EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000002708 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 7479 bases
Position: chrFKLU01005404.1:65-7543
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000003540	DZF	PF07528.14	3.7e-28	1	1
ENSLBEP00000003540	dsrm	PF00035.26	1.2e-24	1	2
ENSLBEP00000003540	dsrm	PF00035.26	1.2e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000003727	-	1956	-	ENSLBEP00000003540	651 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000002708's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000002708's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000002708	-	94	88.906	ENSLBEG00000023354	ilf3b	75	88.906
ENSLBEG00000002708	-	61	53.699	ENSLBEG00000004741	strbp	60	55.348

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000002708	-	61	62.093	ENSG00000129351	ILF3	61	64.501	Homo_sapiens
ENSLBEG00000002708	-	61	77.938	ENSAPOG00000011438	ilf3b	62	77.698	Acanthochromis_polyacanthus
ENSLBEG00000002708	-	61	76.739	ENSACIG00000020521	ilf3b	60	76.499	Amphilophus_citrinellus
ENSLBEG00000002708	-	88	73.256	ENSAPEG00000017659	ilf3b	51	77.143	Amphiprion_percula
ENSLBEG00000002708	-	61	76.247	ENSATEG00000012690	ilf3b	70	75.772	Anabas_testudineus
ENSLBEG00000002708	-	94	77.160	ENSATEG00000012555	ilf3b	61	79.524	Anabas_testudineus
ENSLBEG00000002708	-	61	61.860	ENSANAG00000026889	ILF3	61	64.269	Aotus_nancymaae
ENSLBEG00000002708	-	61	78.571	ENSACLG00000001608	ilf3b	61	78.571	Astatotilapia_calliptera
ENSLBEG00000002708	-	94	65.046	ENSAMXG00000020710	ilf3b	59	73.544	Astyanax_mexicanus
ENSLBEG00000002708	-	61	61.628	ENSBTAG00000040076	ILF3	60	62.558	Bos_taurus
ENSLBEG00000002708	-	61	61.860	ENSCJAG00000006374	ILF3	60	64.269	Callithrix_jacchus
ENSLBEG00000002708	-	61	62.093	ENSCAFG00020024492	ILF3	60	64.037	Canis_lupus_dingo
ENSLBEG00000002708	-	61	62.093	ENSTSYG00000000317	ILF3	61	64.037	Carlito_syrichta
ENSLBEG00000002708	-	61	61.860	ENSCAPG00000009767	ILF3	60	63.488	Cavia_aperea
ENSLBEG00000002708	-	61	61.860	ENSCPOG00000013726	ILF3	59	63.488	Cavia_porcellus
ENSLBEG00000002708	-	61	62.181	ENSCCAG00000019834	ILF3	61	64.269	Cebus_capucinus
ENSLBEG00000002708	-	61	62.093	ENSCATG00000023258	ILF3	60	64.501	Cercocebus_atys
ENSLBEG00000002708	-	61	62.093	ENSCLAG00000011537	ILF3	60	63.256	Chinchilla_lanigera
ENSLBEG00000002708	-	61	62.093	ENSCSAG00000006983	ILF3	60	64.501	Chlorocebus_sabaeus
ENSLBEG00000002708	-	50	63.248	ENSCPBG00000010274	ILF3	53	65.242	Chrysemys_picta_bellii
ENSLBEG00000002708	-	68	58.714	ENSCANG00000014037	ILF3	62	64.501	Colobus_angolensis_palliatus
ENSLBEG00000002708	-	61	60.465	ENSCGRG00001021577	Ilf3	60	62.093	Cricetulus_griseus_chok1gshd
ENSLBEG00000002708	-	61	60.465	ENSCGRG00000005960	Ilf3	59	62.093	Cricetulus_griseus_crigri
ENSLBEG00000002708	-	60	75.181	ENSCVAG00000007840	ilf3b	62	73.333	Cyprinodon_variegatus
ENSLBEG00000002708	-	94	62.287	ENSDARG00000105177	ilf3b	81	63.682	Danio_rerio
ENSLBEG00000002708	-	61	60.698	ENSDORG00000015231	Ilf3	60	62.558	Dipodomys_ordii
ENSLBEG00000002708	-	61	61.628	ENSETEG00000015741	ILF3	59	63.256	Echinops_telfairi
ENSLBEG00000002708	-	61	62.181	ENSEASG00005008476	ILF3	60	62.791	Equus_asinus_asinus
ENSLBEG00000002708	-	94	66.718	ENSELUG00000000372	ilf3b	61	76.316	Esox_lucius
ENSLBEG00000002708	-	61	61.628	ENSFCAG00000004887	ILF3	60	63.573	Felis_catus
ENSLBEG00000002708	-	61	61.860	ENSFDAG00000012706	ILF3	60	63.023	Fukomys_damarensis
ENSLBEG00000002708	-	94	66.816	ENSFHEG00000009438	ilf3b	60	75.845	Fundulus_heteroclitus
ENSLBEG00000002708	-	61	62.093	ENSGALG00000030351	ILF3	50	63.303	Gallus_gallus
ENSLBEG00000002708	-	61	62.093	ENSGAGG00000001571	ILF3	60	63.721	Gopherus_agassizii
ENSLBEG00000002708	-	61	62.093	ENSGGOG00000004144	ILF3	60	64.501	Gorilla_gorilla
ENSLBEG00000002708	-	61	78.571	ENSHBUG00000019941	ilf3b	61	78.571	Haplochromis_burtoni
ENSLBEG00000002708	-	66	52.597	ENSHGLG00000017093	-	61	54.279	Heterocephalus_glaber_female
ENSLBEG00000002708	-	63	48.899	ENSHGLG00000015334	-	60	48.837	Heterocephalus_glaber_female
ENSLBEG00000002708	-	69	49.278	ENSHGLG00000018011	-	58	51.276	Heterocephalus_glaber_female
ENSLBEG00000002708	-	61	62.093	ENSHGLG00000019494	-	60	63.341	Heterocephalus_glaber_female
ENSLBEG00000002708	-	63	46.476	ENSHGLG00100007409	-	59	46.279	Heterocephalus_glaber_male
ENSLBEG00000002708	-	69	49.278	ENSHGLG00100016819	-	63	51.740	Heterocephalus_glaber_male
ENSLBEG00000002708	-	68	51.983	ENSHGLG00100011979	-	62	54.756	Heterocephalus_glaber_male
ENSLBEG00000002708	-	61	61.860	ENSHGLG00100007068	-	60	63.109	Heterocephalus_glaber_male
ENSLBEG00000002708	-	94	65.163	ENSHCOG00000019528	ilf3b	50	70.167	Hippocampus_comes
ENSLBEG00000002708	-	61	61.860	ENSSTOG00000007786	ILF3	60	63.573	Ictidomys_tridecemlineatus
ENSLBEG00000002708	-	61	60.970	ENSJJAG00000013051	-	60	62.791	Jaculus_jaculus
ENSLBEG00000002708	-	94	68.049	ENSKMAG00000010770	ilf3b	61	74.048	Kryptolebias_marmoratus
ENSLBEG00000002708	-	61	72.010	ENSLOCG00000008430	ilf3b	61	72.010	Lepisosteus_oculatus
ENSLBEG00000002708	-	61	62.093	ENSMFAG00000039557	ILF3	60	64.501	Macaca_fascicularis
ENSLBEG00000002708	-	61	62.093	ENSMMUG00000014673	ILF3	60	64.501	Macaca_mulatta
ENSLBEG00000002708	-	61	62.093	ENSMNEG00000042707	ILF3	60	64.501	Macaca_nemestrina
ENSLBEG00000002708	-	61	62.093	ENSMLEG00000042847	ILF3	61	64.501	Mandrillus_leucophaeus
ENSLBEG00000002708	-	94	74.885	ENSMAMG00000010601	ilf3b	63	78.177	Mastacembelus_armatus
ENSLBEG00000002708	-	61	78.571	ENSMZEG00005002368	ilf3b	61	78.571	Maylandia_zebra
ENSLBEG00000002708	-	61	62.645	ENSMICG00000009694	ILF3	60	64.269	Microcebus_murinus
ENSLBEG00000002708	-	61	60.930	ENSMOCG00000018740	Ilf3	60	62.558	Microtus_ochrogaster
ENSLBEG00000002708	-	61	74.710	ENSMMOG00000006290	ilf3b	62	74.710	Mola_mola
ENSLBEG00000002708	-	94	73.725	ENSMALG00000002228	ilf3b	61	79.524	Monopterus_albus
ENSLBEG00000002708	-	61	60.698	MGP_CAROLIEiJ_G0031871	Ilf3	60	62.326	Mus_caroli
ENSLBEG00000002708	-	61	60.698	ENSMUSG00000032178	Ilf3	62	88.462	Mus_musculus
ENSLBEG00000002708	-	61	60.930	MGP_PahariEiJ_G0014737	Ilf3	60	62.558	Mus_pahari
ENSLBEG00000002708	-	61	60.698	MGP_SPRETEiJ_G0032995	Ilf3	60	62.326	Mus_spretus
ENSLBEG00000002708	-	60	51.282	ENSNGAG00000015146	-	59	58.873	Nannospalax_galili
ENSLBEG00000002708	-	61	61.848	ENSNGAG00000009786	-	60	62.645	Nannospalax_galili
ENSLBEG00000002708	-	61	60.930	ENSNLEG00000012290	ILF3	60	63.023	Nomascus_leucogenys
ENSLBEG00000002708	-	61	59.906	ENSODEG00000015951	ILF3	53	59.434	Octodon_degus
ENSLBEG00000002708	-	61	79.048	ENSONIG00000008081	ilf3b	62	76.977	Oreochromis_niloticus
ENSLBEG00000002708	-	94	63.817	ENSORLG00000016379	ilf3b	59	74.201	Oryzias_latipes
ENSLBEG00000002708	-	94	63.969	ENSORLG00015015108	ilf3b	60	73.188	Oryzias_latipes_hsok
ENSLBEG00000002708	-	94	66.771	ENSOMEG00000017273	ilf3b	60	73.956	Oryzias_melastigma
ENSLBEG00000002708	-	70	48.600	ENSOGAG00000030527	-	62	50.461	Otolemur_garnettii
ENSLBEG00000002708	-	61	61.860	ENSPPAG00000040547	ILF3	60	64.269	Pan_paniscus
ENSLBEG00000002708	-	61	61.860	ENSPPRG00000021486	ILF3	61	63.256	Panthera_pardus
ENSLBEG00000002708	-	61	61.860	ENSPTIG00000021627	ILF3	60	63.805	Panthera_tigris_altaica
ENSLBEG00000002708	-	61	61.860	ENSPTRG00000010480	ILF3	60	64.269	Pan_troglodytes
ENSLBEG00000002708	-	61	62.093	ENSPANG00000014995	ILF3	60	64.501	Papio_anubis
ENSLBEG00000002708	-	94	61.420	ENSPKIG00000007019	ilf3b	60	69.398	Paramormyrops_kingsleyae
ENSLBEG00000002708	-	94	66.873	ENSPMGG00000001413	ilf3b	74	66.563	Periophthalmus_magnuspinnatus
ENSLBEG00000002708	-	61	60.698	ENSPEMG00000000465	-	60	62.326	Peromyscus_maniculatus_bairdii
ENSLBEG00000002708	-	61	61.860	ENSPCIG00000015447	ILF3	60	63.488	Phascolarctos_cinereus
ENSLBEG00000002708	-	59	77.778	ENSPFOG00000001014	ilf3b	60	77.284	Poecilia_formosa
ENSLBEG00000002708	-	59	77.778	ENSPLAG00000018261	ilf3b	60	77.284	Poecilia_latipinna
ENSLBEG00000002708	-	94	68.779	ENSPMEG00000013635	ilf3b	60	77.037	Poecilia_mexicana
ENSLBEG00000002708	-	94	67.802	ENSPREG00000013654	ilf3b	60	76.543	Poecilia_reticulata
ENSLBEG00000002708	-	61	62.877	ENSPCOG00000019611	ILF3	61	64.501	Propithecus_coquereli
ENSLBEG00000002708	-	61	78.333	ENSPNYG00000002063	ilf3b	61	78.333	Pundamilia_nyererei
ENSLBEG00000002708	-	94	66.052	ENSPNAG00000008276	ilf3b	60	72.857	Pygocentrus_nattereri
ENSLBEG00000002708	-	61	62.093	ENSRBIG00000038846	ILF3	50	64.501	Rhinopithecus_bieti
ENSLBEG00000002708	-	61	62.093	ENSRROG00000031702	ILF3	61	64.501	Rhinopithecus_roxellana
ENSLBEG00000002708	-	61	62.125	ENSSBOG00000027756	ILF3	61	64.203	Saimiri_boliviensis_boliviensis
ENSLBEG00000002708	-	94	60.213	ENSSFOG00015008720	-	55	69.065	Scleropages_formosus
ENSLBEG00000002708	-	61	69.767	ENSSFOG00015014881	ilf3b	61	70.047	Scleropages_formosus
ENSLBEG00000002708	-	94	70.183	ENSSMAG00000002392	ilf3b	61	77.804	Scophthalmus_maximus
ENSLBEG00000002708	-	61	80.714	ENSSDUG00000008684	ilf3b	61	80.714	Seriola_dumerili
ENSLBEG00000002708	-	61	80.714	ENSSLDG00000017171	ilf3b	61	80.714	Seriola_lalandi_dorsalis
ENSLBEG00000002708	-	61	60.698	ENSSSCG00000013638	ILF3	60	62.558	Sus_scrofa
ENSLBEG00000002708	-	58	64.604	ENSTGUG00000013676	ILF3	50	67.532	Taeniopygia_guttata
ENSLBEG00000002708	-	60	69.834	ENSTRUG00000010961	ilf3b	61	69.834	Takifugu_rubripes
ENSLBEG00000002708	-	94	47.442	ENSTNIG00000008329	ilf3b	58	65.068	Tetraodon_nigroviridis
ENSLBEG00000002708	-	61	61.860	ENSUAMG00000017664	ILF3	61	63.805	Ursus_americanus
ENSLBEG00000002708	-	61	61.628	ENSUMAG00000025049	ILF3	60	63.256	Ursus_maritimus
ENSLBEG00000002708	-	61	61.860	ENSVVUG00000017504	ILF3	54	63.488	Vulpes_vulpes
ENSLBEG00000002708	-	59	49.299	ENSXETG00000011651	ilf3	58	50.831	Xenopus_tropicalis
ENSLBEG00000002708	-	94	67.957	ENSXMAG00000008854	ilf3b	52	76.098	Xiphophorus_maculatus