EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000003543 (Gene tree)
Gene ID: -
Gene Symbol: crnkl1
Alias: zgc:55327
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 8481 bases
Position: chrFKLU01001477.1:21072-29552
Accession: 110004284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000004626	HAT	PF02184.16	8.4e-30	1	2
ENSLBEP00000004626	HAT	PF02184.16	8.4e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000004880	-	1959	XM_020659833	ENSLBEP00000004626	652 (aa)	XP_020515489	-

Gene Model

Click here to download ENSLBEG00000003543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000003543's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000003543	crnkl1	91	71.239	ENSG00000101343	CRNKL1	97	70.877	Homo_sapiens
ENSLBEG00000003543	crnkl1	93	76.801	ENSAPOG00000009705	crnkl1	97	73.126	Acanthochromis_polyacanthus
ENSLBEG00000003543	crnkl1	91	71.134	ENSAMEG00000000270	CRNKL1	80	71.280	Ailuropoda_melanoleuca
ENSLBEG00000003543	crnkl1	94	76.768	ENSACIG00000015267	crnkl1	89	77.198	Amphilophus_citrinellus
ENSLBEG00000003543	crnkl1	93	76.513	ENSAOCG00000021964	crnkl1	92	74.608	Amphiprion_ocellaris
ENSLBEG00000003543	crnkl1	93	77.168	ENSAPEG00000015041	crnkl1	91	72.578	Amphiprion_percula
ENSLBEG00000003543	crnkl1	93	76.623	ENSATEG00000001068	crnkl1	90	72.445	Anabas_testudineus
ENSLBEG00000003543	crnkl1	92	69.489	ENSAPLG00000013105	CRNKL1	97	69.288	Anas_platyrhynchos
ENSLBEG00000003543	crnkl1	92	71.533	ENSACAG00000005284	CRNKL1	97	71.513	Anolis_carolinensis
ENSLBEG00000003543	crnkl1	84	71.111	ENSANAG00000024889	CRNKL1	99	70.016	Aotus_nancymaae
ENSLBEG00000003543	crnkl1	96	72.867	ENSACLG00000010813	crnkl1	94	72.028	Astatotilapia_calliptera
ENSLBEG00000003543	crnkl1	89	74.737	ENSAMXG00000018334	crnkl1	90	73.591	Astyanax_mexicanus
ENSLBEG00000003543	crnkl1	93	70.563	ENSBTAG00000008472	CRNKL1	96	71.025	Bos_taurus
ENSLBEG00000003543	crnkl1	85	50.308	WBGene00019762	M03F8.3	88	48.718	Caenorhabditis_elegans
ENSLBEG00000003543	crnkl1	93	70.827	ENSCJAG00000005393	CRNKL1	97	71.174	Callithrix_jacchus
ENSLBEG00000003543	crnkl1	91	71.134	ENSCAFG00000005333	CRNKL1	91	71.025	Canis_familiaris
ENSLBEG00000003543	crnkl1	92	71.345	ENSCAFG00020027488	CRNKL1	97	71.025	Canis_lupus_dingo
ENSLBEG00000003543	crnkl1	93	70.605	ENSCHIG00000013171	CRNKL1	96	71.174	Capra_hircus
ENSLBEG00000003543	crnkl1	92	73.421	ENSTSYG00000004197	CRNKL1	97	70.728	Carlito_syrichta
ENSLBEG00000003543	crnkl1	85	67.909	ENSCAPG00000010501	CRNKL1	96	67.657	Cavia_aperea
ENSLBEG00000003543	crnkl1	92	70.760	ENSCPOG00000004418	CRNKL1	97	70.579	Cavia_porcellus
ENSLBEG00000003543	crnkl1	93	70.972	ENSCCAG00000027037	CRNKL1	97	71.174	Cebus_capucinus
ENSLBEG00000003543	crnkl1	91	71.239	ENSCATG00000034247	CRNKL1	97	70.877	Cercocebus_atys
ENSLBEG00000003543	crnkl1	92	72.661	ENSCLAG00000013859	CRNKL1	97	70.877	Chinchilla_lanigera
ENSLBEG00000003543	crnkl1	91	71.239	ENSCSAG00000011434	CRNKL1	97	70.877	Chlorocebus_sabaeus
ENSLBEG00000003543	crnkl1	91	70.944	ENSCHOG00000006371	CRNKL1	81	70.833	Choloepus_hoffmanni
ENSLBEG00000003543	crnkl1	92	71.679	ENSCPBG00000023501	CRNKL1	97	71.217	Chrysemys_picta_bellii
ENSLBEG00000003543	crnkl1	89	55.887	ENSCING00000002709	-	97	55.887	Ciona_intestinalis
ENSLBEG00000003543	crnkl1	91	71.239	ENSCANG00000038789	CRNKL1	97	70.877	Colobus_angolensis_palliatus
ENSLBEG00000003543	crnkl1	92	72.661	ENSCGRG00001000687	-	97	70.728	Cricetulus_griseus_chok1gshd
ENSLBEG00000003543	crnkl1	92	72.661	ENSCGRG00001001115	-	97	70.728	Cricetulus_griseus_chok1gshd
ENSLBEG00000003543	crnkl1	92	72.661	ENSCGRG00000007854	Crnkl1	97	70.728	Cricetulus_griseus_crigri
ENSLBEG00000003543	crnkl1	90	75.405	ENSCSEG00000005594	crnkl1	85	76.226	Cynoglossus_semilaevis
ENSLBEG00000003543	crnkl1	89	75.519	ENSCVAG00000015172	crnkl1	90	75.929	Cyprinodon_variegatus
ENSLBEG00000003543	crnkl1	92	71.004	ENSDARG00000007901	crnkl1	89	72.849	Danio_rerio
ENSLBEG00000003543	crnkl1	92	71.053	ENSDNOG00000016226	CRNKL1	92	70.728	Dasypus_novemcinctus
ENSLBEG00000003543	crnkl1	89	64.583	ENSDORG00000030174	-	99	64.583	Dipodomys_ordii
ENSLBEG00000003543	crnkl1	92	69.710	ENSDORG00000000394	-	97	69.219	Dipodomys_ordii
ENSLBEG00000003543	crnkl1	89	65.075	ENSDORG00000023724	-	98	64.627	Dipodomys_ordii
ENSLBEG00000003543	crnkl1	88	57.808	FBgn0000377	crn	98	56.585	Drosophila_melanogaster
ENSLBEG00000003543	crnkl1	93	80.311	ENSETEG00000003711	CRNKL1	74	80.311	Echinops_telfairi
ENSLBEG00000003543	crnkl1	63	44.422	ENSEBUG00000013461	crnkl1	94	59.180	Eptatretus_burgeri
ENSLBEG00000003543	crnkl1	92	71.345	ENSEASG00005002072	CRNKL1	97	71.025	Equus_asinus_asinus
ENSLBEG00000003543	crnkl1	92	71.345	ENSECAG00000022215	CRNKL1	97	71.025	Equus_caballus
ENSLBEG00000003543	crnkl1	91	69.956	ENSEEUG00000000413	CRNKL1	90	61.642	Erinaceus_europaeus
ENSLBEG00000003543	crnkl1	89	74.925	ENSELUG00000015424	crnkl1	94	73.403	Esox_lucius
ENSLBEG00000003543	crnkl1	92	71.345	ENSFCAG00000000714	CRNKL1	97	71.025	Felis_catus
ENSLBEG00000003543	crnkl1	90	69.598	ENSFALG00000004611	CRNKL1	97	60.578	Ficedula_albicollis
ENSLBEG00000003543	crnkl1	92	71.053	ENSFDAG00000000604	CRNKL1	97	70.877	Fukomys_damarensis
ENSLBEG00000003543	crnkl1	90	75.073	ENSFHEG00000013163	crnkl1	91	73.870	Fundulus_heteroclitus
ENSLBEG00000003543	crnkl1	90	74.627	ENSGMOG00000007609	crnkl1	93	73.708	Gadus_morhua
ENSLBEG00000003543	crnkl1	92	70.803	ENSGALG00000008429	CRNKL1	97	70.623	Gallus_gallus
ENSLBEG00000003543	crnkl1	89	82.000	ENSGAFG00000014249	crnkl1	86	82.000	Gambusia_affinis
ENSLBEG00000003543	crnkl1	94	75.887	ENSGACG00000011852	crnkl1	89	75.781	Gasterosteus_aculeatus
ENSLBEG00000003543	crnkl1	88	70.561	ENSGAGG00000021233	CRNKL1	97	70.295	Gopherus_agassizii
ENSLBEG00000003543	crnkl1	91	71.239	ENSGGOG00000014176	CRNKL1	97	70.877	Gorilla_gorilla
ENSLBEG00000003543	crnkl1	96	72.867	ENSHBUG00000005246	crnkl1	93	72.028	Haplochromis_burtoni
ENSLBEG00000003543	crnkl1	92	71.053	ENSHGLG00000010856	CRNKL1	97	70.877	Heterocephalus_glaber_female
ENSLBEG00000003543	crnkl1	92	71.053	ENSHGLG00100011521	CRNKL1	97	70.877	Heterocephalus_glaber_male
ENSLBEG00000003543	crnkl1	89	73.887	ENSHCOG00000006420	crnkl1	77	70.201	Hippocampus_comes
ENSLBEG00000003543	crnkl1	91	64.006	ENSIPUG00000006836	-	97	63.885	Ictalurus_punctatus
ENSLBEG00000003543	crnkl1	86	74.268	ENSIPUG00000006751	crnkl1	90	73.404	Ictalurus_punctatus
ENSLBEG00000003543	crnkl1	84	61.338	ENSIPUG00000000315	-	99	57.236	Ictalurus_punctatus
ENSLBEG00000003543	crnkl1	92	71.199	ENSSTOG00000014747	CRNKL1	97	70.728	Ictidomys_tridecemlineatus
ENSLBEG00000003543	crnkl1	92	69.286	ENSJJAG00000016926	Crnkl1	97	69.086	Jaculus_jaculus
ENSLBEG00000003543	crnkl1	93	73.963	ENSKMAG00000003620	crnkl1	85	74.612	Kryptolebias_marmoratus
ENSLBEG00000003543	crnkl1	93	72.174	ENSLACG00000001129	CRNKL1	98	72.700	Latimeria_chalumnae
ENSLBEG00000003543	crnkl1	89	75.038	ENSLOCG00000016889	crnkl1	93	73.887	Lepisosteus_oculatus
ENSLBEG00000003543	crnkl1	92	70.219	ENSLAFG00000004512	CRNKL1	97	69.733	Loxodonta_africana
ENSLBEG00000003543	crnkl1	91	71.239	ENSMFAG00000039893	CRNKL1	97	70.877	Macaca_fascicularis
ENSLBEG00000003543	crnkl1	91	71.239	ENSMMUG00000007709	CRNKL1	97	70.877	Macaca_mulatta
ENSLBEG00000003543	crnkl1	91	71.239	ENSMNEG00000037490	CRNKL1	97	70.877	Macaca_nemestrina
ENSLBEG00000003543	crnkl1	91	71.239	ENSMLEG00000034885	CRNKL1	97	70.877	Mandrillus_leucophaeus
ENSLBEG00000003543	crnkl1	93	76.012	ENSMAMG00000008757	crnkl1	88	72.395	Mastacembelus_armatus
ENSLBEG00000003543	crnkl1	96	72.867	ENSMZEG00005022345	crnkl1	94	72.028	Maylandia_zebra
ENSLBEG00000003543	crnkl1	92	70.262	ENSMGAG00000003452	CRNKL1	92	69.333	Meleagris_gallopavo
ENSLBEG00000003543	crnkl1	92	72.661	ENSMAUG00000020764	Crnkl1	97	70.728	Mesocricetus_auratus
ENSLBEG00000003543	crnkl1	92	71.053	ENSMICG00000006048	CRNKL1	97	71.025	Microcebus_murinus
ENSLBEG00000003543	crnkl1	88	57.323	ENSMOCG00000004179	-	95	55.329	Microtus_ochrogaster
ENSLBEG00000003543	crnkl1	92	62.931	ENSMOCG00000000681	-	96	62.482	Microtus_ochrogaster
ENSLBEG00000003543	crnkl1	84	77.373	ENSMMOG00000017601	crnkl1	97	72.993	Mola_mola
ENSLBEG00000003543	crnkl1	92	64.306	ENSMODG00000010857	-	97	65.527	Monodelphis_domestica
ENSLBEG00000003543	crnkl1	92	68.831	ENSMODG00000005961	-	96	68.475	Monodelphis_domestica
ENSLBEG00000003543	crnkl1	93	64.388	ENSMALG00000011211	crnkl1	90	64.547	Monopterus_albus
ENSLBEG00000003543	crnkl1	93	70.478	MGP_CAROLIEiJ_G0024394	Crnkl1	97	70.431	Mus_caroli
ENSLBEG00000003543	crnkl1	92	72.661	ENSMUSG00000001767	Crnkl1	97	70.431	Mus_musculus
ENSLBEG00000003543	crnkl1	92	71.637	MGP_PahariEiJ_G0025838	Crnkl1	97	69.391	Mus_pahari
ENSLBEG00000003543	crnkl1	92	72.661	MGP_SPRETEiJ_G0025312	Crnkl1	97	70.431	Mus_spretus
ENSLBEG00000003543	crnkl1	92	71.345	ENSMPUG00000001226	CRNKL1	97	71.025	Mustela_putorius_furo
ENSLBEG00000003543	crnkl1	91	70.588	ENSMLUG00000016513	CRNKL1	86	70.475	Myotis_lucifugus
ENSLBEG00000003543	crnkl1	92	69.727	ENSNGAG00000023097	Crnkl1	97	69.242	Nannospalax_galili
ENSLBEG00000003543	crnkl1	96	73.007	ENSNBRG00000007867	crnkl1	93	72.168	Neolamprologus_brichardi
ENSLBEG00000003543	crnkl1	91	72.048	ENSNLEG00000009862	CRNKL1	97	70.210	Nomascus_leucogenys
ENSLBEG00000003543	crnkl1	89	70.808	ENSMEUG00000012167	-	97	70.365	Notamacropus_eugenii
ENSLBEG00000003543	crnkl1	91	58.272	ENSMEUG00000002361	-	97	65.430	Notamacropus_eugenii
ENSLBEG00000003543	crnkl1	66	50.505	ENSOPRG00000009242	-	61	50.505	Ochotona_princeps
ENSLBEG00000003543	crnkl1	92	71.053	ENSODEG00000012175	CRNKL1	97	70.728	Octodon_degus
ENSLBEG00000003543	crnkl1	93	74.322	ENSONIG00000018728	crnkl1	99	73.181	Oreochromis_niloticus
ENSLBEG00000003543	crnkl1	91	69.941	ENSOCUG00000015484	CRNKL1	80	70.222	Oryctolagus_cuniculus
ENSLBEG00000003543	crnkl1	94	80.689	ENSORLG00000017240	crnkl1	94	79.160	Oryzias_latipes
ENSLBEG00000003543	crnkl1	93	74.465	ENSORLG00020001742	crnkl1	90	74.815	Oryzias_latipes_hni
ENSLBEG00000003543	crnkl1	93	73.247	ENSORLG00015019564	crnkl1	89	74.815	Oryzias_latipes_hsok
ENSLBEG00000003543	crnkl1	93	76.301	ENSOMEG00000019895	crnkl1	92	74.928	Oryzias_melastigma
ENSLBEG00000003543	crnkl1	92	70.906	ENSOGAG00000011544	CRNKL1	97	70.877	Otolemur_garnettii
ENSLBEG00000003543	crnkl1	93	70.247	ENSOARG00000002150	CRNKL1	87	71.280	Ovis_aries
ENSLBEG00000003543	crnkl1	90	71.280	ENSPPAG00000027847	CRNKL1	81	71.131	Pan_paniscus
ENSLBEG00000003543	crnkl1	92	71.345	ENSPPRG00000001955	CRNKL1	97	71.025	Panthera_pardus
ENSLBEG00000003543	crnkl1	92	71.345	ENSPTIG00000007393	CRNKL1	97	71.025	Panthera_tigris_altaica
ENSLBEG00000003543	crnkl1	91	75.038	ENSPTRG00000030609	CRNKL1	97	75.957	Pan_troglodytes
ENSLBEG00000003543	crnkl1	90	74.735	ENSPANG00000017420	CRNKL1	97	70.877	Papio_anubis
ENSLBEG00000003543	crnkl1	89	71.622	ENSPKIG00000017093	crnkl1	87	70.310	Paramormyrops_kingsleyae
ENSLBEG00000003543	crnkl1	92	70.528	ENSPSIG00000012705	CRNKL1	97	70.045	Pelodiscus_sinensis
ENSLBEG00000003543	crnkl1	92	75.038	ENSPMGG00000006263	crnkl1	95	75.422	Periophthalmus_magnuspinnatus
ENSLBEG00000003543	crnkl1	92	72.807	ENSPEMG00000000073	-	96	70.579	Peromyscus_maniculatus_bairdii
ENSLBEG00000003543	crnkl1	92	66.667	ENSPMAG00000002250	crnkl1	97	67.704	Petromyzon_marinus
ENSLBEG00000003543	crnkl1	92	79.777	ENSPCIG00000025825	CRNKL1	97	81.311	Phascolarctos_cinereus
ENSLBEG00000003543	crnkl1	89	75.074	ENSPFOG00000005102	crnkl1	90	75.074	Poecilia_formosa
ENSLBEG00000003543	crnkl1	89	75.074	ENSPLAG00000007288	crnkl1	90	73.963	Poecilia_latipinna
ENSLBEG00000003543	crnkl1	89	75.223	ENSPMEG00000008865	crnkl1	91	75.483	Poecilia_mexicana
ENSLBEG00000003543	crnkl1	89	85.323	ENSPREG00000012615	crnkl1	89	85.323	Poecilia_reticulata
ENSLBEG00000003543	crnkl1	90	71.025	ENSPPYG00000010747	CRNKL1	79	70.877	Pongo_abelii
ENSLBEG00000003543	crnkl1	92	64.689	ENSPCAG00000003296	CRNKL1	83	75.532	Procavia_capensis
ENSLBEG00000003543	crnkl1	92	69.679	ENSPCOG00000017608	CRNKL1	81	70.074	Propithecus_coquereli
ENSLBEG00000003543	crnkl1	91	70.839	ENSPVAG00000006207	CRNKL1	81	71.131	Pteropus_vampyrus
ENSLBEG00000003543	crnkl1	96	72.727	ENSPNYG00000001977	crnkl1	93	71.888	Pundamilia_nyererei
ENSLBEG00000003543	crnkl1	94	72.399	ENSPNAG00000001507	crnkl1	96	77.108	Pygocentrus_nattereri
ENSLBEG00000003543	crnkl1	92	72.661	ENSRNOG00000040045	Crnkl1	97	70.431	Rattus_norvegicus
ENSLBEG00000003543	crnkl1	92	72.661	ENSRNOG00000010587	Crnkl1	97	70.431	Rattus_norvegicus
ENSLBEG00000003543	crnkl1	91	71.239	ENSRBIG00000031770	CRNKL1	97	70.877	Rhinopithecus_bieti
ENSLBEG00000003543	crnkl1	91	71.386	ENSRROG00000040450	CRNKL1	97	71.025	Rhinopithecus_roxellana
ENSLBEG00000003543	crnkl1	86	30.303	YLR117C	CLF1	82	31.864	Saccharomyces_cerevisiae
ENSLBEG00000003543	crnkl1	93	70.827	ENSSBOG00000029672	CRNKL1	97	71.174	Saimiri_boliviensis_boliviensis
ENSLBEG00000003543	crnkl1	88	60.794	ENSSHAG00000011199	CRNKL1	99	60.863	Sarcophilus_harrisii
ENSLBEG00000003543	crnkl1	89	75.867	ENSSFOG00015000946	crnkl1	87	72.700	Scleropages_formosus
ENSLBEG00000003543	crnkl1	93	75.289	ENSSMAG00000007933	crnkl1	87	75.852	Scophthalmus_maximus
ENSLBEG00000003543	crnkl1	93	75.000	ENSSDUG00000012625	crnkl1	88	74.398	Seriola_dumerili
ENSLBEG00000003543	crnkl1	93	77.727	ENSSLDG00000021413	crnkl1	88	77.727	Seriola_lalandi_dorsalis
ENSLBEG00000003543	crnkl1	92	70.821	ENSSARG00000006443	CRNKL1	80	71.045	Sorex_araneus
ENSLBEG00000003543	crnkl1	92	70.365	ENSSPUG00000005254	CRNKL1	97	70.431	Sphenodon_punctatus
ENSLBEG00000003543	crnkl1	93	77.023	ENSSPAG00000016150	crnkl1	89	76.361	Stegastes_partitus
ENSLBEG00000003543	crnkl1	93	76.780	ENSSSCG00000038587	CRNKL1	99	76.780	Sus_scrofa
ENSLBEG00000003543	crnkl1	92	70.845	ENSTGUG00000007645	CRNKL1	96	61.905	Taeniopygia_guttata
ENSLBEG00000003543	crnkl1	90	79.601	ENSTRUG00000015417	crnkl1	89	75.115	Takifugu_rubripes
ENSLBEG00000003543	crnkl1	90	74.776	ENSTNIG00000010710	crnkl1	97	73.708	Tetraodon_nigroviridis
ENSLBEG00000003543	crnkl1	83	69.440	ENSTBEG00000001304	CRNKL1	82	68.396	Tupaia_belangeri
ENSLBEG00000003543	crnkl1	83	67.200	ENSTTRG00000000484	CRNKL1	81	66.352	Tursiops_truncatus
ENSLBEG00000003543	crnkl1	92	71.345	ENSUAMG00000018586	CRNKL1	97	71.025	Ursus_americanus
ENSLBEG00000003543	crnkl1	92	76.499	ENSUMAG00000024957	CRNKL1	97	77.796	Ursus_maritimus
ENSLBEG00000003543	crnkl1	91	71.134	ENSVVUG00000012559	CRNKL1	80	71.280	Vulpes_vulpes
ENSLBEG00000003543	crnkl1	93	72.872	ENSXETG00000009698	crnkl1	97	72.444	Xenopus_tropicalis
ENSLBEG00000003543	crnkl1	89	75.259	ENSXCOG00000000824	crnkl1	89	75.519	Xiphophorus_couchianus
ENSLBEG00000003543	crnkl1	89	74.777	ENSXMAG00000006896	crnkl1	89	75.037	Xiphophorus_maculatus