	99	68.224	ENSNLEG00000031426	RTCA	88	68.224	Nomascus_leucogenys
ENSLBEG00000002448	-	83	65.428	ENSOPRG00000012092	RTCA	71	65.428	Ochotona_princeps
ENSLBEG00000002448	-	99	69.159	ENSODEG00000006990	RTCA	88	69.159	Octodon_degus
ENSLBEG00000002448	-	99	86.834	ENSONIG00000007753	rtca	87	86.834	Oreochromis_niloticus
ENSLBEG00000002448	-	98	69.716	ENSOANG00000012055	RTCA	98	69.716	Ornithorhynchus_anatinus
ENSLBEG00000002448	-	99	69.159	ENSOCUG00000014247	RTCA	88	69.159	Oryctolagus_cuniculus
ENSLBEG00000002448	-	99	87.461	ENSORLG00000013605	rtca	88	87.461	Oryzias_latipes
ENSLBEG00000002448	-	99	87.774	ENSORLG00020001904	rtca	88	87.774	Oryzias_latipes_hni
ENSLBEG00000002448	-	99	87.774	ENSORLG00015021064	rtca	88	87.774	Oryzias_latipes_hsok
ENSLBEG00000002448	-	99	85.580	ENSOMEG00000000756	rtca	88	85.580	Oryzias_melastigma
ENSLBEG00000002448	-	94	64.918	ENSOGAG00000005627	RTCA	84	64.918	Otolemur_garnettii
ENSLBEG00000002448	-	98	69.182	ENSOARG00000018122	RTCA	100	69.182	Ovis_aries
ENSLBEG00000002448	-	98	68.239	ENSPPAG00000035119	RTCA	100	67.638	Pan_paniscus
ENSLBEG00000002448	-	99	69.782	ENSPPRG00000000350	RTCA	88	69.782	Panthera_pardus
ENSLBEG00000002448	-	99	69.159	ENSPTIG00000012816	RTCA	88	69.159	Panthera_tigris_altaica
ENSLBEG00000002448	-	98	68.239	ENSPTRG00000001004	RTCA	100	67.638	Pan_troglodytes
ENSLBEG00000002448	-	99	68.536	ENSPANG00000000346	RTCA	88	68.536	Papio_anubis
ENSLBEG00000002448	-	99	80.878	ENSPKIG00000001653	rtca	88	80.878	Paramormyrops_kingsleyae
ENSLBEG00000002448	-	99	65.000	ENSPSIG00000011408	RTCA	88	65.000	Pelodiscus_sinensis
ENSLBEG00000002448	-	99	69.782	ENSPEMG00000018582	Rtca	88	69.782	Peromyscus_maniculatus_bairdii
ENSLBEG00000002448	-	99	53.894	ENSPMAG00000009110	rtca	88	53.894	Petromyzon_marinus
ENSLBEG00000002448	-	99	70.093	ENSPCIG00000007684	RTCA	88	70.093	Phascolarctos_cinereus
ENSLBEG00000002448	-	98	86.709	ENSPFOG00000004824	rtca	87	86.709	Poecilia_formosa
ENSLBEG00000002448	-	99	86.207	ENSPLAG00000011753	rtca	87	86.207	Poecilia_latipinna
ENSLBEG00000002448	-	99	86.207	ENSPMEG00000020469	rtca	87	86.207	Poecilia_mexicana
ENSLBEG00000002448	-	99	84.953	ENSPREG00000001365	rtca	87	84.953	Poecilia_reticulata
ENSLBEG00000002448	-	99	68.536	ENSPPYG00000001115	RTCA	88	68.536	Pongo_abelii
ENSLBEG00000002448	-	99	65.421	ENSPCAG00000005076	RTCA	88	65.421	Procavia_capensis
ENSLBEG00000002448	-	99	69.470	ENSPCOG00000005603	RTCA	88	69.470	Propithecus_coquereli
ENSLBEG00000002448	-	98	68.770	ENSPVAG00000009478	RTCA	84	68.770	Pteropus_vampyrus
ENSLBEG00000002448	-	99	87.147	ENSPNYG00000004722	rtca	87	87.147	Pundamilia_nyererei
ENSLBEG00000002448	-	99	78.683	ENSPNAG00000022270	rtca	88	78.683	Pygocentrus_nattereri
ENSLBEG00000002448	-	99	68.224	ENSRNOG00000014575	Rtca	88	68.224	Rattus_norvegicus
ENSLBEG00000002448	-	98	68.239	ENSRBIG00000041180	RTCA	100	67.638	Rhinopithecus_bieti
ENSLBEG00000002448	-	99	67.913	ENSRROG00000024929	RTCA	88	67.913	Rhinopithecus_roxellana
ENSLBEG00000002448	-	99	68.847	ENSSBOG00000028626	RTCA	88	68.847	Saimiri_boliviensis_boliviensis
ENSLBEG00000002448	-	99	69.782	ENSSHAG00000001758	RTCA	88	69.782	Sarcophilus_harrisii
ENSLBEG00000002448	-	99	87.461	ENSSMAG00000014680	rtca	86	87.461	Scophthalmus_maximus
ENSLBEG00000002448	-	99	89.342	ENSSDUG00000015585	rtca	86	89.342	Seriola_dumerili
ENSLBEG00000002448	-	99	89.655	ENSSLDG00000018985	rtca	87	89.655	Seriola_lalandi_dorsalis
ENSLBEG00000002448	-	98	64.984	ENSSARG00000013993	RTCA	100	64.984	Sorex_araneus
ENSLBEG00000002448	-	99	87.147	ENSSPAG00000011938	rtca	87	87.147	Stegastes_partitus
ENSLBEG00000002448	-	99	69.470	ENSSSCG00000006865	RTCA	88	69.470	Sus_scrofa
ENSLBEG00000002448	-	99	67.500	ENSTGUG00000005154	RTCA	88	67.500	Taeniopygia_guttata
ENSLBEG00000002448	-	99	88.401	ENSTRUG00000008799	rtca	88	88.401	Takifugu_rubripes
ENSLBEG00000002448	-	99	87.147	ENSTNIG00000004725	rtca	88	87.147	Tetraodon_nigroviridis
ENSLBEG00000002448	-	52	62.500	ENSTBEG00000000943	RTCA	65	51.261	Tupaia_belangeri
ENSLBEG00000002448	-	98	69.401	ENSTTRG00000015327	RTCA	84	69.401	Tursiops_truncatus
ENSLBEG00000002448	-	93	68.792	ENSUAMG00000017265	RTCA	84	68.792	Ursus_americanus
ENSLBEG00000002448	-	99	68.847	ENSUMAG00000007881	RTCA	88	68.847	Ursus_maritimus
ENSLBEG00000002448	-	98	61.514	ENSVPAG00000001039	RTCA	84	61.514	Vicugna_pacos
ENSLBEG00000002448	-	99	68.847	ENSVVUG00000022041	RTCA	59	68.847	Vulpes_vulpes
ENSLBEG00000002448	-	98	57.321	ENSXETG00000031661	RTCA	90	55.172	Xenopus_tropicalis
ENSLBEG00000002448	-	99	72.727	ENSXCOG00000008002	rtca	87	72.727	Xiphophorus_couchianus
ENSLBEG00000002448	-	99	85.893	ENSXMAG00000005482	rtca	87	85.893	Xiphophorus_maculatus