EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000002522 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 4380 bases
Position: chrFKLU01007399.1:7522-11901
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000003276	G-patch	PF01585.23	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000003448	-	1602	-	ENSLBEP00000003276	533 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000002522's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000002522's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000002522	-	83	68.070	ENSLBEG00000020858	rbm5	62	64.038
ENSLBEG00000002522	-	100	68.259	ENSLBEG00000010877	-	58	95.380

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000002522	-	94	50.254	ENSG00000003756	RBM5	58	61.184	Homo_sapiens
ENSLBEG00000002522	-	84	68.421	ENSAPOG00000016625	rbm5	57	65.385	Acanthochromis_polyacanthus
ENSLBEG00000002522	-	100	60.788	ENSAPOG00000006011	-	77	60.788	Acanthochromis_polyacanthus
ENSLBEG00000002522	-	78	64.583	ENSAMEG00000012005	RBM5	58	61.842	Ailuropoda_melanoleuca
ENSLBEG00000002522	-	95	78.369	ENSACIG00000021310	-	77	55.628	Amphilophus_citrinellus
ENSLBEG00000002522	-	93	56.874	ENSACIG00000007571	rbm5	97	58.700	Amphilophus_citrinellus
ENSLBEG00000002522	-	100	59.024	ENSAOCG00000017312	-	57	77.152	Amphiprion_ocellaris
ENSLBEG00000002522	-	84	68.662	ENSAOCG00000002880	rbm5	57	65.595	Amphiprion_ocellaris
ENSLBEG00000002522	-	100	58.462	ENSAPEG00000018222	RBM5	77	58.469	Amphiprion_percula
ENSLBEG00000002522	-	84	68.662	ENSAPEG00000011862	rbm5	58	65.595	Amphiprion_percula
ENSLBEG00000002522	-	84	83.333	ENSATEG00000003838	-	59	79.365	Anabas_testudineus
ENSLBEG00000002522	-	88	67.820	ENSATEG00000024663	rbm5	75	52.508	Anabas_testudineus
ENSLBEG00000002522	-	77	66.667	ENSAPLG00000011176	RBM5	77	51.356	Anas_platyrhynchos
ENSLBEG00000002522	-	94	51.107	ENSACAG00000008580	RBM5	75	50.478	Anolis_carolinensis
ENSLBEG00000002522	-	94	50.761	ENSANAG00000025199	RBM5	57	63.946	Aotus_nancymaae
ENSLBEG00000002522	-	83	95.122	ENSACLG00000024198	RBM5	72	95.122	Astatotilapia_calliptera
ENSLBEG00000002522	-	84	65.614	ENSACLG00000012748	rbm5	58	63.782	Astatotilapia_calliptera
ENSLBEG00000002522	-	84	71.071	ENSAMXG00000008146	rbm5	67	69.103	Astyanax_mexicanus
ENSLBEG00000002522	-	78	64.583	ENSBTAG00000006330	RBM5	56	61.842	Bos_taurus
ENSLBEG00000002522	-	94	50.592	ENSCJAG00000004740	RBM5	58	61.184	Callithrix_jacchus
ENSLBEG00000002522	-	78	64.583	ENSCAFG00000010866	RBM5	58	61.842	Canis_familiaris
ENSLBEG00000002522	-	78	64.583	ENSCAFG00020022126	RBM5	58	61.842	Canis_lupus_dingo
ENSLBEG00000002522	-	78	64.583	ENSCHIG00000018435	RBM5	56	61.889	Capra_hircus
ENSLBEG00000002522	-	94	47.858	ENSCAPG00000013495	RBM5	71	48.127	Cavia_aperea
ENSLBEG00000002522	-	94	50.678	ENSCPOG00000008151	RBM5	72	50.764	Cavia_porcellus
ENSLBEG00000002522	-	94	50.592	ENSCCAG00000026401	RBM5	58	61.842	Cebus_capucinus
ENSLBEG00000002522	-	94	50.592	ENSCATG00000041038	RBM5	58	61.184	Cercocebus_atys
ENSLBEG00000002522	-	94	50.085	ENSCLAG00000007873	RBM5	72	50.424	Chinchilla_lanigera
ENSLBEG00000002522	-	94	50.592	ENSCSAG00000014401	RBM5	58	61.184	Chlorocebus_sabaeus
ENSLBEG00000002522	-	85	44.322	ENSCHOG00000009429	RBM5	55	63.830	Choloepus_hoffmanni
ENSLBEG00000002522	-	77	66.667	ENSCPBG00000002406	RBM5	75	50.000	Chrysemys_picta_bellii
ENSLBEG00000002522	-	93	50.683	ENSCANG00000031250	RBM5	58	63.380	Colobus_angolensis_palliatus
ENSLBEG00000002522	-	94	50.761	ENSCGRG00001010543	Rbm5	59	62.500	Cricetulus_griseus_chok1gshd
ENSLBEG00000002522	-	94	50.761	ENSCGRG00000008475	Rbm5	59	62.500	Cricetulus_griseus_crigri
ENSLBEG00000002522	-	85	65.580	ENSCSEG00000000596	rbm5	57	63.245	Cynoglossus_semilaevis
ENSLBEG00000002522	-	83	65.517	ENSCVAG00000005655	rbm5	72	54.130	Cyprinodon_variegatus
ENSLBEG00000002522	-	95	59.524	ENSDARG00000098280	rbm5	66	51.464	Danio_rerio
ENSLBEG00000002522	-	78	64.583	ENSDNOG00000011756	RBM5	58	61.842	Dasypus_novemcinctus
ENSLBEG00000002522	-	94	50.423	ENSDORG00000007692	Rbm5	60	61.842	Dipodomys_ordii
ENSLBEG00000002522	-	77	65.942	ENSETEG00000012773	RBM5	56	65.248	Echinops_telfairi
ENSLBEG00000002522	-	94	43.345	ENSEBUG00000017034	rbm5	71	44.043	Eptatretus_burgeri
ENSLBEG00000002522	-	94	50.592	ENSEASG00005011835	RBM5	58	61.842	Equus_asinus_asinus
ENSLBEG00000002522	-	94	50.592	ENSECAG00000020447	RBM5	58	61.842	Equus_caballus
ENSLBEG00000002522	-	90	66.887	ENSELUG00000022467	rbm5	61	64.062	Esox_lucius
ENSLBEG00000002522	-	94	50.085	ENSFCAG00000014639	RBM5	58	61.842	Felis_catus
ENSLBEG00000002522	-	77	66.667	ENSFALG00000008828	RBM5	69	49.444	Ficedula_albicollis
ENSLBEG00000002522	-	94	51.742	ENSFDAG00000001897	RBM5	72	52.439	Fukomys_damarensis
ENSLBEG00000002522	-	87	82.927	ENSFHEG00000015954	rbm5	72	82.927	Fundulus_heteroclitus
ENSLBEG00000002522	-	77	65.147	ENSGMOG00000007810	-	65	53.891	Gadus_morhua
ENSLBEG00000002522	-	94	55.245	ENSGMOG00000016224	rbm5	71	56.863	Gadus_morhua
ENSLBEG00000002522	-	77	66.667	ENSGALG00000039288	RBM5	68	50.396	Gallus_gallus
ENSLBEG00000002522	-	100	52.357	ENSGAFG00000010690	rbm5	75	53.952	Gambusia_affinis
ENSLBEG00000002522	-	100	57.820	ENSGACG00000000858	-	100	58.812	Gasterosteus_aculeatus
ENSLBEG00000002522	-	95	54.090	ENSGACG00000010469	rbm5	76	53.006	Gasterosteus_aculeatus
ENSLBEG00000002522	-	70	66.667	ENSGAGG00000007935	RBM5	74	49.239	Gopherus_agassizii
ENSLBEG00000002522	-	94	50.592	ENSGGOG00000014490	RBM5	58	61.184	Gorilla_gorilla
ENSLBEG00000002522	-	100	73.397	ENSHBUG00000011901	-	68	95.122	Haplochromis_burtoni
ENSLBEG00000002522	-	84	65.614	ENSHBUG00000001941	rbm5	57	63.141	Haplochromis_burtoni
ENSLBEG00000002522	-	94	50.508	ENSHGLG00000014844	RBM5	68	59.816	Heterocephalus_glaber_female
ENSLBEG00000002522	-	94	50.678	ENSHGLG00100010739	RBM5	68	60.123	Heterocephalus_glaber_male
ENSLBEG00000002522	-	92	47.525	ENSHCOG00000017110	rbm5	74	48.099	Hippocampus_comes
ENSLBEG00000002522	-	100	48.971	ENSHCOG00000004536	-	78	50.221	Hippocampus_comes
ENSLBEG00000002522	-	83	70.504	ENSIPUG00000000640	rbm5	57	69.205	Ictalurus_punctatus
ENSLBEG00000002522	-	94	49.408	ENSSTOG00000013856	RBM5	59	61.842	Ictidomys_tridecemlineatus
ENSLBEG00000002522	-	94	51.641	ENSJJAG00000008844	Rbm5	72	52.332	Jaculus_jaculus
ENSLBEG00000002522	-	84	66.667	ENSKMAG00000006663	rbm5	58	63.782	Kryptolebias_marmoratus
ENSLBEG00000002522	-	91	55.679	ENSLACG00000016572	RBM5	72	60.123	Latimeria_chalumnae
ENSLBEG00000002522	-	79	68.919	ENSLOCG00000010774	rbm5	57	64.309	Lepisosteus_oculatus
ENSLBEG00000002522	-	94	50.507	ENSLAFG00000006733	RBM5	58	61.842	Loxodonta_africana
ENSLBEG00000002522	-	94	50.592	ENSMFAG00000031609	RBM5	58	61.184	Macaca_fascicularis
ENSLBEG00000002522	-	94	50.592	ENSMMUG00000004921	RBM5	58	61.184	Macaca_mulatta
ENSLBEG00000002522	-	94	50.592	ENSMNEG00000044394	RBM5	58	61.184	Macaca_nemestrina
ENSLBEG00000002522	-	94	53.381	ENSMLEG00000034689	RBM5	72	53.484	Mandrillus_leucophaeus
ENSLBEG00000002522	-	91	75.786	ENSMAMG00000023948	-	76	61.880	Mastacembelus_armatus
ENSLBEG00000002522	-	87	80.488	ENSMAMG00000017277	rbm5	71	80.488	Mastacembelus_armatus
ENSLBEG00000002522	-	84	65.614	ENSMZEG00005015328	rbm5	58	63.782	Maylandia_zebra
ENSLBEG00000002522	-	98	77.305	ENSMZEG00005010035	-	68	73.616	Maylandia_zebra
ENSLBEG00000002522	-	77	66.667	ENSMGAG00000003972	RBM5	78	51.356	Meleagris_gallopavo
ENSLBEG00000002522	-	94	50.592	ENSMAUG00000020572	Rbm5	57	62.500	Mesocricetus_auratus
ENSLBEG00000002522	-	94	50.761	ENSMICG00000016179	RBM5	58	61.842	Microcebus_murinus
ENSLBEG00000002522	-	94	50.931	ENSMOCG00000017479	Rbm5	58	62.500	Microtus_ochrogaster
ENSLBEG00000002522	-	100	50.741	ENSMMOG00000015342	rbm5	73	50.906	Mola_mola
ENSLBEG00000002522	-	93	55.091	ENSMMOG00000021804	-	70	56.514	Mola_mola
ENSLBEG00000002522	-	78	65.000	ENSMODG00000012301	RBM5	64	61.842	Monodelphis_domestica
ENSLBEG00000002522	-	100	50.500	ENSMALG00000000609	rbm5	75	51.586	Monopterus_albus
ENSLBEG00000002522	-	100	57.935	ENSMALG00000016769	-	59	76.774	Monopterus_albus
ENSLBEG00000002522	-	94	50.253	MGP_CAROLIEiJ_G0032660	Rbm5	96	66.216	Mus_caroli
ENSLBEG00000002522	-	94	50.253	ENSMUSG00000032580	Rbm5	95	66.216	Mus_musculus
ENSLBEG00000002522	-	94	50.253	MGP_PahariEiJ_G0015528	Rbm5	95	66.447	Mus_pahari
ENSLBEG00000002522	-	94	50.253	MGP_SPRETEiJ_G0033805	Rbm5	96	66.216	Mus_spretus
ENSLBEG00000002522	-	78	64.413	ENSMLUG00000007875	RBM5	58	61.184	Myotis_lucifugus
ENSLBEG00000002522	-	94	50.085	ENSNGAG00000011777	Rbm5	57	65.942	Nannospalax_galili
ENSLBEG00000002522	-	93	58.261	ENSNBRG00000004400	RBM5	78	56.402	Neolamprologus_brichardi
ENSLBEG00000002522	-	84	65.614	ENSNBRG00000018097	rbm5	57	63.141	Neolamprologus_brichardi
ENSLBEG00000002522	-	94	50.592	ENSNLEG00000006943	RBM5	58	61.842	Nomascus_leucogenys
ENSLBEG00000002522	-	78	65.000	ENSMEUG00000012994	RBM5	65	61.842	Notamacropus_eugenii
ENSLBEG00000002522	-	94	51.100	ENSOPRG00000015154	RBM5	58	62.500	Ochotona_princeps
ENSLBEG00000002522	-	94	49.066	ENSODEG00000019111	-	73	49.406	Octodon_degus
ENSLBEG00000002522	-	94	50.764	ENSODEG00000016254	-	59	61.842	Octodon_degus
ENSLBEG00000002522	-	95	78.369	ENSONIG00000019007	RBM5	68	74.919	Oreochromis_niloticus
ENSLBEG00000002522	-	84	66.316	ENSONIG00000004107	rbm5	57	63.782	Oreochromis_niloticus
ENSLBEG00000002522	-	94	50.508	ENSOANG00000006557	RBM5	66	63.946	Ornithorhynchus_anatinus
ENSLBEG00000002522	-	94	50.931	ENSOCUG00000011652	RBM5	72	62.500	Oryctolagus_cuniculus
ENSLBEG00000002522	-	77	63.265	ENSORLG00000003369	rbm5	55	60.150	Oryzias_latipes
ENSLBEG00000002522	-	86	66.993	ENSORLG00000001053	-	57	66.993	Oryzias_latipes
ENSLBEG00000002522	-	80	64.444	ENSORLG00020006782	-	54	64.444	Oryzias_latipes_hni
ENSLBEG00000002522	-	84	65.493	ENSORLG00020021744	rbm5	57	62.623	Oryzias_latipes_hni
ENSLBEG00000002522	-	87	80.488	ENSORLG00015018379	rbm5	71	80.488	Oryzias_latipes_hsok
ENSLBEG00000002522	-	91	50.000	ENSORLG00015002854	-	55	64.444	Oryzias_latipes_hsok
ENSLBEG00000002522	-	95	51.526	ENSOMEG00000010653	-	87	51.934	Oryzias_melastigma
ENSLBEG00000002522	-	100	50.575	ENSOMEG00000002219	rbm5	75	51.987	Oryzias_melastigma
ENSLBEG00000002522	-	94	50.514	ENSOGAG00000004205	RBM5	78	49.658	Otolemur_garnettii
ENSLBEG00000002522	-	78	64.583	ENSOARG00000010923	RBM5	56	61.889	Ovis_aries
ENSLBEG00000002522	-	94	50.592	ENSPPAG00000043010	RBM5	57	62.838	Pan_paniscus
ENSLBEG00000002522	-	94	50.085	ENSPPRG00000005404	RBM5	58	61.842	Panthera_pardus
ENSLBEG00000002522	-	94	50.085	ENSPTIG00000000962	RBM5	58	61.842	Panthera_tigris_altaica
ENSLBEG00000002522	-	94	50.592	ENSPTRG00000014946	RBM5	57	62.838	Pan_troglodytes
ENSLBEG00000002522	-	94	50.592	ENSPANG00000018507	RBM5	58	61.184	Papio_anubis
ENSLBEG00000002522	-	85	66.781	ENSPKIG00000024837	RBM5	58	64.577	Paramormyrops_kingsleyae
ENSLBEG00000002522	-	93	48.376	ENSPKIG00000019187	-	97	48.877	Paramormyrops_kingsleyae
ENSLBEG00000002522	-	83	65.357	ENSPSIG00000016073	RBM5	87	50.718	Pelodiscus_sinensis
ENSLBEG00000002522	-	76	90.000	ENSPMGG00000004719	-	65	90.244	Periophthalmus_magnuspinnatus
ENSLBEG00000002522	-	93	50.624	ENSPMGG00000017347	rbm5	92	51.607	Periophthalmus_magnuspinnatus
ENSLBEG00000002522	-	74	56.055	ENSPMAG00000001998	rbm5	50	53.172	Petromyzon_marinus
ENSLBEG00000002522	-	78	65.000	ENSPCIG00000021531	RBM5	64	61.184	Phascolarctos_cinereus
ENSLBEG00000002522	-	84	67.014	ENSPLAG00000006318	rbm5	57	64.194	Poecilia_latipinna
ENSLBEG00000002522	-	96	52.094	ENSPMEG00000008651	rbm5	99	53.523	Poecilia_mexicana
ENSLBEG00000002522	-	84	67.361	ENSPMEG00000004295	rbm5	57	64.516	Poecilia_mexicana
ENSLBEG00000002522	-	84	67.014	ENSPREG00000003795	rbm5	57	63.871	Poecilia_reticulata
ENSLBEG00000002522	-	94	50.931	ENSPCOG00000025840	RBM5	60	61.333	Propithecus_coquereli
ENSLBEG00000002522	-	78	63.571	ENSPVAG00000006812	RBM5	58	59.509	Pteropus_vampyrus
ENSLBEG00000002522	-	98	77.660	ENSPNYG00000006361	RBM5	80	74.267	Pundamilia_nyererei
ENSLBEG00000002522	-	84	65.614	ENSPNYG00000014787	rbm5	57	63.141	Pundamilia_nyererei
ENSLBEG00000002522	-	100	50.153	ENSPNAG00000012070	rbm5	57	68.543	Pygocentrus_nattereri
ENSLBEG00000002522	-	94	50.337	ENSRNOG00000018153	Rbm5	58	62.500	Rattus_norvegicus
ENSLBEG00000002522	-	94	50.931	ENSRBIG00000012679	RBM5	57	63.265	Rhinopithecus_bieti
ENSLBEG00000002522	-	94	52.513	ENSRROG00000041331	RBM5	72	53.206	Rhinopithecus_roxellana
ENSLBEG00000002522	-	94	50.592	ENSSBOG00000006324	RBM5	58	61.184	Saimiri_boliviensis_boliviensis
ENSLBEG00000002522	-	94	50.423	ENSSHAG00000018260	RBM5	64	61.184	Sarcophilus_harrisii
ENSLBEG00000002522	-	98	70.463	ENSSFOG00015019052	rbm5	63	67.541	Scleropages_formosus
ENSLBEG00000002522	-	88	66.312	ENSSFOG00015019645	-	72	55.674	Scleropages_formosus
ENSLBEG00000002522	-	84	67.483	ENSSMAG00000017106	rbm5	58	64.952	Scophthalmus_maximus
ENSLBEG00000002522	-	85	68.166	ENSSDUG00000019775	rbm5	56	67.000	Seriola_dumerili
ENSLBEG00000002522	-	84	67.719	ENSSLDG00000002329	rbm5	56	66.777	Seriola_lalandi_dorsalis
ENSLBEG00000002522	-	84	83.214	ENSSLDG00000015996	-	59	78.549	Seriola_lalandi_dorsalis
ENSLBEG00000002522	-	81	66.429	ENSSPUG00000001876	RBM5	70	50.637	Sphenodon_punctatus
ENSLBEG00000002522	-	98	81.071	ENSSPAG00000020011	-	59	75.862	Stegastes_partitus
ENSLBEG00000002522	-	84	67.719	ENSSPAG00000019638	rbm5	58	63.722	Stegastes_partitus
ENSLBEG00000002522	-	81	70.732	ENSSSCG00000011395	RBM5	52	70.732	Sus_scrofa
ENSLBEG00000002522	-	66	66.667	ENSTGUG00000006417	RBM5	76	46.180	Taeniopygia_guttata
ENSLBEG00000002522	-	85	68.310	ENSTRUG00000008292	rbm5	70	57.974	Takifugu_rubripes
ENSLBEG00000002522	-	78	64.045	ENSTNIG00000014742	rbm5	54	61.049	Tetraodon_nigroviridis
ENSLBEG00000002522	-	78	63.889	ENSTBEG00000005424	RBM5	63	57.362	Tupaia_belangeri
ENSLBEG00000002522	-	78	64.583	ENSTTRG00000007717	RBM5	57	61.842	Tursiops_truncatus
ENSLBEG00000002522	-	78	64.583	ENSUAMG00000028347	RBM5	58	61.842	Ursus_americanus
ENSLBEG00000002522	-	78	64.583	ENSUMAG00000022027	RBM5	58	61.842	Ursus_maritimus
ENSLBEG00000002522	-	60	60.563	ENSVPAG00000009388	RBM5	52	58.000	Vicugna_pacos
ENSLBEG00000002522	-	78	64.583	ENSVVUG00000028647	RBM5	58	61.842	Vulpes_vulpes
ENSLBEG00000002522	-	84	67.361	ENSXMAG00000016369	rbm5	57	64.194	Xiphophorus_maculatus