EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000003745 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 3275 bases
Position: chrFKLU01007519.1:4586-7860
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000004864	RVT_1	PF00078.27	3.8e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000005133	-	2445	-	ENSLBEP00000004864	814 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000003745's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000003745's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000003745	-	82	84.354	ENSLBEG00000006732	-	85	84.354
ENSLBEG00000003745	-	83	84.354	ENSLBEG00000004576	-	85	84.354

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000003745	-	91	42.787	ENSACIG00000013116	-	80	42.787	Amphilophus_citrinellus
ENSLBEG00000003745	-	91	38.868	ENSACIG00000010787	-	74	38.868	Amphilophus_citrinellus
ENSLBEG00000003745	-	92	42.735	ENSACIG00000007038	-	71	42.735	Amphilophus_citrinellus
ENSLBEG00000003745	-	90	39.601	ENSACIG00000012161	-	71	39.601	Amphilophus_citrinellus
ENSLBEG00000003745	-	92	42.805	ENSACIG00000009025	-	92	42.805	Amphilophus_citrinellus
ENSLBEG00000003745	-	92	39.015	ENSAMXG00000042811	-	61	40.941	Astyanax_mexicanus
ENSLBEG00000003745	-	93	36.428	ENSCPBG00000003842	-	61	36.823	Chrysemys_picta_bellii
ENSLBEG00000003745	-	92	38.690	ENSCVAG00000004138	-	77	38.673	Cyprinodon_variegatus
ENSLBEG00000003745	-	85	38.745	ENSELUG00000004597	-	73	38.121	Esox_lucius
ENSLBEG00000003745	-	79	35.404	ENSELUG00000004618	-	57	35.474	Esox_lucius
ENSLBEG00000003745	-	91	38.471	ENSFHEG00000002853	-	75	38.718	Fundulus_heteroclitus
ENSLBEG00000003745	-	86	41.460	ENSFHEG00000022106	-	67	41.460	Fundulus_heteroclitus
ENSLBEG00000003745	-	84	40.341	ENSFHEG00000002865	-	61	40.341	Fundulus_heteroclitus
ENSLBEG00000003745	-	92	37.713	ENSFHEG00000007211	-	75	37.956	Fundulus_heteroclitus
ENSLBEG00000003745	-	58	39.308	ENSGMOG00000005227	-	83	39.308	Gadus_morhua
ENSLBEG00000003745	-	60	35.397	ENSGACG00000000426	-	99	35.397	Gasterosteus_aculeatus
ENSLBEG00000003745	-	59	38.431	ENSGACG00000015045	-	99	38.431	Gasterosteus_aculeatus
ENSLBEG00000003745	-	80	38.095	ENSHCOG00000007436	-	64	39.474	Hippocampus_comes
ENSLBEG00000003745	-	85	36.616	ENSHCOG00000007389	-	67	36.616	Hippocampus_comes
ENSLBEG00000003745	-	91	36.510	ENSHCOG00000000471	-	67	36.510	Hippocampus_comes
ENSLBEG00000003745	-	91	35.496	ENSHCOG00000007397	-	72	35.496	Hippocampus_comes
ENSLBEG00000003745	-	69	32.373	ENSLACG00000009240	-	99	32.373	Latimeria_chalumnae
ENSLBEG00000003745	-	78	34.251	ENSLACG00000006357	-	81	34.251	Latimeria_chalumnae
ENSLBEG00000003745	-	63	37.546	ENSLOCG00000002743	-	100	37.546	Lepisosteus_oculatus
ENSLBEG00000003745	-	93	34.083	ENSLOCG00000017064	-	74	34.214	Lepisosteus_oculatus
ENSLBEG00000003745	-	91	33.745	ENSLOCG00000011928	-	73	33.745	Lepisosteus_oculatus
ENSLBEG00000003745	-	92	42.421	ENSMAMG00000019985	-	69	42.665	Mastacembelus_armatus
ENSLBEG00000003745	-	91	42.840	ENSONIG00000020875	-	70	42.840	Oreochromis_niloticus
ENSLBEG00000003745	-	91	37.672	ENSOMEG00000015368	-	75	37.672	Oryzias_melastigma
ENSLBEG00000003745	-	86	40.604	ENSPMGG00000017392	-	77	40.604	Periophthalmus_magnuspinnatus
ENSLBEG00000003745	-	73	40.224	ENSPMGG00000001593	-	63	40.289	Periophthalmus_magnuspinnatus
ENSLBEG00000003745	-	91	37.531	ENSPLAG00000011817	-	78	38.314	Poecilia_latipinna
ENSLBEG00000003745	-	89	39.015	ENSPLAG00000011810	-	74	39.015	Poecilia_latipinna
ENSLBEG00000003745	-	93	38.171	ENSPLAG00000023379	-	96	38.272	Poecilia_latipinna
ENSLBEG00000003745	-	91	38.758	ENSPLAG00000022994	-	75	38.758	Poecilia_latipinna
ENSLBEG00000003745	-	91	35.265	ENSPMEG00000008574	-	74	35.388	Poecilia_mexicana
ENSLBEG00000003745	-	91	39.006	ENSPMEG00000003431	-	76	39.421	Poecilia_mexicana
ENSLBEG00000003745	-	92	38.200	ENSPREG00000005756	-	74	38.200	Poecilia_reticulata
ENSLBEG00000003745	-	91	39.506	ENSPREG00000012484	-	71	39.753	Poecilia_reticulata
ENSLBEG00000003745	-	90	37.841	ENSPREG00000005456	-	69	37.841	Poecilia_reticulata
ENSLBEG00000003745	-	89	36.453	ENSPNAG00000021754	-	67	36.453	Pygocentrus_nattereri
ENSLBEG00000003745	-	85	38.336	ENSPNAG00000016635	-	61	38.336	Pygocentrus_nattereri
ENSLBEG00000003745	-	91	31.830	ENSPNAG00000014625	-	61	33.240	Pygocentrus_nattereri
ENSLBEG00000003745	-	91	36.342	ENSPNAG00000007038	-	69	36.582	Pygocentrus_nattereri
ENSLBEG00000003745	-	66	38.261	ENSPNAG00000017596	-	59	38.261	Pygocentrus_nattereri
ENSLBEG00000003745	-	86	38.896	ENSPNAG00000003539	-	65	37.361	Pygocentrus_nattereri
ENSLBEG00000003745	-	88	43.258	ENSXCOG00000013093	-	64	43.258	Xiphophorus_couchianus
ENSLBEG00000003745	-	91	39.401	ENSXCOG00000008881	-	90	39.401	Xiphophorus_couchianus
ENSLBEG00000003745	-	91	36.908	ENSXMAG00000028672	-	73	36.908	Xiphophorus_maculatus