EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000003798 (Gene tree)
Gene ID: 109991758
Gene Symbol: si:ch1073-296d18.1
Alias: -
Full Name: poly
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 9366 bases
Position: chrFKLU01000213.1:251626-260991
Accession: 109991758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000004969	PARP	PF00644.20	4.1e-30	1	1
ENSLBEP00000004951	PARP	PF00644.20	6.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000005238	-	1650	-	ENSLBEP00000004969	549 (aa)	-	-
ENSLBET00000005220	-	3838	XM_020644114	ENSLBEP00000004951	751 (aa)	XP_020499770	UPI0009B3747B

Gene Model

Click here to download ENSLBEG00000003798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000003798's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000003798	si:ch1073-296d18.1	52	83.590	ENSLBEG00000010052	-	100	83.590

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000003798	si:ch1073-296d18.1	90	33.042	ENSG00000178685	PARP10	55	33.275	Homo_sapiens
ENSLBEG00000003798	si:ch1073-296d18.1	87	66.208	ENSAPOG00000016910	si:ch1073-296d18.1	58	66.208	Acanthochromis_polyacanthus
ENSLBEG00000003798	si:ch1073-296d18.1	97	70.295	ENSAOCG00000007023	-	78	84.071	Amphiprion_ocellaris
ENSLBEG00000003798	si:ch1073-296d18.1	74	93.617	ENSAPEG00000005731	si:ch1073-296d18.1	100	69.397	Amphiprion_percula
ENSLBEG00000003798	si:ch1073-296d18.1	80	80.412	ENSATEG00000011078	si:ch1073-296d18.1	58	65.303	Anabas_testudineus
ENSLBEG00000003798	si:ch1073-296d18.1	90	32.137	ENSANAG00000037218	PARP10	52	51.064	Aotus_nancymaae
ENSLBEG00000003798	si:ch1073-296d18.1	97	68.411	ENSACLG00000012196	-	84	80.444	Astatotilapia_calliptera
ENSLBEG00000003798	si:ch1073-296d18.1	94	74.332	ENSAMXG00000039891	si:ch1073-296d18.1	51	74.332	Astyanax_mexicanus
ENSLBEG00000003798	si:ch1073-296d18.1	58	47.895	ENSBTAG00000009677	PARP10	56	47.872	Bos_taurus
ENSLBEG00000003798	si:ch1073-296d18.1	54	50.510	ENSCJAG00000034531	PARP10	56	33.160	Callithrix_jacchus
ENSLBEG00000003798	si:ch1073-296d18.1	77	49.474	ENSCHIG00000008072	PARP10	57	49.468	Capra_hircus
ENSLBEG00000003798	si:ch1073-296d18.1	57	51.053	ENSTSYG00000005439	PARP10	53	49.746	Carlito_syrichta
ENSLBEG00000003798	si:ch1073-296d18.1	91	32.509	ENSCPOG00000014235	PARP10	59	32.509	Cavia_porcellus
ENSLBEG00000003798	si:ch1073-296d18.1	90	30.973	ENSCCAG00000024610	PARP10	50	52.973	Cebus_capucinus
ENSLBEG00000003798	si:ch1073-296d18.1	89	33.916	ENSCATG00000025822	PARP10	55	34.091	Cercocebus_atys
ENSLBEG00000003798	si:ch1073-296d18.1	91	33.563	ENSCLAG00000013744	PARP10	59	33.972	Chinchilla_lanigera
ENSLBEG00000003798	si:ch1073-296d18.1	90	33.101	ENSCSAG00000008843	PARP10	55	33.275	Chlorocebus_sabaeus
ENSLBEG00000003798	si:ch1073-296d18.1	94	59.140	ENSCPBG00000004075	PARP10	60	59.140	Chrysemys_picta_bellii
ENSLBEG00000003798	si:ch1073-296d18.1	76	54.054	ENSCANG00000043564	PARP10	50	54.054	Colobus_angolensis_palliatus
ENSLBEG00000003798	si:ch1073-296d18.1	90	33.214	ENSCGRG00001012953	Parp10	58	33.810	Cricetulus_griseus_chok1gshd
ENSLBEG00000003798	si:ch1073-296d18.1	90	33.214	ENSCGRG00000003088	Parp10	58	33.810	Cricetulus_griseus_crigri
ENSLBEG00000003798	si:ch1073-296d18.1	84	88.557	ENSCVAG00000014098	-	87	88.557	Cyprinodon_variegatus
ENSLBEG00000003798	si:ch1073-296d18.1	97	73.118	ENSDARG00000087145	si:ch1073-296d18.1	99	49.103	Danio_rerio
ENSLBEG00000003798	si:ch1073-296d18.1	73	47.872	ENSDNOG00000046110	PARP10	50	47.849	Dasypus_novemcinctus
ENSLBEG00000003798	si:ch1073-296d18.1	66	47.619	ENSEBUG00000008834	-	68	48.544	Eptatretus_burgeri
ENSLBEG00000003798	si:ch1073-296d18.1	79	52.973	ENSEASG00005009729	PARP10	59	43.701	Equus_asinus_asinus
ENSLBEG00000003798	si:ch1073-296d18.1	76	49.727	ENSEEUG00000005507	PARP10	55	49.727	Erinaceus_europaeus
ENSLBEG00000003798	si:ch1073-296d18.1	96	79.255	ENSELUG00000001455	si:ch1073-296d18.1	54	81.013	Esox_lucius
ENSLBEG00000003798	si:ch1073-296d18.1	55	51.596	ENSFDAG00000015949	PARP10	58	30.880	Fukomys_damarensis
ENSLBEG00000003798	si:ch1073-296d18.1	97	56.309	ENSFHEG00000016698	-	76	65.868	Fundulus_heteroclitus
ENSLBEG00000003798	si:ch1073-296d18.1	81	69.444	ENSGMOG00000000853	si:ch1073-296d18.1	58	69.444	Gadus_morhua
ENSLBEG00000003798	si:ch1073-296d18.1	57	87.766	ENSGAFG00000018899	-	95	72.052	Gambusia_affinis
ENSLBEG00000003798	si:ch1073-296d18.1	97	88.830	ENSGACG00000008798	si:ch1073-296d18.1	62	81.481	Gasterosteus_aculeatus
ENSLBEG00000003798	si:ch1073-296d18.1	90	33.099	ENSGGOG00000001802	PARP10	50	52.660	Gorilla_gorilla
ENSLBEG00000003798	si:ch1073-296d18.1	67	93.085	ENSHBUG00000018913	-	100	73.204	Haplochromis_burtoni
ENSLBEG00000003798	si:ch1073-296d18.1	72	52.660	ENSHGLG00000010423	PARP10	53	32.570	Heterocephalus_glaber_female
ENSLBEG00000003798	si:ch1073-296d18.1	99	46.791	ENSIPUG00000011187	parp10	60	47.130	Ictalurus_punctatus
ENSLBEG00000003798	si:ch1073-296d18.1	76	51.913	ENSJJAG00000017801	Parp10	55	51.913	Jaculus_jaculus
ENSLBEG00000003798	si:ch1073-296d18.1	97	89.362	ENSKMAG00000002066	si:ch1073-296d18.1	61	66.711	Kryptolebias_marmoratus
ENSLBEG00000003798	si:ch1073-296d18.1	81	48.969	ENSLACG00000008645	PARP10	59	48.969	Latimeria_chalumnae
ENSLBEG00000003798	si:ch1073-296d18.1	95	76.757	ENSLOCG00000008505	si:ch1073-296d18.1	60	69.124	Lepisosteus_oculatus
ENSLBEG00000003798	si:ch1073-296d18.1	90	31.959	ENSLAFG00000004191	PARP10	58	32.513	Loxodonta_africana
ENSLBEG00000003798	si:ch1073-296d18.1	76	54.098	ENSMFAG00000044942	PARP10	50	54.098	Macaca_fascicularis
ENSLBEG00000003798	si:ch1073-296d18.1	89	33.451	ENSMMUG00000000449	PARP10	54	33.979	Macaca_mulatta
ENSLBEG00000003798	si:ch1073-296d18.1	89	33.451	ENSMNEG00000034827	PARP10	55	33.979	Macaca_nemestrina
ENSLBEG00000003798	si:ch1073-296d18.1	79	32.233	ENSMLEG00000024662	PARP10	53	32.427	Mandrillus_leucophaeus
ENSLBEG00000003798	si:ch1073-296d18.1	97	93.617	ENSMAMG00000003770	si:ch1073-296d18.1	59	93.617	Mastacembelus_armatus
ENSLBEG00000003798	si:ch1073-296d18.1	67	93.085	ENSMZEG00005001245	-	100	73.204	Maylandia_zebra
ENSLBEG00000003798	si:ch1073-296d18.1	74	52.632	ENSMICG00000016227	PARP10	56	33.097	Microcebus_murinus
ENSLBEG00000003798	si:ch1073-296d18.1	90	33.333	ENSMOCG00000000179	Parp10	50	49.500	Microtus_ochrogaster
ENSLBEG00000003798	si:ch1073-296d18.1	90	30.144	ENSMODG00000010393	-	58	30.144	Monodelphis_domestica
ENSLBEG00000003798	si:ch1073-296d18.1	96	30.806	MGP_CAROLIEiJ_G0019914	Parp10	95	58.095	Mus_caroli
ENSLBEG00000003798	si:ch1073-296d18.1	89	33.865	ENSMUSG00000063268	Parp10	95	58.095	Mus_musculus
ENSLBEG00000003798	si:ch1073-296d18.1	73	51.596	MGP_PahariEiJ_G0019924	Parp10	95	57.143	Mus_pahari
ENSLBEG00000003798	si:ch1073-296d18.1	89	32.270	MGP_SPRETEiJ_G0020817	Parp10	95	58.095	Mus_spretus
ENSLBEG00000003798	si:ch1073-296d18.1	55	53.191	ENSMLUG00000002730	PARP10	65	53.226	Myotis_lucifugus
ENSLBEG00000003798	si:ch1073-296d18.1	54	52.632	ENSNGAG00000023968	Parp10	58	33.692	Nannospalax_galili
ENSLBEG00000003798	si:ch1073-296d18.1	97	93.085	ENSNBRG00000000940	si:ch1073-296d18.1	59	91.457	Neolamprologus_brichardi
ENSLBEG00000003798	si:ch1073-296d18.1	90	31.944	ENSNLEG00000002423	PARP10	54	32.812	Nomascus_leucogenys
ENSLBEG00000003798	si:ch1073-296d18.1	50	50.968	ENSMEUG00000001906	-	50	50.968	Notamacropus_eugenii
ENSLBEG00000003798	si:ch1073-296d18.1	84	32.325	ENSOPRG00000015616	-	52	32.150	Ochotona_princeps
ENSLBEG00000003798	si:ch1073-296d18.1	89	31.874	ENSODEG00000014276	PARP10	58	31.874	Octodon_degus
ENSLBEG00000003798	si:ch1073-296d18.1	97	93.617	ENSONIG00000007669	si:ch1073-296d18.1	57	93.617	Oreochromis_niloticus
ENSLBEG00000003798	si:ch1073-296d18.1	58	52.660	ENSOANG00000013123	-	64	32.730	Ornithorhynchus_anatinus
ENSLBEG00000003798	si:ch1073-296d18.1	71	51.208	ENSORLG00000013501	-	94	73.568	Oryzias_latipes
ENSLBEG00000003798	si:ch1073-296d18.1	97	86.702	ENSORLG00015010006	si:ch1073-296d18.1	53	86.702	Oryzias_latipes_hsok
ENSLBEG00000003798	si:ch1073-296d18.1	79	84.444	ENSOMEG00000011731	si:ch1073-296d18.1	57	58.040	Oryzias_melastigma
ENSLBEG00000003798	si:ch1073-296d18.1	90	33.795	ENSOGAG00000033747	PARP10	56	33.795	Otolemur_garnettii
ENSLBEG00000003798	si:ch1073-296d18.1	63	48.947	ENSOARG00000015581	PARP10	56	48.936	Ovis_aries
ENSLBEG00000003798	si:ch1073-296d18.1	54	51.531	ENSPPAG00000041157	PARP10	51	52.128	Pan_paniscus
ENSLBEG00000003798	si:ch1073-296d18.1	54	51.531	ENSPTRG00000043606	PARP10	51	52.128	Pan_troglodytes
ENSLBEG00000003798	si:ch1073-296d18.1	89	34.091	ENSPANG00000023348	PARP10	56	34.083	Papio_anubis
ENSLBEG00000003798	si:ch1073-296d18.1	97	87.234	ENSPFOG00000013067	si:ch1073-296d18.1	61	86.634	Poecilia_formosa
ENSLBEG00000003798	si:ch1073-296d18.1	82	87.000	ENSPLAG00000022710	-	86	87.000	Poecilia_latipinna
ENSLBEG00000003798	si:ch1073-296d18.1	82	87.000	ENSPMEG00000019504	-	85	87.000	Poecilia_mexicana
ENSLBEG00000003798	si:ch1073-296d18.1	94	31.987	ENSPPYG00000018955	PARP10	61	33.221	Pongo_abelii
ENSLBEG00000003798	si:ch1073-296d18.1	74	49.246	ENSPCAG00000001115	PARP10	61	51.064	Procavia_capensis
ENSLBEG00000003798	si:ch1073-296d18.1	91	33.276	ENSPCOG00000028616	PARP10	58	33.619	Propithecus_coquereli
ENSLBEG00000003798	si:ch1073-296d18.1	55	51.064	ENSPVAG00000006369	PARP10	54	51.351	Pteropus_vampyrus
ENSLBEG00000003798	si:ch1073-296d18.1	97	65.794	ENSPNYG00000005086	-	84	74.222	Pundamilia_nyererei
ENSLBEG00000003798	si:ch1073-296d18.1	97	72.727	ENSPNAG00000024484	si:ch1073-296d18.1	60	50.132	Pygocentrus_nattereri
ENSLBEG00000003798	si:ch1073-296d18.1	89	34.177	ENSRNOG00000004361	Parp10	57	34.532	Rattus_norvegicus
ENSLBEG00000003798	si:ch1073-296d18.1	76	54.595	ENSRBIG00000040506	PARP10	55	34.146	Rhinopithecus_bieti
ENSLBEG00000003798	si:ch1073-296d18.1	76	54.054	ENSRROG00000039086	PARP10	54	33.972	Rhinopithecus_roxellana
ENSLBEG00000003798	si:ch1073-296d18.1	71	50.000	ENSSBOG00000008301	PARP10	58	34.495	Saimiri_boliviensis_boliviensis
ENSLBEG00000003798	si:ch1073-296d18.1	89	31.041	ENSSHAG00000002568	-	59	31.111	Sarcophilus_harrisii
ENSLBEG00000003798	si:ch1073-296d18.1	74	86.559	ENSSMAG00000020545	-	99	66.391	Scophthalmus_maximus
ENSLBEG00000003798	si:ch1073-296d18.1	81	94.527	ENSSLDG00000003545	-	87	94.527	Seriola_lalandi_dorsalis
ENSLBEG00000003798	si:ch1073-296d18.1	97	68.450	ENSSPAG00000005439	-	83	83.186	Stegastes_partitus
ENSLBEG00000003798	si:ch1073-296d18.1	94	46.758	ENSTNIG00000014023	si:ch1073-296d18.1	61	46.758	Tetraodon_nigroviridis
ENSLBEG00000003798	si:ch1073-296d18.1	76	49.198	ENSTTRG00000006314	PARP10	54	49.198	Tursiops_truncatus
ENSLBEG00000003798	si:ch1073-296d18.1	82	87.000	ENSXCOG00000003615	-	86	87.000	Xiphophorus_couchianus
ENSLBEG00000003798	si:ch1073-296d18.1	82	87.000	ENSXMAG00000025112	-	85	87.000	Xiphophorus_maculatus