EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000003163 (Gene tree)
Gene ID: 109994060
Gene Symbol: sfpq
Alias: hm:zeh0027|wis|wu:fa11h12|wu:fd10f03|zgc:85935
Full Name: splicing factor%2C proline- and glutamine-rich-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 7049 bases
Position: chrFKLU01000278.1:108957-116005
Accession: 109994060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000004098	RRM_1	PF00076.22	1.6e-30	1	2
ENSLBEP00000004098	RRM_1	PF00076.22	1.6e-30	2	2
ENSLBEP00000004114	RRM_1	PF00076.22	1.7e-30	1	2
ENSLBEP00000004114	RRM_1	PF00076.22	1.7e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000004328	-	2118	-	ENSLBEP00000004114	705 (aa)	-	-
ENSLBET00000004312	-	2103	XM_020647221	ENSLBEP00000004098	700 (aa)	XP_020502877	-

Gene Model

Click here to download ENSLBEG00000003163's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000003163's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000003163	sfpq	58	54.333	ENSLBEG00000004474	pspc1	67	61.587
ENSLBEG00000003163	sfpq	59	59.472	ENSLBEG00000022623	nono	88	63.939

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000003163	sfpq	57	73.206	ENSG00000116560	SFPQ	83	77.005	Homo_sapiens
ENSLBEG00000003163	sfpq	66	82.581	ENSAPOG00000024257	sfpq	100	71.165	Acanthochromis_polyacanthus
ENSLBEG00000003163	sfpq	56	73.798	ENSAMEG00000000815	SFPQ	95	75.179	Ailuropoda_melanoleuca
ENSLBEG00000003163	sfpq	82	84.091	ENSACIG00000000905	sfpq	99	81.509	Amphilophus_citrinellus
ENSLBEG00000003163	sfpq	67	82.452	ENSAOCG00000002889	sfpq	100	70.954	Amphiprion_ocellaris
ENSLBEG00000003163	sfpq	67	82.452	ENSAPEG00000016556	sfpq	100	70.954	Amphiprion_percula
ENSLBEG00000003163	sfpq	98	72.468	ENSATEG00000002981	sfpq	100	71.019	Anabas_testudineus
ENSLBEG00000003163	sfpq	53	66.412	ENSANAG00000027438	-	64	64.467	Aotus_nancymaae
ENSLBEG00000003163	sfpq	98	69.645	ENSACLG00000022332	sfpq	100	69.417	Astatotilapia_calliptera
ENSLBEG00000003163	sfpq	57	80.292	ENSAMXG00000011538	sfpq	64	78.860	Astyanax_mexicanus
ENSLBEG00000003163	sfpq	57	68.585	ENSCAFG00000017608	-	61	71.053	Canis_familiaris
ENSLBEG00000003163	sfpq	61	68.444	ENSCAFG00000018271	-	71	66.116	Canis_familiaris
ENSLBEG00000003163	sfpq	57	73.206	ENSCAFG00000003595	-	66	73.502	Canis_familiaris
ENSLBEG00000003163	sfpq	61	68.444	ENSCAFG00020004881	-	69	67.019	Canis_lupus_dingo
ENSLBEG00000003163	sfpq	57	73.206	ENSCHIG00000023097	SFPQ	61	73.502	Capra_hircus
ENSLBEG00000003163	sfpq	57	73.206	ENSCCAG00000029361	-	87	58.560	Cebus_capucinus
ENSLBEG00000003163	sfpq	51	78.571	ENSCPBG00000018674	SFPQ	74	68.454	Chrysemys_picta_bellii
ENSLBEG00000003163	sfpq	56	73.671	ENSCGRG00000010128	Sfpq	92	75.721	Cricetulus_griseus_crigri
ENSLBEG00000003163	sfpq	98	67.575	ENSCSEG00000007852	sfpq	100	64.347	Cynoglossus_semilaevis
ENSLBEG00000003163	sfpq	98	59.533	ENSCVAG00000019538	sfpq	98	57.726	Cyprinodon_variegatus
ENSLBEG00000003163	sfpq	57	79.951	ENSDARG00000011564	sfpq	100	89.565	Danio_rerio
ENSLBEG00000003163	sfpq	56	66.747	ENSETEG00000001095	SFPQ	61	61.758	Echinops_telfairi
ENSLBEG00000003163	sfpq	60	79.391	ENSELUG00000023145	sfpq	68	79.529	Esox_lucius
ENSLBEG00000003163	sfpq	98	59.631	ENSFHEG00000015200	sfpq	70	80.435	Fundulus_heteroclitus
ENSLBEG00000003163	sfpq	76	88.119	ENSGMOG00000011950	SFPQ	93	87.532	Gadus_morhua
ENSLBEG00000003163	sfpq	56	87.032	ENSGMOG00000011957	sfpq	65	84.375	Gadus_morhua
ENSLBEG00000003163	sfpq	57	72.600	ENSGALG00000002514	SFPQ	85	61.578	Gallus_gallus
ENSLBEG00000003163	sfpq	93	66.032	ENSGAFG00000014571	sfpq	100	63.815	Gambusia_affinis
ENSLBEG00000003163	sfpq	98	74.138	ENSGACG00000002034	sfpq	100	71.491	Gasterosteus_aculeatus
ENSLBEG00000003163	sfpq	57	73.206	ENSGGOG00000026354	SFPQ	96	73.887	Gorilla_gorilla
ENSLBEG00000003163	sfpq	98	69.645	ENSHBUG00000016818	sfpq	100	69.417	Haplochromis_burtoni
ENSLBEG00000003163	sfpq	98	63.576	ENSHCOG00000008612	sfpq	82	78.723	Hippocampus_comes
ENSLBEG00000003163	sfpq	58	78.673	ENSIPUG00000013076	SFPQ	74	75.688	Ictalurus_punctatus
ENSLBEG00000003163	sfpq	98	61.893	ENSKMAG00000000238	sfpq	58	77.701	Kryptolebias_marmoratus
ENSLBEG00000003163	sfpq	57	73.397	ENSLACG00000014728	SFPQ	68	73.643	Latimeria_chalumnae
ENSLBEG00000003163	sfpq	73	67.105	ENSLOCG00000001067	sfpq	64	85.515	Lepisosteus_oculatus
ENSLBEG00000003163	sfpq	96	73.099	ENSMAMG00000007875	sfpq	100	71.041	Mastacembelus_armatus
ENSLBEG00000003163	sfpq	98	71.571	ENSMZEG00005026091	sfpq	100	69.297	Maylandia_zebra
ENSLBEG00000003163	sfpq	56	73.494	ENSMICG00000027265	SFPQ	84	58.699	Microcebus_murinus
ENSLBEG00000003163	sfpq	58	69.647	ENSMOCG00000019075	Sfpq	89	70.968	Microtus_ochrogaster
ENSLBEG00000003163	sfpq	98	73.247	ENSMMOG00000001074	sfpq	100	70.613	Mola_mola
ENSLBEG00000003163	sfpq	57	74.880	ENSMODG00000017937	SFPQ	64	73.441	Monodelphis_domestica
ENSLBEG00000003163	sfpq	96	72.206	ENSMALG00000010381	sfpq	100	70.173	Monopterus_albus
ENSLBEG00000003163	sfpq	56	73.494	ENSMLUG00000027090	SFPQ	93	75.481	Myotis_lucifugus
ENSLBEG00000003163	sfpq	98	69.814	ENSNBRG00000017479	sfpq	100	69.871	Neolamprologus_brichardi
ENSLBEG00000003163	sfpq	57	75.240	ENSMEUG00000014082	SFPQ	64	71.335	Notamacropus_eugenii
ENSLBEG00000003163	sfpq	61	69.710	ENSOPRG00000013696	SFPQ	66	70.108	Ochotona_princeps
ENSLBEG00000003163	sfpq	57	66.425	ENSODEG00000005485	SFPQ	76	66.908	Octodon_degus
ENSLBEG00000003163	sfpq	98	70.128	ENSONIG00000017737	sfpq	100	69.822	Oreochromis_niloticus
ENSLBEG00000003163	sfpq	57	73.206	ENSOCUG00000001877	SFPQ	85	73.502	Oryctolagus_cuniculus
ENSLBEG00000003163	sfpq	98	66.532	ENSORLG00000007459	sfpq	100	63.624	Oryzias_latipes
ENSLBEG00000003163	sfpq	98	66.846	ENSORLG00020011818	sfpq	100	64.595	Oryzias_latipes_hni
ENSLBEG00000003163	sfpq	98	66.712	ENSORLG00015002131	sfpq	100	64.324	Oryzias_latipes_hsok
ENSLBEG00000003163	sfpq	98	67.867	ENSOMEG00000018020	sfpq	100	63.685	Oryzias_melastigma
ENSLBEG00000003163	sfpq	57	74.940	ENSOGAG00000027710	SFPQ	82	73.733	Otolemur_garnettii
ENSLBEG00000003163	sfpq	56	73.494	ENSOARG00000019439	SFPQ	63	74.519	Ovis_aries
ENSLBEG00000003163	sfpq	57	67.225	ENSPTRG00000000518	SFPQ	60	67.742	Pan_troglodytes
ENSLBEG00000003163	sfpq	57	73.206	ENSPANG00000005380	SFPQ	64	73.502	Papio_anubis
ENSLBEG00000003163	sfpq	54	81.282	ENSPKIG00000023035	sfpq	73	78.538	Paramormyrops_kingsleyae
ENSLBEG00000003163	sfpq	56	75.240	ENSPSIG00000011494	SFPQ	96	74.038	Pelodiscus_sinensis
ENSLBEG00000003163	sfpq	64	79.177	ENSPMGG00000023883	sfpq	84	63.815	Periophthalmus_magnuspinnatus
ENSLBEG00000003163	sfpq	58	72.471	ENSPEMG00000009794	Sfpq	91	71.619	Peromyscus_maniculatus_bairdii
ENSLBEG00000003163	sfpq	53	79.301	ENSPCIG00000000923	SFPQ	59	77.320	Phascolarctos_cinereus
ENSLBEG00000003163	sfpq	94	63.537	ENSPFOG00000003127	sfpq	93	74.661	Poecilia_formosa
ENSLBEG00000003163	sfpq	94	64.548	ENSPREG00000008060	sfpq	67	72.211	Poecilia_reticulata
ENSLBEG00000003163	sfpq	56	72.947	ENSPCAG00000006164	SFPQ	60	73.256	Procavia_capensis
ENSLBEG00000003163	sfpq	98	69.004	ENSPNYG00000007494	sfpq	100	69.242	Pundamilia_nyererei
ENSLBEG00000003163	sfpq	55	82.564	ENSPNAG00000002128	sfpq	71	79.196	Pygocentrus_nattereri
ENSLBEG00000003163	sfpq	56	67.542	ENSRBIG00000035286	SFPQ	96	73.887	Rhinopithecus_bieti
ENSLBEG00000003163	sfpq	57	73.206	ENSRROG00000040992	SFPQ	96	73.887	Rhinopithecus_roxellana
ENSLBEG00000003163	sfpq	53	77.202	ENSSHAG00000016107	-	93	71.065	Sarcophilus_harrisii
ENSLBEG00000003163	sfpq	57	81.707	ENSSFOG00015009289	sfpq	81	78.829	Scleropages_formosus
ENSLBEG00000003163	sfpq	64	85.714	ENSSMAG00000018201	sfpq	98	72.674	Scophthalmus_maximus
ENSLBEG00000003163	sfpq	98	74.143	ENSSDUG00000008402	sfpq	100	71.861	Seriola_dumerili
ENSLBEG00000003163	sfpq	98	73.429	ENSSLDG00000018917	sfpq	100	72.150	Seriola_lalandi_dorsalis
ENSLBEG00000003163	sfpq	96	74.047	ENSSPAG00000016550	sfpq	100	72.126	Stegastes_partitus
ENSLBEG00000003163	sfpq	56	73.747	ENSTGUG00000001722	SFPQ	99	71.230	Taeniopygia_guttata
ENSLBEG00000003163	sfpq	98	73.039	ENSTRUG00000003783	sfpq	100	70.935	Takifugu_rubripes
ENSLBEG00000003163	sfpq	86	72.846	ENSTNIG00000011331	sfpq	93	75.342	Tetraodon_nigroviridis
ENSLBEG00000003163	sfpq	57	72.488	ENSTTRG00000013930	SFPQ	67	65.696	Tursiops_truncatus
ENSLBEG00000003163	sfpq	56	74.257	ENSXETG00000009682	sfpq	97	81.534	Xenopus_tropicalis
ENSLBEG00000003163	sfpq	93	66.763	ENSXMAG00000016391	sfpq	99	63.610	Xiphophorus_maculatus