EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000002926 (Gene tree)
Gene ID: 109999777
Gene Symbol: si:dkey-34d22.5
Alias: -
Full Name: ras-related protein Rab-39B-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 4812 bases
Position: chrFKLU01000599.1:126293-131104
Accession: 109999777
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000003765	MMR_HSR1	PF01926.23	3.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000003964	-	3661	XM_020654906	ENSLBEP00000003765	221 (aa)	XP_020510562	UPI0009B4CC21

Gene Model

Click here to download ENSLBEG00000002926's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000002926's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000002926	si:dkey-34d22.5	73	41.975	ENSLBEG00000016446	rab25b	76	41.975
ENSLBEG00000002926	si:dkey-34d22.5	80	32.961	ENSLBEG00000017798	-	84	32.961
ENSLBEG00000002926	si:dkey-34d22.5	69	32.680	ENSLBEG00000028450	kras	98	31.217
ENSLBEG00000002926	si:dkey-34d22.5	90	53.000	ENSLBEG00000001313	RAB39B	93	53.000
ENSLBEG00000002926	si:dkey-34d22.5	99	36.986	ENSLBEG00000027781	rab1ab	94	36.986
ENSLBEG00000002926	si:dkey-34d22.5	76	41.317	ENSLBEG00000019428	rab18b	80	41.317
ENSLBEG00000002926	si:dkey-34d22.5	75	35.503	ENSLBEG00000003644	rabl2	71	35.503
ENSLBEG00000002926	si:dkey-34d22.5	73	46.626	ENSLBEG00000027539	-	73	46.626
ENSLBEG00000002926	si:dkey-34d22.5	79	38.202	ENSLBEG00000014427	rab33a	77	38.636
ENSLBEG00000002926	si:dkey-34d22.5	75	42.012	ENSLBEG00000020582	rab9a	82	42.012
ENSLBEG00000002926	si:dkey-34d22.5	55	32.308	ENSLBEG00000010627	-	54	32.308
ENSLBEG00000002926	si:dkey-34d22.5	67	36.735	ENSLBEG00000027819	rab34b	73	36.735
ENSLBEG00000002926	si:dkey-34d22.5	71	34.810	ENSLBEG00000019137	rhebl1	79	34.810
ENSLBEG00000002926	si:dkey-34d22.5	87	31.863	ENSLBEG00000016218	rasl11a	76	31.863
ENSLBEG00000002926	si:dkey-34d22.5	86	36.269	ENSLBEG00000026777	rab33ba	83	36.269
ENSLBEG00000002926	si:dkey-34d22.5	77	42.690	ENSLBEG00000026779	rab13	84	42.690
ENSLBEG00000002926	si:dkey-34d22.5	75	34.524	ENSLBEG00000027628	si:cabz01085950.1	82	34.524
ENSLBEG00000002926	si:dkey-34d22.5	80	40.341	ENSLBEG00000021040	rab1ba	86	40.341
ENSLBEG00000002926	si:dkey-34d22.5	68	39.355	ENSLBEG00000018063	-	63	39.355
ENSLBEG00000002926	si:dkey-34d22.5	97	38.605	ENSLBEG00000027226	-	89	38.426
ENSLBEG00000002926	si:dkey-34d22.5	75	35.542	ENSLBEG00000000119	rras2	80	35.542
ENSLBEG00000002926	si:dkey-34d22.5	91	33.654	ENSLBEG00000004172	-	94	33.654
ENSLBEG00000002926	si:dkey-34d22.5	77	39.766	ENSLBEG00000026857	rab11a	78	39.766
ENSLBEG00000002926	si:dkey-34d22.5	75	36.747	ENSLBEG00000002516	rab5aa	72	36.747
ENSLBEG00000002926	si:dkey-34d22.5	77	42.690	ENSLBEG00000003748	rab6a	78	42.690
ENSLBEG00000002926	si:dkey-34d22.5	76	31.977	ENSLBEG00000005018	rab32b	80	31.977
ENSLBEG00000002926	si:dkey-34d22.5	79	36.207	ENSLBEG00000026006	rab34a	65	36.207
ENSLBEG00000002926	si:dkey-34d22.5	75	36.145	ENSLBEG00000004128	rab5c	74	36.145
ENSLBEG00000002926	si:dkey-34d22.5	75	41.420	ENSLBEG00000005128	-	74	41.420
ENSLBEG00000002926	si:dkey-34d22.5	71	33.758	ENSLBEG00000014885	rheb	83	33.758
ENSLBEG00000002926	si:dkey-34d22.5	75	35.329	ENSLBEG00000003235	rab22a	84	35.329
ENSLBEG00000002926	si:dkey-34d22.5	95	41.232	ENSLBEG00000026989	RAB15	95	41.232
ENSLBEG00000002926	si:dkey-34d22.5	98	41.667	ENSLBEG00000026790	-	97	41.667
ENSLBEG00000002926	si:dkey-34d22.5	75	46.061	ENSLBEG00000013463	rab15	76	46.061
ENSLBEG00000002926	si:dkey-34d22.5	72	39.752	ENSLBEG00000013756	rab12	65	39.752
ENSLBEG00000002926	si:dkey-34d22.5	55	32.308	ENSLBEG00000020595	rabl3	54	32.308
ENSLBEG00000002926	si:dkey-34d22.5	91	33.654	ENSLBEG00000005981	-	94	33.654
ENSLBEG00000002926	si:dkey-34d22.5	71	32.278	ENSLBEG00000025705	si:ch73-116o1.2	80	32.353
ENSLBEG00000002926	si:dkey-34d22.5	78	43.605	ENSLBEG00000007681	si:dkey-16l2.16	80	43.605
ENSLBEG00000002926	si:dkey-34d22.5	76	40.719	ENSLBEG00000005861	rab18a	77	40.719
ENSLBEG00000002926	si:dkey-34d22.5	88	63.590	ENSLBEG00000001193	rab42a	88	63.590
ENSLBEG00000002926	si:dkey-34d22.5	97	30.909	ENSLBEG00000018812	RAB29	99	30.909
ENSLBEG00000002926	si:dkey-34d22.5	88	40.404	ENSLBEG00000026930	rab6ba	91	40.404
ENSLBEG00000002926	si:dkey-34d22.5	86	57.143	ENSLBEG00000022630	-	88	57.143
ENSLBEG00000002926	si:dkey-34d22.5	96	37.559	ENSLBEG00000019372	rab6bb	94	37.559
ENSLBEG00000002926	si:dkey-34d22.5	81	41.530	ENSLBEG00000028426	RAB1A	89	41.530
ENSLBEG00000002926	si:dkey-34d22.5	71	32.099	ENSLBEG00000028391	dnajc27	58	32.099
ENSLBEG00000002926	si:dkey-34d22.5	86	34.536	ENSLBEG00000018180	si:dkey-13a21.4	92	34.536
ENSLBEG00000002926	si:dkey-34d22.5	91	34.615	ENSLBEG00000006087	rab11ba	94	34.615
ENSLBEG00000002926	si:dkey-34d22.5	97	40.930	ENSLBEG00000019435	rab14	97	40.930
ENSLBEG00000002926	si:dkey-34d22.5	67	40.667	ENSLBEG00000025798	zgc:101559	63	40.667
ENSLBEG00000002926	si:dkey-34d22.5	76	44.311	ENSLBEG00000001146	rab30	80	44.311
ENSLBEG00000002926	si:dkey-34d22.5	79	32.584	ENSLBEG00000027691	RAB17	74	32.584
ENSLBEG00000002926	si:dkey-34d22.5	66	34.932	ENSLBEG00000003132	rras	77	33.962
ENSLBEG00000002926	si:dkey-34d22.5	70	34.194	ENSLBEG00000001905	hrasb	86	33.333
ENSLBEG00000002926	si:dkey-34d22.5	75	35.542	ENSLBEG00000013176	rab23	75	33.758
ENSLBEG00000002926	si:dkey-34d22.5	88	38.739	ENSLBEG00000015149	-	96	38.739
ENSLBEG00000002926	si:dkey-34d22.5	80	32.961	ENSLBEG00000001796	RAB7A	84	32.961
ENSLBEG00000002926	si:dkey-34d22.5	75	40.828	ENSLBEG00000011478	rab9b	76	40.828
ENSLBEG00000002926	si:dkey-34d22.5	75	36.145	ENSLBEG00000010408	-	74	36.145
ENSLBEG00000002926	si:dkey-34d22.5	78	44.186	ENSLBEG00000001618	rab35b	98	38.889
ENSLBEG00000002926	si:dkey-34d22.5	97	37.443	ENSLBEG00000003101	rab4a	97	37.443
ENSLBEG00000002926	si:dkey-34d22.5	97	30.909	ENSLBEG00000006152	-	99	30.909
ENSLBEG00000002926	si:dkey-34d22.5	77	43.275	ENSLBEG00000008746	RAB41	77	43.275
ENSLBEG00000002926	si:dkey-34d22.5	80	39.444	ENSLBEG00000016417	rab11al	81	39.444
ENSLBEG00000002926	si:dkey-34d22.5	98	38.249	ENSLBEG00000005791	-	98	38.249
ENSLBEG00000002926	si:dkey-34d22.5	92	34.762	ENSLBEG00000015248	rab11bb	94	34.762
ENSLBEG00000002926	si:dkey-34d22.5	81	38.764	ENSLBEG00000002367	rab25a	82	38.764
ENSLBEG00000002926	si:dkey-34d22.5	98	37.963	ENSLBEG00000020796	rab2a	99	37.963

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000002926	si:dkey-34d22.5	100	82.805	ENSACIG00000016958	si:dkey-34d22.5	99	82.805	Amphilophus_citrinellus
ENSLBEG00000002926	si:dkey-34d22.5	100	86.878	ENSATEG00000010784	si:dkey-34d22.5	86	86.878	Anabas_testudineus
ENSLBEG00000002926	si:dkey-34d22.5	100	59.276	ENSCPBG00000011236	-	99	59.276	Chrysemys_picta_bellii
ENSLBEG00000002926	si:dkey-34d22.5	100	76.471	ENSCSEG00000019183	si:dkey-34d22.5	99	76.471	Cynoglossus_semilaevis
ENSLBEG00000002926	si:dkey-34d22.5	100	81.448	ENSCVAG00000017064	si:dkey-34d22.5	99	81.448	Cyprinodon_variegatus
ENSLBEG00000002926	si:dkey-34d22.5	83	49.457	ENSDARG00000100379	si:dkey-34d22.2	98	49.457	Danio_rerio
ENSLBEG00000002926	si:dkey-34d22.5	87	64.583	ENSFALG00000001373	-	89	64.583	Ficedula_albicollis
ENSLBEG00000002926	si:dkey-34d22.5	100	81.081	ENSFHEG00000012041	si:dkey-34d22.5	99	81.081	Fundulus_heteroclitus
ENSLBEG00000002926	si:dkey-34d22.5	87	64.062	ENSGALG00000000994	-	90	64.062	Gallus_gallus
ENSLBEG00000002926	si:dkey-34d22.5	100	81.448	ENSGAFG00000008183	si:dkey-34d22.5	99	81.448	Gambusia_affinis
ENSLBEG00000002926	si:dkey-34d22.5	94	58.654	ENSGAGG00000004918	-	99	58.654	Gopherus_agassizii
ENSLBEG00000002926	si:dkey-34d22.5	100	74.661	ENSHCOG00000015692	si:dkey-34d22.5	99	74.661	Hippocampus_comes
ENSLBEG00000002926	si:dkey-34d22.5	100	83.258	ENSKMAG00000012778	si:dkey-34d22.5	99	83.258	Kryptolebias_marmoratus
ENSLBEG00000002926	si:dkey-34d22.5	99	57.798	ENSLACG00000012674	si:dkey-34d22.5	99	57.798	Latimeria_chalumnae
ENSLBEG00000002926	si:dkey-34d22.5	98	69.585	ENSLOCG00000003467	si:dkey-34d22.5	98	69.585	Lepisosteus_oculatus
ENSLBEG00000002926	si:dkey-34d22.5	100	83.258	ENSMMOG00000006846	si:dkey-34d22.5	99	83.258	Mola_mola
ENSLBEG00000002926	si:dkey-34d22.5	100	80.995	ENSMALG00000013152	si:dkey-34d22.5	99	80.995	Monopterus_albus
ENSLBEG00000002926	si:dkey-34d22.5	100	82.805	ENSORLG00000014099	si:dkey-34d22.5	99	82.805	Oryzias_latipes
ENSLBEG00000002926	si:dkey-34d22.5	100	82.353	ENSORLG00020020277	si:dkey-34d22.5	99	82.353	Oryzias_latipes_hni
ENSLBEG00000002926	si:dkey-34d22.5	100	82.353	ENSORLG00015000142	si:dkey-34d22.5	99	82.353	Oryzias_latipes_hsok
ENSLBEG00000002926	si:dkey-34d22.5	91	87.065	ENSOMEG00000017958	si:dkey-34d22.5	99	83.258	Oryzias_melastigma
ENSLBEG00000002926	si:dkey-34d22.5	99	72.603	ENSPKIG00000021209	si:dkey-34d22.5	95	72.603	Paramormyrops_kingsleyae
ENSLBEG00000002926	si:dkey-34d22.5	92	62.562	ENSPSIG00000006606	-	99	62.562	Pelodiscus_sinensis
ENSLBEG00000002926	si:dkey-34d22.5	100	80.090	ENSPMGG00000001298	-	99	80.090	Periophthalmus_magnuspinnatus
ENSLBEG00000002926	si:dkey-34d22.5	93	60.000	ENSPCIG00000022399	-	91	60.000	Phascolarctos_cinereus
ENSLBEG00000002926	si:dkey-34d22.5	100	81.900	ENSPFOG00000014499	si:dkey-34d22.5	99	81.900	Poecilia_formosa
ENSLBEG00000002926	si:dkey-34d22.5	100	81.900	ENSPLAG00000007773	si:dkey-34d22.5	99	81.900	Poecilia_latipinna
ENSLBEG00000002926	si:dkey-34d22.5	100	81.900	ENSPMEG00000012932	si:dkey-34d22.5	99	81.900	Poecilia_mexicana
ENSLBEG00000002926	si:dkey-34d22.5	89	61.929	ENSSHAG00000008520	-	88	61.929	Sarcophilus_harrisii
ENSLBEG00000002926	si:dkey-34d22.5	99	69.863	ENSSFOG00015012088	rab42	97	69.863	Scleropages_formosus
ENSLBEG00000002926	si:dkey-34d22.5	100	86.878	ENSSLDG00000002646	si:dkey-34d22.5	99	86.878	Seriola_lalandi_dorsalis
ENSLBEG00000002926	si:dkey-34d22.5	100	86.425	ENSSPAG00000012955	si:dkey-34d22.5	99	86.425	Stegastes_partitus
ENSLBEG00000002926	si:dkey-34d22.5	90	50.000	ENSXETG00000020622	rab39a	96	50.000	Xenopus_tropicalis
ENSLBEG00000002926	si:dkey-34d22.5	100	81.448	ENSXCOG00000008410	si:dkey-34d22.5	99	81.448	Xiphophorus_couchianus
ENSLBEG00000002926	si:dkey-34d22.5	100	81.448	ENSXMAG00000029317	si:dkey-34d22.5	99	81.448	Xiphophorus_maculatus