EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000002556 (Gene tree)
Gene ID: 109992885
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 45-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 6641 bases
Position: chrFKLU01000243.1:567486-574126
Accession: 109992885
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000003362	RRM_1	PF00076.22	3e-50	1	4
ENSLBEP00000003362	RRM_1	PF00076.22	3e-50	2	4
ENSLBEP00000003362	RRM_1	PF00076.22	3e-50	3	4
ENSLBEP00000003362	RRM_1	PF00076.22	3e-50	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000003534	-	1362	XM_020645658	ENSLBEP00000003362	453 (aa)	XP_020501314	-

Gene Model

Click here to download ENSLBEG00000002556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000002556's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000002556	-	96	33.333	ENSLBEG00000013654	pabpc4	60	33.333
ENSLBEG00000002556	-	62	34.091	ENSLBEG00000027924	ELAVL2	85	34.091
ENSLBEG00000002556	-	99	99.557	ENSLBEG00000011642	rbm45	98	99.557

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000002556	-	99	58.901	ENSG00000155636	RBM45	99	60.000	Homo_sapiens
ENSLBEG00000002556	-	99	86.275	ENSAPOG00000009219	rbm45	97	86.275	Acanthochromis_polyacanthus
ENSLBEG00000002556	-	99	57.987	ENSAMEG00000000896	RBM45	95	57.987	Ailuropoda_melanoleuca
ENSLBEG00000002556	-	99	83.370	ENSACIG00000009234	rbm45	97	83.370	Amphilophus_citrinellus
ENSLBEG00000002556	-	99	86.087	ENSAOCG00000007638	rbm45	97	86.087	Amphiprion_ocellaris
ENSLBEG00000002556	-	99	86.275	ENSAPEG00000014352	rbm45	97	86.275	Amphiprion_percula
ENSLBEG00000002556	-	99	87.111	ENSATEG00000016948	rbm45	97	87.111	Anabas_testudineus
ENSLBEG00000002556	-	96	54.450	ENSAPLG00000011049	RBM45	99	54.450	Anas_platyrhynchos
ENSLBEG00000002556	-	99	58.901	ENSANAG00000034660	RBM45	95	58.901	Aotus_nancymaae
ENSLBEG00000002556	-	99	83.407	ENSACLG00000027201	-	97	83.407	Astatotilapia_calliptera
ENSLBEG00000002556	-	99	82.080	ENSACLG00000027286	rbm45	97	82.080	Astatotilapia_calliptera
ENSLBEG00000002556	-	99	71.302	ENSAMXG00000007463	rbm45	97	71.302	Astyanax_mexicanus
ENSLBEG00000002556	-	99	58.462	ENSBTAG00000006168	RBM45	95	58.462	Bos_taurus
ENSLBEG00000002556	-	99	65.942	ENSCJAG00000021516	RBM45	94	65.942	Callithrix_jacchus
ENSLBEG00000002556	-	99	57.634	ENSCAFG00000013640	RBM45	95	57.634	Canis_familiaris
ENSLBEG00000002556	-	99	57.768	ENSCAFG00020007013	RBM45	95	57.768	Canis_lupus_dingo
ENSLBEG00000002556	-	99	58.462	ENSCHIG00000010687	RBM45	95	58.462	Capra_hircus
ENSLBEG00000002556	-	99	58.901	ENSTSYG00000007757	RBM45	95	58.901	Carlito_syrichta
ENSLBEG00000002556	-	95	51.724	ENSCAPG00000009388	RBM45	92	51.706	Cavia_aperea
ENSLBEG00000002556	-	99	57.330	ENSCPOG00000000684	RBM45	94	57.330	Cavia_porcellus
ENSLBEG00000002556	-	99	59.341	ENSCCAG00000022783	RBM45	95	59.341	Cebus_capucinus
ENSLBEG00000002556	-	99	59.121	ENSCATG00000041082	RBM45	95	59.121	Cercocebus_atys
ENSLBEG00000002556	-	99	57.857	ENSCLAG00000015215	RBM45	93	57.857	Chinchilla_lanigera
ENSLBEG00000002556	-	99	59.121	ENSCSAG00000014231	RBM45	95	59.121	Chlorocebus_sabaeus
ENSLBEG00000002556	-	99	58.621	ENSCHOG00000009809	RBM45	99	58.621	Choloepus_hoffmanni
ENSLBEG00000002556	-	99	53.712	ENSCPBG00000003246	RBM45	96	53.930	Chrysemys_picta_bellii
ENSLBEG00000002556	-	99	59.121	ENSCANG00000040777	RBM45	95	59.121	Colobus_angolensis_palliatus
ENSLBEG00000002556	-	99	57.549	ENSCGRG00001005759	Rbm45	95	57.549	Cricetulus_griseus_chok1gshd
ENSLBEG00000002556	-	99	57.549	ENSCGRG00000010816	Rbm45	95	57.549	Cricetulus_griseus_crigri
ENSLBEG00000002556	-	99	75.385	ENSCSEG00000017409	rbm45	97	75.385	Cynoglossus_semilaevis
ENSLBEG00000002556	-	99	72.247	ENSCVAG00000016127	rbm45	99	72.247	Cyprinodon_variegatus
ENSLBEG00000002556	-	99	69.095	ENSDARG00000063731	rbm45	99	73.684	Danio_rerio
ENSLBEG00000002556	-	99	58.462	ENSDNOG00000001973	RBM45	95	58.462	Dasypus_novemcinctus
ENSLBEG00000002556	-	99	59.341	ENSDORG00000015831	Rbm45	95	59.341	Dipodomys_ordii
ENSLBEG00000002556	-	97	35.106	FBgn0035526	CG1316	93	34.105	Drosophila_melanogaster
ENSLBEG00000002556	-	99	52.527	ENSETEG00000013424	RBM45	95	52.527	Echinops_telfairi
ENSLBEG00000002556	-	99	47.556	ENSEBUG00000007042	rbm45	95	47.778	Eptatretus_burgeri
ENSLBEG00000002556	-	99	57.987	ENSEASG00005022475	RBM45	95	57.987	Equus_asinus_asinus
ENSLBEG00000002556	-	99	57.987	ENSECAG00000017129	RBM45	95	57.987	Equus_caballus
ENSLBEG00000002556	-	51	56.034	ENSEEUG00000001843	RBM45	92	56.034	Erinaceus_europaeus
ENSLBEG00000002556	-	99	76.044	ENSELUG00000020878	-	97	76.044	Esox_lucius
ENSLBEG00000002556	-	99	70.419	ENSELUG00000023238	rbm45	98	70.419	Esox_lucius
ENSLBEG00000002556	-	99	58.242	ENSFCAG00000018793	RBM45	95	58.242	Felis_catus
ENSLBEG00000002556	-	96	55.526	ENSFALG00000003330	RBM45	99	55.526	Ficedula_albicollis
ENSLBEG00000002556	-	99	58.462	ENSFDAG00000006840	-	95	58.462	Fukomys_damarensis
ENSLBEG00000002556	-	99	70.133	ENSFHEG00000012844	rbm45	85	70.133	Fundulus_heteroclitus
ENSLBEG00000002556	-	99	75.000	ENSGMOG00000002427	rbm45	96	75.055	Gadus_morhua
ENSLBEG00000002556	-	99	54.902	ENSGALG00000009202	RBM45	90	55.022	Gallus_gallus
ENSLBEG00000002556	-	99	79.333	ENSGAFG00000003709	rbm45	99	79.333	Gambusia_affinis
ENSLBEG00000002556	-	99	82.198	ENSGACG00000011659	rbm45	99	82.857	Gasterosteus_aculeatus
ENSLBEG00000002556	-	85	52.658	ENSGAGG00000017616	RBM45	96	52.228	Gopherus_agassizii
ENSLBEG00000002556	-	99	58.901	ENSGGOG00000013981	RBM45	95	58.901	Gorilla_gorilla
ENSLBEG00000002556	-	99	83.628	ENSHBUG00000015980	rbm45	97	83.628	Haplochromis_burtoni
ENSLBEG00000002556	-	99	58.242	ENSHGLG00000007342	RBM45	95	58.242	Heterocephalus_glaber_female
ENSLBEG00000002556	-	99	39.294	ENSHGLG00100007533	-	93	39.956	Heterocephalus_glaber_male
ENSLBEG00000002556	-	99	58.810	ENSHGLG00100011482	-	97	58.810	Heterocephalus_glaber_male
ENSLBEG00000002556	-	99	77.056	ENSHCOG00000000850	rbm45	97	77.056	Hippocampus_comes
ENSLBEG00000002556	-	99	70.575	ENSIPUG00000019576	RBM45	98	70.575	Ictalurus_punctatus
ENSLBEG00000002556	-	99	58.681	ENSSTOG00000002708	RBM45	95	58.681	Ictidomys_tridecemlineatus
ENSLBEG00000002556	-	85	57.614	ENSJJAG00000001312	Rbm45	87	57.614	Jaculus_jaculus
ENSLBEG00000002556	-	99	72.532	ENSKMAG00000007636	rbm45	99	73.856	Kryptolebias_marmoratus
ENSLBEG00000002556	-	99	60.475	ENSLACG00000003728	RBM45	97	60.475	Latimeria_chalumnae
ENSLBEG00000002556	-	99	72.026	ENSLOCG00000006862	rbm45	97	72.026	Lepisosteus_oculatus
ENSLBEG00000002556	-	96	57.480	ENSLAFG00000007464	RBM45	97	57.480	Loxodonta_africana
ENSLBEG00000002556	-	99	59.121	ENSMFAG00000042524	RBM45	95	59.121	Macaca_fascicularis
ENSLBEG00000002556	-	99	59.121	ENSMMUG00000002013	RBM45	95	59.121	Macaca_mulatta
ENSLBEG00000002556	-	99	59.121	ENSMNEG00000029136	RBM45	95	59.121	Macaca_nemestrina
ENSLBEG00000002556	-	99	59.121	ENSMLEG00000042404	RBM45	95	59.121	Mandrillus_leucophaeus
ENSLBEG00000002556	-	99	86.889	ENSMAMG00000022413	rbm45	99	86.889	Mastacembelus_armatus
ENSLBEG00000002556	-	99	83.407	ENSMZEG00005027295	rbm45	97	83.407	Maylandia_zebra
ENSLBEG00000002556	-	96	54.856	ENSMGAG00000009496	RBM45	99	54.856	Meleagris_gallopavo
ENSLBEG00000002556	-	99	57.330	ENSMAUG00000016948	Rbm45	95	57.330	Mesocricetus_auratus
ENSLBEG00000002556	-	99	59.121	ENSMICG00000003787	RBM45	95	59.121	Microcebus_murinus
ENSLBEG00000002556	-	99	57.237	ENSMOCG00000017295	Rbm45	95	57.237	Microtus_ochrogaster
ENSLBEG00000002556	-	99	84.667	ENSMMOG00000006808	rbm45	98	84.667	Mola_mola
ENSLBEG00000002556	-	99	58.022	ENSMODG00000009742	RBM45	95	58.022	Monodelphis_domestica
ENSLBEG00000002556	-	99	81.678	ENSMALG00000022126	rbm45	99	81.236	Monopterus_albus
ENSLBEG00000002556	-	99	57.424	MGP_CAROLIEiJ_G0023686	Rbm45	95	57.424	Mus_caroli
ENSLBEG00000002556	-	99	57.860	ENSMUSG00000042369	Rbm45	95	57.860	Mus_musculus
ENSLBEG00000002556	-	99	57.675	MGP_PahariEiJ_G0025137	Rbm45	95	57.675	Mus_pahari
ENSLBEG00000002556	-	99	58.297	MGP_SPRETEiJ_G0024607	Rbm45	95	58.297	Mus_spretus
ENSLBEG00000002556	-	99	57.987	ENSMPUG00000003205	RBM45	95	57.987	Mustela_putorius_furo
ENSLBEG00000002556	-	99	45.671	ENSMLUG00000005782	RBM45	95	45.671	Myotis_lucifugus
ENSLBEG00000002556	-	99	57.987	ENSNGAG00000023886	Rbm45	95	57.987	Nannospalax_galili
ENSLBEG00000002556	-	99	86.747	ENSNBRG00000008816	rbm45	97	86.747	Neolamprologus_brichardi
ENSLBEG00000002556	-	99	59.121	ENSNLEG00000006080	RBM45	95	59.121	Nomascus_leucogenys
ENSLBEG00000002556	-	77	57.778	ENSMEUG00000007995	-	62	57.778	Notamacropus_eugenii
ENSLBEG00000002556	-	81	63.717	ENSOPRG00000002626	RBM45	79	63.717	Ochotona_princeps
ENSLBEG00000002556	-	99	57.549	ENSODEG00000007959	RBM45	95	57.549	Octodon_degus
ENSLBEG00000002556	-	99	84.735	ENSONIG00000001450	rbm45	97	84.735	Oreochromis_niloticus
ENSLBEG00000002556	-	99	57.105	ENSOANG00000008627	RBM45	99	57.105	Ornithorhynchus_anatinus
ENSLBEG00000002556	-	99	57.987	ENSOCUG00000001125	RBM45	95	57.987	Oryctolagus_cuniculus
ENSLBEG00000002556	-	99	80.222	ENSORLG00000024508	rbm45	97	80.222	Oryzias_latipes
ENSLBEG00000002556	-	99	82.000	ENSOMEG00000015870	rbm45	97	82.000	Oryzias_melastigma
ENSLBEG00000002556	-	99	58.333	ENSOGAG00000015195	RBM45	95	58.333	Otolemur_garnettii
ENSLBEG00000002556	-	99	58.370	ENSOARG00000017348	RBM45	96	58.370	Ovis_aries
ENSLBEG00000002556	-	99	58.643	ENSPPAG00000026278	RBM45	95	58.643	Pan_paniscus
ENSLBEG00000002556	-	99	58.057	ENSPPRG00000017073	RBM45	95	58.057	Panthera_pardus
ENSLBEG00000002556	-	99	58.057	ENSPTIG00000021277	RBM45	95	58.057	Panthera_tigris_altaica
ENSLBEG00000002556	-	99	58.901	ENSPTRG00000012686	RBM45	95	58.901	Pan_troglodytes
ENSLBEG00000002556	-	99	59.121	ENSPANG00000016088	RBM45	95	59.121	Papio_anubis
ENSLBEG00000002556	-	99	71.302	ENSPKIG00000000284	rbm45	97	71.302	Paramormyrops_kingsleyae
ENSLBEG00000002556	-	88	53.258	ENSPSIG00000002884	RBM45	99	53.258	Pelodiscus_sinensis
ENSLBEG00000002556	-	99	69.623	ENSPMGG00000001551	rbm45	99	69.623	Periophthalmus_magnuspinnatus
ENSLBEG00000002556	-	99	57.112	ENSPEMG00000002470	Rbm45	95	57.112	Peromyscus_maniculatus_bairdii
ENSLBEG00000002556	-	99	48.701	ENSPMAG00000002965	rbm45	98	48.701	Petromyzon_marinus
ENSLBEG00000002556	-	99	58.462	ENSPCIG00000025402	RBM45	95	58.462	Phascolarctos_cinereus
ENSLBEG00000002556	-	99	79.333	ENSPFOG00000006641	rbm45	99	79.333	Poecilia_formosa
ENSLBEG00000002556	-	99	79.333	ENSPLAG00000010571	rbm45	99	79.333	Poecilia_latipinna
ENSLBEG00000002556	-	99	79.333	ENSPMEG00000001067	rbm45	99	79.333	Poecilia_mexicana
ENSLBEG00000002556	-	99	79.111	ENSPREG00000004579	rbm45	99	79.111	Poecilia_reticulata
ENSLBEG00000002556	-	99	58.901	ENSPPYG00000012974	RBM45	95	58.901	Pongo_abelii
ENSLBEG00000002556	-	70	65.347	ENSPCAG00000004338	RBM45	67	65.347	Procavia_capensis
ENSLBEG00000002556	-	99	59.121	ENSPCOG00000021526	RBM45	95	59.121	Propithecus_coquereli
ENSLBEG00000002556	-	99	58.462	ENSPVAG00000010390	RBM45	95	58.462	Pteropus_vampyrus
ENSLBEG00000002556	-	99	73.469	ENSPNYG00000010755	rbm45	99	73.469	Pundamilia_nyererei
ENSLBEG00000002556	-	99	72.185	ENSPNAG00000021750	rbm45	97	72.185	Pygocentrus_nattereri
ENSLBEG00000002556	-	99	57.675	ENSRNOG00000010595	Rbm45	95	57.675	Rattus_norvegicus
ENSLBEG00000002556	-	99	58.901	ENSRBIG00000033680	RBM45	95	58.901	Rhinopithecus_bieti
ENSLBEG00000002556	-	99	58.901	ENSRROG00000031398	RBM45	95	58.901	Rhinopithecus_roxellana
ENSLBEG00000002556	-	99	59.121	ENSSBOG00000005469	RBM45	95	59.121	Saimiri_boliviensis_boliviensis
ENSLBEG00000002556	-	99	57.256	ENSSHAG00000005667	RBM45	99	57.256	Sarcophilus_harrisii
ENSLBEG00000002556	-	99	71.523	ENSSFOG00015012262	rbm45	97	71.523	Scleropages_formosus
ENSLBEG00000002556	-	91	86.232	ENSSMAG00000001822	rbm45	94	86.232	Scophthalmus_maximus
ENSLBEG00000002556	-	99	89.111	ENSSDUG00000014461	rbm45	97	89.111	Seriola_dumerili
ENSLBEG00000002556	-	99	88.889	ENSSLDG00000017621	rbm45	97	88.889	Seriola_lalandi_dorsalis
ENSLBEG00000002556	-	99	46.070	ENSSARG00000001516	RBM45	95	46.070	Sorex_araneus
ENSLBEG00000002556	-	99	53.084	ENSSPUG00000005740	RBM45	88	53.084	Sphenodon_punctatus
ENSLBEG00000002556	-	99	86.117	ENSSPAG00000023188	rbm45	97	86.117	Stegastes_partitus
ENSLBEG00000002556	-	99	58.242	ENSSSCG00000015996	RBM45	93	64.516	Sus_scrofa
ENSLBEG00000002556	-	63	57.018	ENSTGUG00000015654	-	99	57.018	Taeniopygia_guttata
ENSLBEG00000002556	-	99	55.142	ENSTGUG00000009116	-	93	55.142	Taeniopygia_guttata
ENSLBEG00000002556	-	99	80.667	ENSTRUG00000005485	rbm45	99	80.667	Takifugu_rubripes
ENSLBEG00000002556	-	99	75.705	ENSTNIG00000009859	rbm45	97	75.705	Tetraodon_nigroviridis
ENSLBEG00000002556	-	69	49.225	ENSTBEG00000014236	-	100	49.225	Tupaia_belangeri
ENSLBEG00000002556	-	99	50.989	ENSTTRG00000007653	RBM45	95	50.989	Tursiops_truncatus
ENSLBEG00000002556	-	99	58.242	ENSUAMG00000012989	RBM45	95	58.242	Ursus_americanus
ENSLBEG00000002556	-	99	58.206	ENSUMAG00000016503	RBM45	96	58.206	Ursus_maritimus
ENSLBEG00000002556	-	70	57.500	ENSVPAG00000001558	RBM45	94	57.500	Vicugna_pacos
ENSLBEG00000002556	-	99	57.768	ENSVVUG00000010078	RBM45	95	57.768	Vulpes_vulpes
ENSLBEG00000002556	-	99	57.173	ENSXETG00000015007	rbm45	97	57.173	Xenopus_tropicalis
ENSLBEG00000002556	-	99	75.778	ENSXCOG00000014247	rbm45	99	75.778	Xiphophorus_couchianus
ENSLBEG00000002556	-	99	78.889	ENSXMAG00000026302	rbm45	99	78.889	Xiphophorus_maculatus