EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000003101 (Gene tree)
Gene ID: 109998351
Gene Symbol: rab4a
Alias: fc93b03|wu:fc93b03
Full Name: RAB4A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 2820 bases
Position: chrFKLU01000001.1:3341387-3344206
Accession: 109998351
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000004042	MMR_HSR1	PF01926.23	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000004253	-	855	XM_020653187	ENSLBEP00000004042	213 (aa)	XP_020508843	UPI00054B5EC3

Gene Model

Click here to download ENSLBEG00000003101's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000003101's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000003101	rab4a	80	53.801	ENSLBEG00000004172	-	77	53.801
ENSLBEG00000003101	rab4a	100	39.070	ENSLBEG00000001313	RAB39B	100	39.070
ENSLBEG00000003101	rab4a	82	37.714	ENSLBEG00000019372	rab6bb	84	37.714
ENSLBEG00000003101	rab4a	99	58.095	ENSLBEG00000026790	-	97	58.095
ENSLBEG00000003101	rab4a	89	44.444	ENSLBEG00000027226	-	77	44.444
ENSLBEG00000003101	rab4a	77	36.310	ENSLBEG00000020582	rab9a	83	36.310
ENSLBEG00000003101	rab4a	83	46.591	ENSLBEG00000021040	rab1ba	88	46.591
ENSLBEG00000003101	rab4a	99	37.619	ENSLBEG00000015149	-	96	37.619
ENSLBEG00000003101	rab4a	54	31.092	ENSLBEG00000017173	arl8	63	31.092
ENSLBEG00000003101	rab4a	72	35.443	ENSLBEG00000018738	-	55	35.443
ENSLBEG00000003101	rab4a	84	37.705	ENSLBEG00000001796	RAB7A	88	37.705
ENSLBEG00000003101	rab4a	74	36.875	ENSLBEG00000026006	rab34a	60	36.875
ENSLBEG00000003101	rab4a	81	32.203	ENSLBEG00000028450	kras	93	32.203
ENSLBEG00000003101	rab4a	100	36.449	ENSLBEG00000026989	RAB15	100	36.449
ENSLBEG00000003101	rab4a	75	35.152	ENSLBEG00000027628	si:cabz01085950.1	81	35.152
ENSLBEG00000003101	rab4a	80	35.429	ENSLBEG00000011478	rab9b	80	35.429
ENSLBEG00000003101	rab4a	76	43.210	ENSLBEG00000001618	rab35b	80	43.210
ENSLBEG00000003101	rab4a	76	40.373	ENSLBEG00000003235	rab22a	83	40.373
ENSLBEG00000003101	rab4a	80	52.047	ENSLBEG00000016417	rab11al	79	52.047
ENSLBEG00000003101	rab4a	100	42.254	ENSLBEG00000028426	RAB1A	99	42.254
ENSLBEG00000003101	rab4a	99	59.048	ENSLBEG00000019435	rab14	97	59.048
ENSLBEG00000003101	rab4a	92	38.776	ENSLBEG00000013463	rab15	92	38.776
ENSLBEG00000003101	rab4a	97	37.443	ENSLBEG00000002926	si:dkey-34d22.5	97	37.443
ENSLBEG00000003101	rab4a	75	36.585	ENSLBEG00000027691	RAB17	71	36.585
ENSLBEG00000003101	rab4a	89	42.708	ENSLBEG00000022630	-	90	42.708
ENSLBEG00000003101	rab4a	77	36.310	ENSLBEG00000005128	-	75	36.310
ENSLBEG00000003101	rab4a	96	33.971	ENSLBEG00000025798	zgc:101559	85	33.971
ENSLBEG00000003101	rab4a	83	45.198	ENSLBEG00000001146	rab30	87	45.198
ENSLBEG00000003101	rab4a	86	43.478	ENSLBEG00000005861	rab18a	85	43.478
ENSLBEG00000003101	rab4a	80	35.795	ENSLBEG00000028391	dnajc27	64	35.795
ENSLBEG00000003101	rab4a	91	33.166	ENSLBEG00000026777	rab33ba	86	33.166
ENSLBEG00000003101	rab4a	81	45.930	ENSLBEG00000026779	rab13	86	45.930
ENSLBEG00000003101	rab4a	80	53.801	ENSLBEG00000015248	rab11bb	77	53.801
ENSLBEG00000003101	rab4a	72	32.468	ENSLBEG00000013176	rab23	78	32.298
ENSLBEG00000003101	rab4a	75	36.585	ENSLBEG00000014427	rab33a	73	36.585
ENSLBEG00000003101	rab4a	91	36.923	ENSLBEG00000001193	rab42a	97	35.545
ENSLBEG00000003101	rab4a	90	44.271	ENSLBEG00000005791	-	86	44.271
ENSLBEG00000003101	rab4a	83	34.595	ENSLBEG00000018812	RAB29	90	34.595
ENSLBEG00000003101	rab4a	76	32.716	ENSLBEG00000001905	hrasb	85	32.716
ENSLBEG00000003101	rab4a	78	40.351	ENSLBEG00000003748	rab6a	82	40.351
ENSLBEG00000003101	rab4a	81	35.227	ENSLBEG00000018180	si:dkey-13a21.4	86	35.227
ENSLBEG00000003101	rab4a	82	38.286	ENSLBEG00000008746	RAB41	83	38.286
ENSLBEG00000003101	rab4a	68	41.333	ENSLBEG00000018063	-	62	41.333
ENSLBEG00000003101	rab4a	52	36.937	ENSLBEG00000003369	-	88	36.937
ENSLBEG00000003101	rab4a	80	45.614	ENSLBEG00000019428	rab18b	83	45.614
ENSLBEG00000003101	rab4a	89	44.737	ENSLBEG00000027781	rab1ab	89	44.737
ENSLBEG00000003101	rab4a	95	38.235	ENSLBEG00000010408	-	88	38.235
ENSLBEG00000003101	rab4a	83	47.727	ENSLBEG00000002367	rab25a	83	47.727
ENSLBEG00000003101	rab4a	61	31.579	ENSLBEG00000006177	arl5c	60	31.579
ENSLBEG00000003101	rab4a	84	37.705	ENSLBEG00000017798	-	88	37.705
ENSLBEG00000003101	rab4a	79	39.645	ENSLBEG00000013756	rab12	70	39.645
ENSLBEG00000003101	rab4a	76	43.478	ENSLBEG00000004128	rab5c	85	40.860
ENSLBEG00000003101	rab4a	97	32.075	ENSLBEG00000005018	rab32b	95	32.075
ENSLBEG00000003101	rab4a	74	40.506	ENSLBEG00000026930	rab6ba	76	40.506
ENSLBEG00000003101	rab4a	75	34.161	ENSLBEG00000003132	rras	85	34.682
ENSLBEG00000003101	rab4a	79	40.476	ENSLBEG00000007681	si:dkey-16l2.16	86	38.889
ENSLBEG00000003101	rab4a	98	45.933	ENSLBEG00000006087	rab11ba	96	45.933
ENSLBEG00000003101	rab4a	80	31.579	ENSLBEG00000003644	rabl2	73	31.579
ENSLBEG00000003101	rab4a	76	42.236	ENSLBEG00000002516	rab5aa	71	42.236
ENSLBEG00000003101	rab4a	80	50.877	ENSLBEG00000005981	-	75	50.877
ENSLBEG00000003101	rab4a	67	34.247	ENSLBEG00000027819	rab34b	73	34.247
ENSLBEG00000003101	rab4a	83	34.595	ENSLBEG00000006152	-	90	34.595
ENSLBEG00000003101	rab4a	96	46.569	ENSLBEG00000026857	rab11a	94	46.569
ENSLBEG00000003101	rab4a	88	57.754	ENSLBEG00000020796	rab2a	84	62.025
ENSLBEG00000003101	rab4a	76	43.827	ENSLBEG00000027539	-	74	43.827
ENSLBEG00000003101	rab4a	72	33.974	ENSLBEG00000019137	rhebl1	79	33.974
ENSLBEG00000003101	rab4a	75	31.056	ENSLBEG00000000119	rras2	85	31.214
ENSLBEG00000003101	rab4a	80	49.412	ENSLBEG00000016446	rab25b	82	49.412

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000003101	rab4a	100	98.592	ENSCVAG00000010727	rab4a	100	98.592	Cyprinodon_variegatus
ENSLBEG00000003101	rab4a	100	95.305	ENSELUG00000014785	rab4a	100	95.305	Esox_lucius
ENSLBEG00000003101	rab4a	100	98.592	ENSFHEG00000010509	rab4a	100	98.592	Fundulus_heteroclitus
ENSLBEG00000003101	rab4a	100	98.122	ENSGAFG00000005477	rab4a	100	98.122	Gambusia_affinis
ENSLBEG00000003101	rab4a	100	99.065	ENSGACG00000016164	rab4a	98	99.065	Gasterosteus_aculeatus
ENSLBEG00000003101	rab4a	100	98.592	ENSKMAG00000020250	rab4a	100	98.592	Kryptolebias_marmoratus
ENSLBEG00000003101	rab4a	100	98.122	ENSMMOG00000015287	rab4a	100	98.122	Mola_mola
ENSLBEG00000003101	rab4a	100	98.122	ENSPFOG00000014630	rab4a	100	98.122	Poecilia_formosa
ENSLBEG00000003101	rab4a	100	98.122	ENSPLAG00000014563	rab4a	100	98.122	Poecilia_latipinna
ENSLBEG00000003101	rab4a	100	98.122	ENSPMEG00000012205	rab4a	100	98.122	Poecilia_mexicana
ENSLBEG00000003101	rab4a	100	98.122	ENSPREG00000010154	rab4a	100	98.122	Poecilia_reticulata
ENSLBEG00000003101	rab4a	100	95.305	ENSSFOG00015015336	rab4a	100	95.305	Scleropages_formosus
ENSLBEG00000003101	rab4a	100	98.122	ENSXMAG00000026193	rab4a	100	98.122	Xiphophorus_maculatus