EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000002691 (Gene tree)
Gene ID: 109992278
Gene Symbol: xrcc6
Alias: Ku autoantigen|Ku70|g22p1|wu:fi87b06|zgc:64131
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 4655 bases
Position: chrFKLU01000226.1:772035-776689
Accession: 109992278
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000003468	SAP	PF02037.27	3e-09	1	1
ENSLBEP00000003490	SAP	PF02037.27	3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000003675	-	1876	XM_020644822	ENSLBEP00000003490	619 (aa)	XP_020500478	-
ENSLBET00000003651	-	1865	-	ENSLBEP00000003468	615 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000002691's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000002691's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000002691	xrcc6	99	55.556	ENSG00000196419	XRCC6	99	55.556	Homo_sapiens
ENSLBEG00000002691	xrcc6	99	86.020	ENSAPOG00000012704	xrcc6	99	86.020	Acanthochromis_polyacanthus
ENSLBEG00000002691	xrcc6	99	85.691	ENSACIG00000021277	xrcc6	99	85.691	Amphilophus_citrinellus
ENSLBEG00000002691	xrcc6	99	86.349	ENSAOCG00000021344	xrcc6	99	86.349	Amphiprion_ocellaris
ENSLBEG00000002691	xrcc6	99	86.349	ENSAPEG00000020712	xrcc6	99	86.349	Amphiprion_percula
ENSLBEG00000002691	xrcc6	99	87.192	ENSATEG00000007119	xrcc6	99	87.192	Anabas_testudineus
ENSLBEG00000002691	xrcc6	89	60.989	ENSAPLG00000004469	XRCC6	98	60.989	Anas_platyrhynchos
ENSLBEG00000002691	xrcc6	99	47.471	ENSANAG00000023445	-	99	47.394	Aotus_nancymaae
ENSLBEG00000002691	xrcc6	99	55.556	ENSANAG00000018684	XRCC6	99	55.392	Aotus_nancymaae
ENSLBEG00000002691	xrcc6	99	48.768	ENSANAG00000020017	-	91	56.863	Aotus_nancymaae
ENSLBEG00000002691	xrcc6	98	49.425	ENSANAG00000035230	-	99	49.097	Aotus_nancymaae
ENSLBEG00000002691	xrcc6	99	86.513	ENSACLG00000018608	xrcc6	99	86.513	Astatotilapia_calliptera
ENSLBEG00000002691	xrcc6	99	76.190	ENSAMXG00000007545	xrcc6	100	76.190	Astyanax_mexicanus
ENSLBEG00000002691	xrcc6	99	55.556	ENSCJAG00000045512	XRCC6	99	55.392	Callithrix_jacchus
ENSLBEG00000002691	xrcc6	99	55.229	ENSTSYG00000011348	XRCC6	99	55.229	Carlito_syrichta
ENSLBEG00000002691	xrcc6	98	44.316	ENSCCAG00000035711	-	99	44.975	Cebus_capucinus
ENSLBEG00000002691	xrcc6	99	52.451	ENSCCAG00000030041	-	94	52.053	Cebus_capucinus
ENSLBEG00000002691	xrcc6	99	46.798	ENSCCAG00000037663	-	97	46.798	Cebus_capucinus
ENSLBEG00000002691	xrcc6	92	54.517	ENSCCAG00000030468	-	99	54.206	Cebus_capucinus
ENSLBEG00000002691	xrcc6	99	55.556	ENSCATG00000042366	XRCC6	99	55.556	Cercocebus_atys
ENSLBEG00000002691	xrcc6	99	55.974	ENSCLAG00000016669	XRCC6	99	55.974	Chinchilla_lanigera
ENSLBEG00000002691	xrcc6	99	55.556	ENSCSAG00000005784	XRCC6	99	55.556	Chlorocebus_sabaeus
ENSLBEG00000002691	xrcc6	99	58.824	ENSCPBG00000020535	XRCC6	99	58.824	Chrysemys_picta_bellii
ENSLBEG00000002691	xrcc6	97	35.167	ENSCING00000000633	-	95	35.112	Ciona_intestinalis
ENSLBEG00000002691	xrcc6	99	55.556	ENSCANG00000031032	XRCC6	99	55.556	Colobus_angolensis_palliatus
ENSLBEG00000002691	xrcc6	98	52.389	ENSCGRG00001019029	Xrcc6	99	52.389	Cricetulus_griseus_chok1gshd
ENSLBEG00000002691	xrcc6	98	56.507	ENSCGRG00000001528	Xrcc6	99	56.507	Cricetulus_griseus_crigri
ENSLBEG00000002691	xrcc6	99	78.618	ENSCSEG00000020434	xrcc6	99	78.618	Cynoglossus_semilaevis
ENSLBEG00000002691	xrcc6	99	83.224	ENSCVAG00000002189	xrcc6	99	83.224	Cyprinodon_variegatus
ENSLBEG00000002691	xrcc6	99	73.934	ENSDARG00000071551	xrcc6	99	73.934	Danio_rerio
ENSLBEG00000002691	xrcc6	77	52.308	ENSETEG00000015333	-	77	52.308	Echinops_telfairi
ENSLBEG00000002691	xrcc6	99	54.664	ENSEASG00005001514	XRCC6	99	55.155	Equus_asinus_asinus
ENSLBEG00000002691	xrcc6	99	54.828	ENSECAG00000017563	XRCC6	99	54.867	Equus_caballus
ENSLBEG00000002691	xrcc6	99	73.115	ENSELUG00000020301	xrcc6	100	73.115	Esox_lucius
ENSLBEG00000002691	xrcc6	98	58.660	ENSFALG00000011908	XRCC6	96	58.824	Ficedula_albicollis
ENSLBEG00000002691	xrcc6	99	85.362	ENSFHEG00000016833	xrcc6	99	85.362	Fundulus_heteroclitus
ENSLBEG00000002691	xrcc6	99	66.938	ENSGMOG00000013524	xrcc6	100	66.938	Gadus_morhua
ENSLBEG00000002691	xrcc6	96	62.791	ENSGALG00000011932	XRCC6	99	58.995	Gallus_gallus
ENSLBEG00000002691	xrcc6	99	82.237	ENSGAFG00000008130	xrcc6	99	82.237	Gambusia_affinis
ENSLBEG00000002691	xrcc6	99	85.644	ENSGACG00000004868	xrcc6	99	85.644	Gasterosteus_aculeatus
ENSLBEG00000002691	xrcc6	99	58.333	ENSGAGG00000017518	XRCC6	99	58.333	Gopherus_agassizii
ENSLBEG00000002691	xrcc6	99	55.556	ENSGGOG00000015885	XRCC6	99	55.556	Gorilla_gorilla
ENSLBEG00000002691	xrcc6	92	86.525	ENSHBUG00000023281	xrcc6	99	86.525	Haplochromis_burtoni
ENSLBEG00000002691	xrcc6	99	54.918	ENSHGLG00000018078	XRCC6	99	54.262	Heterocephalus_glaber_female
ENSLBEG00000002691	xrcc6	99	54.918	ENSHGLG00100011264	XRCC6	99	54.262	Heterocephalus_glaber_male
ENSLBEG00000002691	xrcc6	99	80.131	ENSHCOG00000009821	xrcc6	99	80.131	Hippocampus_comes
ENSLBEG00000002691	xrcc6	99	75.041	ENSIPUG00000000767	xrcc6	99	75.041	Ictalurus_punctatus
ENSLBEG00000002691	xrcc6	98	56.158	ENSSTOG00000009490	XRCC6	99	55.483	Ictidomys_tridecemlineatus
ENSLBEG00000002691	xrcc6	98	52.138	ENSJJAG00000017136	Xrcc6	99	52.632	Jaculus_jaculus
ENSLBEG00000002691	xrcc6	99	85.691	ENSKMAG00000002141	xrcc6	99	85.691	Kryptolebias_marmoratus
ENSLBEG00000002691	xrcc6	87	63.107	ENSLOCG00000011533	xrcc6	99	63.107	Lepisosteus_oculatus
ENSLBEG00000002691	xrcc6	99	55.556	ENSMFAG00000003352	XRCC6	99	55.556	Macaca_fascicularis
ENSLBEG00000002691	xrcc6	99	55.556	ENSMMUG00000001856	XRCC6	99	55.556	Macaca_mulatta
ENSLBEG00000002691	xrcc6	99	55.556	ENSMNEG00000035076	XRCC6	99	55.556	Macaca_nemestrina
ENSLBEG00000002691	xrcc6	99	55.556	ENSMLEG00000019869	XRCC6	99	55.556	Mandrillus_leucophaeus
ENSLBEG00000002691	xrcc6	99	84.590	ENSMAMG00000003368	xrcc6	99	84.590	Mastacembelus_armatus
ENSLBEG00000002691	xrcc6	95	84.300	ENSMAMG00000003405	xrcc6	97	84.300	Mastacembelus_armatus
ENSLBEG00000002691	xrcc6	99	86.349	ENSMZEG00005028080	xrcc6	99	86.349	Maylandia_zebra
ENSLBEG00000002691	xrcc6	99	59.157	ENSMGAG00000012146	XRCC6	99	59.319	Meleagris_gallopavo
ENSLBEG00000002691	xrcc6	98	56.507	ENSMAUG00000017340	Xrcc6	99	56.507	Mesocricetus_auratus
ENSLBEG00000002691	xrcc6	98	56.013	ENSMOCG00000015717	Xrcc6	99	56.178	Microtus_ochrogaster
ENSLBEG00000002691	xrcc6	99	83.908	ENSMMOG00000003536	xrcc6	99	83.908	Mola_mola
ENSLBEG00000002691	xrcc6	99	85.550	ENSMALG00000013912	xrcc6	95	85.550	Monopterus_albus
ENSLBEG00000002691	xrcc6	99	54.501	MGP_CAROLIEiJ_G0020067	Xrcc6	99	54.098	Mus_caroli
ENSLBEG00000002691	xrcc6	99	57.377	ENSMUSG00000022471	Xrcc6	99	58.935	Mus_musculus
ENSLBEG00000002691	xrcc6	99	57.938	MGP_PahariEiJ_G0020069	Xrcc6	99	57.541	Mus_pahari
ENSLBEG00000002691	xrcc6	95	57.705	MGP_SPRETEiJ_G0020967	Xrcc6	99	57.705	Mus_spretus
ENSLBEG00000002691	xrcc6	98	55.848	ENSNGAG00000013750	Xrcc6	99	55.848	Nannospalax_galili
ENSLBEG00000002691	xrcc6	99	86.184	ENSNBRG00000004125	xrcc6	99	86.184	Neolamprologus_brichardi
ENSLBEG00000002691	xrcc6	94	56.454	ENSOPRG00000002386	XRCC6	99	56.454	Ochotona_princeps
ENSLBEG00000002691	xrcc6	99	54.992	ENSODEG00000015847	XRCC6	99	55.483	Octodon_degus
ENSLBEG00000002691	xrcc6	99	86.020	ENSONIG00000019715	xrcc6	99	86.020	Oreochromis_niloticus
ENSLBEG00000002691	xrcc6	68	57.895	ENSOANG00000011328	XRCC6	99	57.895	Ornithorhynchus_anatinus
ENSLBEG00000002691	xrcc6	98	55.757	ENSOCUG00000006948	XRCC6	99	56.086	Oryctolagus_cuniculus
ENSLBEG00000002691	xrcc6	99	82.430	ENSORLG00020007820	xrcc6	99	82.430	Oryzias_latipes_hni
ENSLBEG00000002691	xrcc6	99	82.430	ENSORLG00015006406	xrcc6	99	82.430	Oryzias_latipes_hsok
ENSLBEG00000002691	xrcc6	99	83.251	ENSOMEG00000008998	xrcc6	99	83.251	Oryzias_melastigma
ENSLBEG00000002691	xrcc6	99	55.155	ENSOGAG00000008821	XRCC6	99	54.992	Otolemur_garnettii
ENSLBEG00000002691	xrcc6	89	56.534	ENSPPAG00000037167	XRCC6	99	57.020	Pan_paniscus
ENSLBEG00000002691	xrcc6	99	55.556	ENSPTRG00000045824	XRCC6	99	56.239	Pan_troglodytes
ENSLBEG00000002691	xrcc6	99	55.556	ENSPTRG00000022548	XRCC6	99	56.239	Pan_troglodytes
ENSLBEG00000002691	xrcc6	99	55.392	ENSPANG00000001252	XRCC6	97	58.952	Papio_anubis
ENSLBEG00000002691	xrcc6	99	70.608	ENSPKIG00000003974	xrcc6	99	70.608	Paramormyrops_kingsleyae
ENSLBEG00000002691	xrcc6	98	81.894	ENSPMGG00000014220	xrcc6	100	81.728	Periophthalmus_magnuspinnatus
ENSLBEG00000002691	xrcc6	98	55.684	ENSPEMG00000023446	Xrcc6	99	55.684	Peromyscus_maniculatus_bairdii
ENSLBEG00000002691	xrcc6	98	57.496	ENSPCIG00000026409	XRCC6	99	57.496	Phascolarctos_cinereus
ENSLBEG00000002691	xrcc6	99	84.539	ENSPFOG00000017173	xrcc6	99	84.539	Poecilia_formosa
ENSLBEG00000002691	xrcc6	99	84.046	ENSPLAG00000000562	xrcc6	99	84.046	Poecilia_latipinna
ENSLBEG00000002691	xrcc6	99	84.375	ENSPMEG00000018478	xrcc6	99	84.375	Poecilia_mexicana
ENSLBEG00000002691	xrcc6	99	84.262	ENSPREG00000020957	xrcc6	93	84.262	Poecilia_reticulata
ENSLBEG00000002691	xrcc6	99	50.163	ENSPPYG00000011876	XRCC6	99	50.163	Pongo_abelii
ENSLBEG00000002691	xrcc6	99	56.066	ENSPVAG00000001168	XRCC6	99	56.066	Pteropus_vampyrus
ENSLBEG00000002691	xrcc6	99	86.184	ENSPNYG00000003815	xrcc6	99	82.003	Pundamilia_nyererei
ENSLBEG00000002691	xrcc6	99	56.557	ENSRNOG00000006392	Xrcc6	99	56.721	Rattus_norvegicus
ENSLBEG00000002691	xrcc6	99	51.471	ENSRBIG00000039794	XRCC6	99	51.789	Rhinopithecus_bieti
ENSLBEG00000002691	xrcc6	99	55.556	ENSRROG00000030297	XRCC6	99	55.556	Rhinopithecus_roxellana
ENSLBEG00000002691	xrcc6	67	50.122	ENSSBOG00000024724	-	99	50.122	Saimiri_boliviensis_boliviensis
ENSLBEG00000002691	xrcc6	99	56.209	ENSSHAG00000010790	XRCC6	99	56.209	Sarcophilus_harrisii
ENSLBEG00000002691	xrcc6	99	72.250	ENSSFOG00015014409	xrcc6	99	72.250	Scleropages_formosus
ENSLBEG00000002691	xrcc6	99	87.336	ENSSMAG00000006496	xrcc6	99	87.336	Scophthalmus_maximus
ENSLBEG00000002691	xrcc6	99	86.513	ENSSDUG00000007542	xrcc6	99	86.513	Seriola_dumerili
ENSLBEG00000002691	xrcc6	99	85.855	ENSSLDG00000009974	xrcc6	99	85.855	Seriola_lalandi_dorsalis
ENSLBEG00000002691	xrcc6	99	57.680	ENSSPUG00000012086	XRCC6	99	57.680	Sphenodon_punctatus
ENSLBEG00000002691	xrcc6	99	86.535	ENSSPAG00000015199	xrcc6	99	86.535	Stegastes_partitus
ENSLBEG00000002691	xrcc6	94	60.206	ENSTGUG00000009852	-	94	60.034	Taeniopygia_guttata
ENSLBEG00000002691	xrcc6	99	79.441	ENSTRUG00000017070	xrcc6	99	79.770	Takifugu_rubripes
ENSLBEG00000002691	xrcc6	95	78.098	ENSTNIG00000012947	xrcc6	99	78.098	Tetraodon_nigroviridis
ENSLBEG00000002691	xrcc6	95	52.226	ENSTBEG00000011736	XRCC6	99	52.226	Tupaia_belangeri
ENSLBEG00000002691	xrcc6	99	46.318	ENSTTRG00000006749	XRCC6	99	46.809	Tursiops_truncatus
ENSLBEG00000002691	xrcc6	99	85.033	ENSXMAG00000009691	xrcc6	99	85.033	Xiphophorus_maculatus