EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000003104 (Gene tree)
Gene ID: 109989951
Gene Symbol: polr1e
Alias: zgc:112501
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 3611 bases
Position: chrFKLU01000174.1:504355-507965
Accession: 109989951
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000004016	RNA_pol_I_A49	PF06870.12	2.8e-109	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000004226	-	1245	XM_020641862	ENSLBEP00000004016	414 (aa)	XP_020497518	UPI0009B372F3

Gene Model

Click here to download ENSLBEG00000003104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000003104's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000003104	polr1e	99	45.803	ENSG00000137054	POLR1E	99	45.324	Homo_sapiens
ENSLBEG00000003104	polr1e	99	72.048	ENSAPOG00000012452	polr1e	99	72.048	Acanthochromis_polyacanthus
ENSLBEG00000003104	polr1e	99	41.810	ENSAMEG00000010193	POLR1E	97	41.164	Ailuropoda_melanoleuca
ENSLBEG00000003104	polr1e	99	66.187	ENSACIG00000009884	polr1e	99	71.429	Amphilophus_citrinellus
ENSLBEG00000003104	polr1e	99	76.386	ENSAOCG00000005665	polr1e	99	76.386	Amphiprion_ocellaris
ENSLBEG00000003104	polr1e	99	76.867	ENSAPEG00000020581	polr1e	99	76.867	Amphiprion_percula
ENSLBEG00000003104	polr1e	99	80.482	ENSATEG00000020609	polr1e	99	80.482	Anabas_testudineus
ENSLBEG00000003104	polr1e	80	39.474	ENSAPLG00000010340	POLR1E	99	38.947	Anas_platyrhynchos
ENSLBEG00000003104	polr1e	99	45.215	ENSANAG00000038046	POLR1E	99	45.215	Aotus_nancymaae
ENSLBEG00000003104	polr1e	99	77.088	ENSACLG00000013685	polr1e	99	77.088	Astatotilapia_calliptera
ENSLBEG00000003104	polr1e	99	57.452	ENSAMXG00000018181	polr1e	100	57.452	Astyanax_mexicanus
ENSLBEG00000003104	polr1e	99	46.411	ENSBTAG00000012243	POLR1E	99	46.172	Bos_taurus
ENSLBEG00000003104	polr1e	93	44.557	ENSCJAG00000010512	POLR1E	94	46.174	Callithrix_jacchus
ENSLBEG00000003104	polr1e	99	45.215	ENSCAFG00000002377	POLR1E	99	45.215	Canis_familiaris
ENSLBEG00000003104	polr1e	99	45.455	ENSCAFG00020017851	POLR1E	99	45.455	Canis_lupus_dingo
ENSLBEG00000003104	polr1e	97	46.420	ENSCHIG00000019479	POLR1E	97	46.173	Capra_hircus
ENSLBEG00000003104	polr1e	99	44.019	ENSTSYG00000002075	POLR1E	99	44.019	Carlito_syrichta
ENSLBEG00000003104	polr1e	68	43.643	ENSCAPG00000015653	POLR1E	99	43.643	Cavia_aperea
ENSLBEG00000003104	polr1e	99	45.498	ENSCPOG00000009965	POLR1E	100	45.261	Cavia_porcellus
ENSLBEG00000003104	polr1e	99	41.388	ENSCCAG00000029460	POLR1E	99	41.007	Cebus_capucinus
ENSLBEG00000003104	polr1e	99	46.283	ENSCATG00000031732	POLR1E	99	51.327	Cercocebus_atys
ENSLBEG00000003104	polr1e	87	47.671	ENSCLAG00000012701	POLR1E	96	47.671	Chinchilla_lanigera
ENSLBEG00000003104	polr1e	99	46.283	ENSCSAG00000010782	POLR1E	99	46.043	Chlorocebus_sabaeus
ENSLBEG00000003104	polr1e	94	39.295	ENSCHOG00000013024	POLR1E	83	39.098	Choloepus_hoffmanni
ENSLBEG00000003104	polr1e	99	47.470	ENSCPBG00000006923	POLR1E	100	47.470	Chrysemys_picta_bellii
ENSLBEG00000003104	polr1e	99	46.890	ENSCANG00000036112	POLR1E	99	51.724	Colobus_angolensis_palliatus
ENSLBEG00000003104	polr1e	99	44.498	ENSCGRG00001006197	Polr1e	96	44.869	Cricetulus_griseus_chok1gshd
ENSLBEG00000003104	polr1e	99	44.019	ENSCGRG00000006430	Polr1e	96	44.391	Cricetulus_griseus_crigri
ENSLBEG00000003104	polr1e	99	69.952	ENSCSEG00000005121	polr1e	100	68.750	Cynoglossus_semilaevis
ENSLBEG00000003104	polr1e	99	74.940	ENSCVAG00000019759	polr1e	99	74.940	Cyprinodon_variegatus
ENSLBEG00000003104	polr1e	96	59.653	ENSDARG00000006434	polr1e	99	59.277	Danio_rerio
ENSLBEG00000003104	polr1e	98	40.948	ENSDNOG00000010257	POLR1E	99	38.608	Dasypus_novemcinctus
ENSLBEG00000003104	polr1e	82	43.732	ENSETEG00000018204	POLR1E	96	43.732	Echinops_telfairi
ENSLBEG00000003104	polr1e	99	45.933	ENSEASG00005000675	POLR1E	99	45.933	Equus_asinus_asinus
ENSLBEG00000003104	polr1e	99	45.933	ENSECAG00000014669	POLR1E	99	45.933	Equus_caballus
ENSLBEG00000003104	polr1e	94	39.594	ENSEEUG00000011928	POLR1E	84	39.594	Erinaceus_europaeus
ENSLBEG00000003104	polr1e	99	66.826	ENSELUG00000008150	polr1e	99	66.587	Esox_lucius
ENSLBEG00000003104	polr1e	99	45.694	ENSFCAG00000013081	POLR1E	99	45.694	Felis_catus
ENSLBEG00000003104	polr1e	94	46.429	ENSFALG00000012950	POLR1E	99	46.429	Ficedula_albicollis
ENSLBEG00000003104	polr1e	99	47.045	ENSFDAG00000016917	POLR1E	100	47.045	Fukomys_damarensis
ENSLBEG00000003104	polr1e	99	72.115	ENSFHEG00000009801	polr1e	99	71.084	Fundulus_heteroclitus
ENSLBEG00000003104	polr1e	99	55.083	ENSGMOG00000003336	POLR1E	100	55.083	Gadus_morhua
ENSLBEG00000003104	polr1e	96	44.853	ENSGALG00000005395	POLR1E	98	44.665	Gallus_gallus
ENSLBEG00000003104	polr1e	99	72.771	ENSGAFG00000004850	polr1e	99	72.771	Gambusia_affinis
ENSLBEG00000003104	polr1e	99	70.813	ENSGACG00000016087	polr1e	99	70.335	Gasterosteus_aculeatus
ENSLBEG00000003104	polr1e	96	42.822	ENSGAGG00000001659	POLR1E	99	42.410	Gopherus_agassizii
ENSLBEG00000003104	polr1e	99	46.043	ENSGGOG00000001882	POLR1E	99	52.212	Gorilla_gorilla
ENSLBEG00000003104	polr1e	99	77.327	ENSHBUG00000002559	polr1e	99	77.327	Haplochromis_burtoni
ENSLBEG00000003104	polr1e	99	46.682	ENSHGLG00000002036	POLR1E	100	46.682	Heterocephalus_glaber_female
ENSLBEG00000003104	polr1e	99	46.919	ENSHGLG00100012784	POLR1E	100	46.919	Heterocephalus_glaber_male
ENSLBEG00000003104	polr1e	99	71.084	ENSHCOG00000002774	polr1e	99	71.084	Hippocampus_comes
ENSLBEG00000003104	polr1e	99	56.595	ENSIPUG00000003019	polr1e	100	56.355	Ictalurus_punctatus
ENSLBEG00000003104	polr1e	99	45.783	ENSSTOG00000009810	POLR1E	99	45.783	Ictidomys_tridecemlineatus
ENSLBEG00000003104	polr1e	97	46.173	ENSJJAG00000020731	Polr1e	93	46.305	Jaculus_jaculus
ENSLBEG00000003104	polr1e	99	74.699	ENSKMAG00000000046	polr1e	99	74.699	Kryptolebias_marmoratus
ENSLBEG00000003104	polr1e	85	50.278	ENSLACG00000003416	POLR1E	99	50.278	Latimeria_chalumnae
ENSLBEG00000003104	polr1e	99	53.365	ENSLOCG00000012859	polr1e	99	52.885	Lepisosteus_oculatus
ENSLBEG00000003104	polr1e	99	45.933	ENSLAFG00000012831	POLR1E	99	45.933	Loxodonta_africana
ENSLBEG00000003104	polr1e	99	46.283	ENSMFAG00000045465	POLR1E	99	51.327	Macaca_fascicularis
ENSLBEG00000003104	polr1e	99	46.283	ENSMMUG00000017892	POLR1E	99	51.327	Macaca_mulatta
ENSLBEG00000003104	polr1e	99	42.623	ENSMNEG00000040283	POLR1E	94	47.191	Macaca_nemestrina
ENSLBEG00000003104	polr1e	99	46.283	ENSMLEG00000031135	POLR1E	99	51.327	Mandrillus_leucophaeus
ENSLBEG00000003104	polr1e	100	76.190	ENSMAMG00000001260	polr1e	100	76.190	Mastacembelus_armatus
ENSLBEG00000003104	polr1e	99	76.850	ENSMZEG00005021536	polr1e	99	76.850	Maylandia_zebra
ENSLBEG00000003104	polr1e	99	44.498	ENSMAUG00000021044	Polr1e	96	44.630	Mesocricetus_auratus
ENSLBEG00000003104	polr1e	99	45.694	ENSMICG00000003673	POLR1E	99	45.694	Microcebus_murinus
ENSLBEG00000003104	polr1e	99	44.019	ENSMOCG00000012920	Polr1e	96	43.914	Microtus_ochrogaster
ENSLBEG00000003104	polr1e	99	76.923	ENSMMOG00000007391	polr1e	99	76.923	Mola_mola
ENSLBEG00000003104	polr1e	95	46.366	ENSMODG00000002884	POLR1E	98	45.865	Monodelphis_domestica
ENSLBEG00000003104	polr1e	99	78.043	ENSMALG00000002665	polr1e	99	78.043	Monopterus_albus
ENSLBEG00000003104	polr1e	99	44.578	MGP_CAROLIEiJ_G0025967	Polr1e	98	44.557	Mus_caroli
ENSLBEG00000003104	polr1e	99	44.471	ENSMUSG00000028318	Polr1e	97	44.304	Mus_musculus
ENSLBEG00000003104	polr1e	99	45.913	MGP_PahariEiJ_G0024114	Polr1e	97	46.465	Mus_pahari
ENSLBEG00000003104	polr1e	99	45.192	MGP_SPRETEiJ_G0026930	Polr1e	97	45.063	Mus_spretus
ENSLBEG00000003104	polr1e	99	41.453	ENSMPUG00000006040	POLR1E	99	38.380	Mustela_putorius_furo
ENSLBEG00000003104	polr1e	99	46.651	ENSMLUG00000012688	POLR1E	96	46.651	Myotis_lucifugus
ENSLBEG00000003104	polr1e	97	46.667	ENSNGAG00000002520	Polr1e	93	46.420	Nannospalax_galili
ENSLBEG00000003104	polr1e	99	76.850	ENSNBRG00000016822	polr1e	99	76.850	Neolamprologus_brichardi
ENSLBEG00000003104	polr1e	99	46.283	ENSNLEG00000003616	POLR1E	99	51.327	Nomascus_leucogenys
ENSLBEG00000003104	polr1e	72	52.232	ENSMEUG00000015372	-	80	52.232	Notamacropus_eugenii
ENSLBEG00000003104	polr1e	85	40.896	ENSOPRG00000014206	POLR1E	99	40.896	Ochotona_princeps
ENSLBEG00000003104	polr1e	97	47.677	ENSODEG00000014565	POLR1E	94	47.433	Octodon_degus
ENSLBEG00000003104	polr1e	99	77.327	ENSONIG00000008921	polr1e	99	77.327	Oreochromis_niloticus
ENSLBEG00000003104	polr1e	99	45.455	ENSOCUG00000024773	POLR1E	99	45.455	Oryctolagus_cuniculus
ENSLBEG00000003104	polr1e	99	70.602	ENSORLG00000005143	polr1e	99	70.602	Oryzias_latipes
ENSLBEG00000003104	polr1e	92	68.394	ENSORLG00020007271	polr1e	99	68.217	Oryzias_latipes_hni
ENSLBEG00000003104	polr1e	99	70.361	ENSORLG00015000137	polr1e	99	70.361	Oryzias_latipes_hsok
ENSLBEG00000003104	polr1e	99	69.139	ENSOMEG00000013264	polr1e	99	69.139	Oryzias_melastigma
ENSLBEG00000003104	polr1e	99	45.215	ENSOGAG00000012981	POLR1E	97	44.976	Otolemur_garnettii
ENSLBEG00000003104	polr1e	97	46.914	ENSOARG00000011465	POLR1E	93	46.667	Ovis_aries
ENSLBEG00000003104	polr1e	99	45.803	ENSPPAG00000034566	POLR1E	99	51.327	Pan_paniscus
ENSLBEG00000003104	polr1e	99	45.694	ENSPPRG00000005649	POLR1E	99	45.694	Panthera_pardus
ENSLBEG00000003104	polr1e	99	45.694	ENSPTIG00000009774	POLR1E	99	45.694	Panthera_tigris_altaica
ENSLBEG00000003104	polr1e	99	45.803	ENSPTRG00000020944	POLR1E	99	51.327	Pan_troglodytes
ENSLBEG00000003104	polr1e	99	46.283	ENSPANG00000025563	POLR1E	99	51.327	Papio_anubis
ENSLBEG00000003104	polr1e	99	60.047	ENSPKIG00000003562	polr1e	99	60.047	Paramormyrops_kingsleyae
ENSLBEG00000003104	polr1e	97	45.700	ENSPSIG00000003274	POLR1E	95	46.192	Pelodiscus_sinensis
ENSLBEG00000003104	polr1e	94	64.141	ENSPMGG00000024169	polr1e	96	63.384	Periophthalmus_magnuspinnatus
ENSLBEG00000003104	polr1e	99	36.779	ENSPEMG00000022300	-	96	36.779	Peromyscus_maniculatus_bairdii
ENSLBEG00000003104	polr1e	99	44.737	ENSPEMG00000019151	-	96	44.869	Peromyscus_maniculatus_bairdii
ENSLBEG00000003104	polr1e	98	46.715	ENSPCIG00000014798	POLR1E	99	46.229	Phascolarctos_cinereus
ENSLBEG00000003104	polr1e	99	69.526	ENSPFOG00000019627	polr1e	99	69.526	Poecilia_formosa
ENSLBEG00000003104	polr1e	99	73.494	ENSPLAG00000022679	polr1e	99	73.494	Poecilia_latipinna
ENSLBEG00000003104	polr1e	85	74.373	ENSPMEG00000022123	polr1e	93	74.373	Poecilia_mexicana
ENSLBEG00000003104	polr1e	99	72.771	ENSPREG00000009470	polr1e	99	72.771	Poecilia_reticulata
ENSLBEG00000003104	polr1e	99	45.673	ENSPPYG00000019061	POLR1E	99	45.192	Pongo_abelii
ENSLBEG00000003104	polr1e	51	40.187	ENSPCAG00000004891	POLR1E	71	40.187	Procavia_capensis
ENSLBEG00000003104	polr1e	99	45.215	ENSPCOG00000027448	POLR1E	99	45.215	Propithecus_coquereli
ENSLBEG00000003104	polr1e	94	46.329	ENSPVAG00000007940	POLR1E	83	46.076	Pteropus_vampyrus
ENSLBEG00000003104	polr1e	99	77.327	ENSPNYG00000001032	polr1e	99	77.327	Pundamilia_nyererei
ENSLBEG00000003104	polr1e	99	57.767	ENSPNAG00000006987	polr1e	99	57.767	Pygocentrus_nattereri
ENSLBEG00000003104	polr1e	99	44.231	ENSRNOG00000012664	Polr1e	96	44.365	Rattus_norvegicus
ENSLBEG00000003104	polr1e	93	47.208	ENSRBIG00000034214	POLR1E	99	47.745	Rhinopithecus_bieti
ENSLBEG00000003104	polr1e	99	46.283	ENSRROG00000031986	POLR1E	99	51.327	Rhinopithecus_roxellana
ENSLBEG00000003104	polr1e	96	46.287	ENSSBOG00000021415	POLR1E	96	46.287	Saimiri_boliviensis_boliviensis
ENSLBEG00000003104	polr1e	81	47.661	ENSSHAG00000016084	POLR1E	95	47.661	Sarcophilus_harrisii
ENSLBEG00000003104	polr1e	99	59.375	ENSSFOG00015002293	polr1e	100	59.375	Scleropages_formosus
ENSLBEG00000003104	polr1e	99	76.850	ENSSMAG00000011672	polr1e	94	76.850	Scophthalmus_maximus
ENSLBEG00000003104	polr1e	99	78.998	ENSSDUG00000022279	polr1e	99	78.998	Seriola_dumerili
ENSLBEG00000003104	polr1e	99	78.043	ENSSLDG00000024918	polr1e	99	78.043	Seriola_lalandi_dorsalis
ENSLBEG00000003104	polr1e	55	38.961	ENSSARG00000009810	-	58	39.394	Sorex_araneus
ENSLBEG00000003104	polr1e	94	46.803	ENSSPUG00000009499	POLR1E	94	46.803	Sphenodon_punctatus
ENSLBEG00000003104	polr1e	99	78.554	ENSSPAG00000021240	polr1e	99	78.554	Stegastes_partitus
ENSLBEG00000003104	polr1e	99	44.976	ENSSSCG00000005347	POLR1E	99	44.737	Sus_scrofa
ENSLBEG00000003104	polr1e	94	39.593	ENSTGUG00000007169	POLR1E	84	50.562	Taeniopygia_guttata
ENSLBEG00000003104	polr1e	99	70.024	ENSTRUG00000020779	polr1e	100	70.024	Takifugu_rubripes
ENSLBEG00000003104	polr1e	99	71.223	ENSTNIG00000017812	polr1e	100	71.223	Tetraodon_nigroviridis
ENSLBEG00000003104	polr1e	99	46.172	ENSTBEG00000013786	POLR1E	88	46.172	Tupaia_belangeri
ENSLBEG00000003104	polr1e	94	45.477	ENSTTRG00000008294	POLR1E	85	45.614	Tursiops_truncatus
ENSLBEG00000003104	polr1e	99	45.933	ENSUAMG00000012474	POLR1E	100	47.411	Ursus_americanus
ENSLBEG00000003104	polr1e	99	45.933	ENSUMAG00000011496	POLR1E	99	46.172	Ursus_maritimus
ENSLBEG00000003104	polr1e	87	41.209	ENSVPAG00000009048	POLR1E	84	41.096	Vicugna_pacos
ENSLBEG00000003104	polr1e	99	45.215	ENSVVUG00000019954	POLR1E	99	45.215	Vulpes_vulpes
ENSLBEG00000003104	polr1e	99	43.645	ENSXETG00000006533	polr1e	99	43.165	Xenopus_tropicalis
ENSLBEG00000003104	polr1e	99	69.157	ENSXCOG00000013706	polr1e	99	69.157	Xiphophorus_couchianus
ENSLBEG00000003104	polr1e	99	74.699	ENSXMAG00000012484	polr1e	99	74.699	Xiphophorus_maculatus