EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000002594 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 8116 bases
Position: chrFKLU01000011.1:134431-142546
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000003356	zf-C2H2	PF00096.26	2.1e-17	1	3
ENSLBEP00000003356	zf-C2H2	PF00096.26	2.1e-17	2	3
ENSLBEP00000003356	zf-C2H2	PF00096.26	2.1e-17	3	3
ENSLBEP00000003356	zf-met	PF12874.7	8.4e-15	1	2
ENSLBEP00000003356	zf-met	PF12874.7	8.4e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000003528	-	759	-	ENSLBEP00000003356	252 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000002594's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000002594's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000002594	-	58	35.135	ENSLBEG00000025689	-	66	35.514
ENSLBEG00000002594	-	50	45.098	ENSLBEG00000012947	-	87	45.455
ENSLBEG00000002594	-	60	32.903	ENSLBEG00000011028	-	72	32.653
ENSLBEG00000002594	-	57	37.736	ENSLBEG00000007106	-	58	32.624
ENSLBEG00000002594	-	60	43.662	ENSLBEG00000017424	-	90	47.170
ENSLBEG00000002594	-	56	34.752	ENSLBEG00000000373	-	70	34.752
ENSLBEG00000002594	-	94	31.902	ENSLBEG00000009580	-	82	33.333
ENSLBEG00000002594	-	65	43.333	ENSLBEG00000001920	-	83	40.179
ENSLBEG00000002594	-	59	37.624	ENSLBEG00000025139	-	62	41.121
ENSLBEG00000002594	-	74	34.862	ENSLBEG00000024737	-	91	33.099
ENSLBEG00000002594	-	63	37.681	ENSLBEG00000018509	-	88	37.681
ENSLBEG00000002594	-	65	30.496	ENSLBEG00000005729	znf652	54	31.111
ENSLBEG00000002594	-	58	38.095	ENSLBEG00000017450	-	77	38.028
ENSLBEG00000002594	-	58	36.190	ENSLBEG00000020747	-	87	35.211
ENSLBEG00000002594	-	67	34.653	ENSLBEG00000024536	-	80	35.417
ENSLBEG00000002594	-	56	36.620	ENSLBEG00000011289	-	53	35.915
ENSLBEG00000002594	-	57	34.228	ENSLBEG00000002278	-	66	35.211
ENSLBEG00000002594	-	60	34.375	ENSLBEG00000000435	-	71	35.766
ENSLBEG00000002594	-	57	32.692	ENSLBEG00000006161	-	74	30.088
ENSLBEG00000002594	-	69	36.957	ENSLBEG00000011986	-	64	36.957
ENSLBEG00000002594	-	66	44.444	ENSLBEG00000007251	-	72	44.000
ENSLBEG00000002594	-	58	34.266	ENSLBEG00000007837	-	82	36.429
ENSLBEG00000002594	-	58	40.268	ENSLBEG00000011091	si:cabz01071911.3	94	40.426
ENSLBEG00000002594	-	60	37.931	ENSLBEG00000017726	-	74	33.103
ENSLBEG00000002594	-	60	35.644	ENSLBEG00000008439	znf319b	59	35.644
ENSLBEG00000002594	-	62	38.710	ENSLBEG00000011145	si:cabz01071911.3	75	38.028
ENSLBEG00000002594	-	56	34.694	ENSLBEG00000011250	-	55	34.752
ENSLBEG00000002594	-	69	32.812	ENSLBEG00000009567	-	51	32.990
ENSLBEG00000002594	-	63	38.095	ENSLBEG00000008115	-	85	36.364
ENSLBEG00000002594	-	60	40.741	ENSLBEG00000002357	-	89	36.620
ENSLBEG00000002594	-	60	35.374	ENSLBEG00000000369	-	83	34.286
ENSLBEG00000002594	-	67	38.144	ENSLBEG00000014211	-	83	38.202
ENSLBEG00000002594	-	57	36.000	ENSLBEG00000011349	-	63	35.461
ENSLBEG00000002594	-	87	41.441	ENSLBEG00000010165	-	87	41.935
ENSLBEG00000002594	-	60	33.784	ENSLBEG00000021260	-	75	33.803
ENSLBEG00000002594	-	58	37.615	ENSLBEG00000004833	-	64	37.097
ENSLBEG00000002594	-	57	36.879	ENSLBEG00000011313	-	67	36.879
ENSLBEG00000002594	-	62	38.710	ENSLBEG00000001756	-	90	39.286
ENSLBEG00000002594	-	55	37.736	ENSLBEG00000008909	-	51	37.624
ENSLBEG00000002594	-	56	35.616	ENSLBEG00000004805	-	74	35.417
ENSLBEG00000002594	-	63	34.641	ENSLBEG00000028271	-	70	34.932
ENSLBEG00000002594	-	73	34.667	ENSLBEG00000010278	-	96	46.809
ENSLBEG00000002594	-	59	36.283	ENSLBEG00000025696	-	59	36.792
ENSLBEG00000002594	-	66	40.972	ENSLBEG00000022736	prdm5	63	41.481
ENSLBEG00000002594	-	56	36.170	ENSLBEG00000006924	-	95	36.170
ENSLBEG00000002594	-	59	40.385	ENSLBEG00000012151	zbtb48	51	40.385
ENSLBEG00000002594	-	71	39.474	ENSLBEG00000015694	-	77	39.310
ENSLBEG00000002594	-	73	34.328	ENSLBEG00000011465	-	83	33.846
ENSLBEG00000002594	-	58	34.862	ENSLBEG00000000343	-	67	34.043
ENSLBEG00000002594	-	78	38.983	ENSLBEG00000013570	-	97	39.823
ENSLBEG00000002594	-	68	33.803	ENSLBEG00000008850	-	51	33.803
ENSLBEG00000002594	-	63	36.449	ENSLBEG00000015264	-	73	37.500
ENSLBEG00000002594	-	62	38.806	ENSLBEG00000026457	-	88	37.736
ENSLBEG00000002594	-	65	30.496	ENSLBEG00000027993	-	69	31.214
ENSLBEG00000002594	-	87	34.899	ENSLBEG00000001132	-	60	45.455
ENSLBEG00000002594	-	53	34.286	ENSLBEG00000012438	ZNF319	89	34.286
ENSLBEG00000002594	-	71	43.860	ENSLBEG00000005307	znf236	57	36.522
ENSLBEG00000002594	-	56	37.415	ENSLBEG00000004867	-	63	37.589
ENSLBEG00000002594	-	73	38.095	ENSLBEG00000005715	-	77	38.095
ENSLBEG00000002594	-	73	44.231	ENSLBEG00000013235	-	80	40.000
ENSLBEG00000002594	-	76	41.121	ENSLBEG00000008689	-	81	48.936
ENSLBEG00000002594	-	69	34.959	ENSLBEG00000024509	-	99	34.400
ENSLBEG00000002594	-	56	35.354	ENSLBEG00000012201	-	56	33.099
ENSLBEG00000002594	-	56	35.965	ENSLBEG00000007937	-	56	35.780
ENSLBEG00000002594	-	57	45.283	ENSLBEG00000020128	-	94	39.216
ENSLBEG00000002594	-	56	40.594	ENSLBEG00000014282	-	66	40.625
ENSLBEG00000002594	-	62	35.897	ENSLBEG00000008606	-	95	36.111
ENSLBEG00000002594	-	67	33.793	ENSLBEG00000000393	-	62	34.058
ENSLBEG00000002594	-	72	36.957	ENSLBEG00000004892	-	73	35.461
ENSLBEG00000002594	-	61	35.577	ENSLBEG00000028243	-	80	35.821
ENSLBEG00000002594	-	56	38.889	ENSLBEG00000024458	-	73	38.889
ENSLBEG00000002594	-	67	36.170	ENSLBEG00000018970	-	77	35.211

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000002594	-	62	61.111	ENSCGRG00000000462	Sall4	57	56.000	Cricetulus_griseus_crigri
ENSLBEG00000002594	-	56	34.247	ENSSTOG00000025002	SALL4	57	58.108	Ictidomys_tridecemlineatus
ENSLBEG00000002594	-	53	72.549	ENSJJAG00000020688	Sall4	50	61.538	Jaculus_jaculus
ENSLBEG00000002594	-	62	59.459	ENSMAUG00000015814	Sall4	57	56.000	Mesocricetus_auratus
ENSLBEG00000002594	-	62	58.182	ENSMOCG00000018245	Sall4	52	61.194	Microtus_ochrogaster
ENSLBEG00000002594	-	62	58.228	MGP_CAROLIEiJ_G0024723	Sall4	50	62.687	Mus_caroli
ENSLBEG00000002594	-	62	58.228	ENSMUSG00000027547	Sall4	50	62.687	Mus_musculus
ENSLBEG00000002594	-	62	58.228	MGP_PahariEiJ_G0026164	Sall4	50	62.687	Mus_pahari
ENSLBEG00000002594	-	62	58.228	MGP_SPRETEiJ_G0025643	Sall4	50	62.687	Mus_spretus
ENSLBEG00000002594	-	53	74.510	ENSPEMG00000022706	Sall4	51	62.687	Peromyscus_maniculatus_bairdii