EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000003823 (Gene tree)
Gene ID: 109985992
Gene Symbol: si:dkey-10o6.2 (1 of many)
Alias: -
Full Name: UPF0676 protein C1494.01-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 5769 bases
Position: chrFKLU01000089.1:830960-836728
Accession: 109985992
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000004937	2OG-FeII_Oxy	PF03171.20	4.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000005206	-	1020	XM_020636470	ENSLBEP00000004937	339 (aa)	XP_020492126	UPI0009B4B7B3

Gene Model

Click here to download ENSLBEG00000003823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000003823's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000003823	si:dkey-10o6.2	90	71.661	ENSLBEG00000003839	si:dkey-10o6.2	99	71.661

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000003823	si:dkey-10o6.2	74	71.373	ENSAPOG00000011678	si:dkey-10o6.2	89	71.373	Acanthochromis_polyacanthus
ENSLBEG00000003823	si:dkey-10o6.2	91	66.559	ENSACIG00000011675	-	100	66.559	Amphilophus_citrinellus
ENSLBEG00000003823	si:dkey-10o6.2	88	68.543	ENSACIG00000024115	si:dkey-10o6.2	96	68.543	Amphilophus_citrinellus
ENSLBEG00000003823	si:dkey-10o6.2	90	68.182	ENSAOCG00000013068	si:dkey-10o6.2	99	68.182	Amphiprion_ocellaris
ENSLBEG00000003823	si:dkey-10o6.2	90	68.182	ENSAPEG00000011246	si:dkey-10o6.2	99	68.182	Amphiprion_percula
ENSLBEG00000003823	si:dkey-10o6.2	91	65.595	ENSATEG00000000030	si:dkey-10o6.2	100	65.595	Anabas_testudineus
ENSLBEG00000003823	si:dkey-10o6.2	91	66.881	ENSATEG00000021945	si:dkey-10o6.2	100	66.881	Anabas_testudineus
ENSLBEG00000003823	si:dkey-10o6.2	91	65.273	ENSATEG00000021952	si:dkey-10o6.2	100	65.273	Anabas_testudineus
ENSLBEG00000003823	si:dkey-10o6.2	91	66.559	ENSACLG00000023011	si:dkey-10o6.2	100	66.559	Astatotilapia_calliptera
ENSLBEG00000003823	si:dkey-10o6.2	90	59.740	ENSAMXG00000021555	si:dkey-10o6.2	99	59.740	Astyanax_mexicanus
ENSLBEG00000003823	si:dkey-10o6.2	90	37.273	ENSCING00000007255	-	99	37.273	Ciona_intestinalis
ENSLBEG00000003823	si:dkey-10o6.2	88	33.861	ENSCING00000022311	-	97	33.861	Ciona_intestinalis
ENSLBEG00000003823	si:dkey-10o6.2	82	34.266	ENSCING00000012500	-	87	34.266	Ciona_intestinalis
ENSLBEG00000003823	si:dkey-10o6.2	68	42.739	ENSCING00000011926	-	99	42.739	Ciona_intestinalis
ENSLBEG00000003823	si:dkey-10o6.2	91	36.095	ENSCING00000016920	-	96	36.095	Ciona_intestinalis
ENSLBEG00000003823	si:dkey-10o6.2	82	33.449	ENSCSAVG00000000201	-	87	33.449	Ciona_savignyi
ENSLBEG00000003823	si:dkey-10o6.2	89	36.615	ENSCSAVG00000004616	-	99	36.615	Ciona_savignyi
ENSLBEG00000003823	si:dkey-10o6.2	51	40.314	ENSCSAVG00000004871	-	98	40.314	Ciona_savignyi
ENSLBEG00000003823	si:dkey-10o6.2	70	33.469	ENSCSAVG00000001337	-	99	33.469	Ciona_savignyi
ENSLBEG00000003823	si:dkey-10o6.2	91	58.576	ENSCSEG00000000918	si:dkey-10o6.2	99	58.576	Cynoglossus_semilaevis
ENSLBEG00000003823	si:dkey-10o6.2	91	59.486	ENSCSEG00000000927	si:dkey-10o6.2	100	59.486	Cynoglossus_semilaevis
ENSLBEG00000003823	si:dkey-10o6.2	91	64.630	ENSCVAG00000015074	si:dkey-10o6.2	100	64.630	Cyprinodon_variegatus
ENSLBEG00000003823	si:dkey-10o6.2	97	60.831	ENSDARG00000074628	si:dkey-10o6.2	96	60.831	Danio_rerio
ENSLBEG00000003823	si:dkey-10o6.2	84	33.673	FBgn0053093	CG33093	87	33.673	Drosophila_melanogaster
ENSLBEG00000003823	si:dkey-10o6.2	90	33.645	FBgn0053099	CG33099	94	33.645	Drosophila_melanogaster
ENSLBEG00000003823	si:dkey-10o6.2	90	66.124	ENSELUG00000003488	si:dkey-10o6.2	99	66.124	Esox_lucius
ENSLBEG00000003823	si:dkey-10o6.2	91	65.273	ENSFHEG00000019035	si:dkey-10o6.2	100	65.273	Fundulus_heteroclitus
ENSLBEG00000003823	si:dkey-10o6.2	88	62.667	ENSGMOG00000018989	si:dkey-10o6.2	100	62.667	Gadus_morhua
ENSLBEG00000003823	si:dkey-10o6.2	91	64.952	ENSGAFG00000006137	si:dkey-10o6.2	100	64.952	Gambusia_affinis
ENSLBEG00000003823	si:dkey-10o6.2	90	61.371	ENSGACG00000006806	si:dkey-10o6.2	99	61.371	Gasterosteus_aculeatus
ENSLBEG00000003823	si:dkey-10o6.2	91	66.238	ENSHBUG00000008853	si:dkey-10o6.2	100	66.238	Haplochromis_burtoni
ENSLBEG00000003823	si:dkey-10o6.2	91	65.705	ENSHCOG00000017626	si:dkey-10o6.2	100	65.705	Hippocampus_comes
ENSLBEG00000003823	si:dkey-10o6.2	91	59.615	ENSHCOG00000017671	-	100	59.615	Hippocampus_comes
ENSLBEG00000003823	si:dkey-10o6.2	90	62.987	ENSIPUG00000018911	-	99	62.987	Ictalurus_punctatus
ENSLBEG00000003823	si:dkey-10o6.2	98	59.347	ENSIPUG00000018879	si:dkey-10o6.2	95	59.347	Ictalurus_punctatus
ENSLBEG00000003823	si:dkey-10o6.2	90	59.355	ENSKMAG00000006197	si:dkey-10o6.2	99	59.355	Kryptolebias_marmoratus
ENSLBEG00000003823	si:dkey-10o6.2	91	64.103	ENSMAMG00000023025	-	100	64.103	Mastacembelus_armatus
ENSLBEG00000003823	si:dkey-10o6.2	91	65.064	ENSMAMG00000023026	-	100	65.064	Mastacembelus_armatus
ENSLBEG00000003823	si:dkey-10o6.2	91	66.026	ENSMAMG00000023020	si:dkey-10o6.2	100	66.026	Mastacembelus_armatus
ENSLBEG00000003823	si:dkey-10o6.2	91	66.026	ENSMAMG00000023022	si:dkey-10o6.2	100	66.026	Mastacembelus_armatus
ENSLBEG00000003823	si:dkey-10o6.2	91	66.881	ENSMZEG00005012018	si:dkey-10o6.2	100	66.881	Maylandia_zebra
ENSLBEG00000003823	si:dkey-10o6.2	89	62.701	ENSMMOG00000020383	si:dkey-10o6.2	97	62.701	Mola_mola
ENSLBEG00000003823	si:dkey-10o6.2	91	64.537	ENSMALG00000011300	si:dkey-10o6.2	100	64.537	Monopterus_albus
ENSLBEG00000003823	si:dkey-10o6.2	91	62.058	ENSNBRG00000015840	si:dkey-10o6.2	100	62.058	Neolamprologus_brichardi
ENSLBEG00000003823	si:dkey-10o6.2	91	66.559	ENSONIG00000015572	si:dkey-10o6.2	100	66.559	Oreochromis_niloticus
ENSLBEG00000003823	si:dkey-10o6.2	91	61.688	ENSORLG00000001314	si:dkey-10o6.2	100	61.688	Oryzias_latipes
ENSLBEG00000003823	si:dkey-10o6.2	91	62.013	ENSORLG00020002660	si:dkey-10o6.2	100	62.013	Oryzias_latipes_hni
ENSLBEG00000003823	si:dkey-10o6.2	91	62.460	ENSOMEG00000003617	si:dkey-10o6.2	97	62.460	Oryzias_melastigma
ENSLBEG00000003823	si:dkey-10o6.2	90	60.912	ENSPKIG00000024109	-	98	62.109	Paramormyrops_kingsleyae
ENSLBEG00000003823	si:dkey-10o6.2	90	58.576	ENSPKIG00000004183	si:dkey-10o6.2	86	58.576	Paramormyrops_kingsleyae
ENSLBEG00000003823	si:dkey-10o6.2	90	59.547	ENSPKIG00000004206	si:dkey-10o6.2	80	59.547	Paramormyrops_kingsleyae
ENSLBEG00000003823	si:dkey-10o6.2	90	56.774	ENSPMGG00000021603	si:dkey-10o6.2	99	56.774	Periophthalmus_magnuspinnatus
ENSLBEG00000003823	si:dkey-10o6.2	89	66.013	ENSPFOG00000017244	si:dkey-10o6.2	97	66.013	Poecilia_formosa
ENSLBEG00000003823	si:dkey-10o6.2	90	65.909	ENSPLAG00000008037	si:dkey-10o6.2	99	65.909	Poecilia_latipinna
ENSLBEG00000003823	si:dkey-10o6.2	63	70.968	ENSPMEG00000020748	si:dkey-10o6.2	96	71.226	Poecilia_mexicana
ENSLBEG00000003823	si:dkey-10o6.2	90	63.399	ENSPREG00000005108	si:dkey-10o6.2	99	63.399	Poecilia_reticulata
ENSLBEG00000003823	si:dkey-10o6.2	91	66.559	ENSPNYG00000010698	si:dkey-10o6.2	100	66.559	Pundamilia_nyererei
ENSLBEG00000003823	si:dkey-10o6.2	92	60.252	ENSPNAG00000014123	si:dkey-10o6.2	98	60.252	Pygocentrus_nattereri
ENSLBEG00000003823	si:dkey-10o6.2	84	58.885	ENSPNAG00000014485	-	87	58.885	Pygocentrus_nattereri
ENSLBEG00000003823	si:dkey-10o6.2	86	60.269	ENSSFOG00015015345	si:dkey-10o6.2	96	60.269	Scleropages_formosus
ENSLBEG00000003823	si:dkey-10o6.2	91	65.472	ENSSMAG00000019016	si:dkey-10o6.2	100	65.472	Scophthalmus_maximus
ENSLBEG00000003823	si:dkey-10o6.2	91	69.453	ENSSDUG00000000943	si:dkey-10o6.2	100	69.453	Seriola_dumerili
ENSLBEG00000003823	si:dkey-10o6.2	91	69.132	ENSSLDG00000003462	si:dkey-10o6.2	100	69.132	Seriola_lalandi_dorsalis
ENSLBEG00000003823	si:dkey-10o6.2	90	66.883	ENSSPAG00000020962	si:dkey-10o6.2	99	66.883	Stegastes_partitus
ENSLBEG00000003823	si:dkey-10o6.2	90	60.518	ENSTRUG00000019532	si:dkey-10o6.2	99	60.518	Takifugu_rubripes
ENSLBEG00000003823	si:dkey-10o6.2	91	62.821	ENSXCOG00000000855	si:dkey-10o6.2	100	62.821	Xiphophorus_couchianus
ENSLBEG00000003823	si:dkey-10o6.2	91	63.344	ENSXMAG00000012432	si:dkey-10o6.2	100	63.344	Xiphophorus_maculatus