EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000003839 (Gene tree)
Gene ID: 109985967
Gene Symbol: si:dkey-10o6.2 (1 of many)
Alias: -
Full Name: UPF0676 protein C1494.01-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 6280 bases
Position: chrFKLU01000089.1:836807-843086
Accession: 109985967
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000004984	2OG-FeII_Oxy	PF03171.20	2.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000005253	-	927	XM_020636437	ENSLBEP00000004984	308 (aa)	XP_020492093	-

Gene Model

Click here to download ENSLBEG00000003839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000003839's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000003839	si:dkey-10o6.2	99	71.661	ENSLBEG00000003823	si:dkey-10o6.2	90	71.661

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000003839	si:dkey-10o6.2	94	70.990	ENSAPOG00000011678	si:dkey-10o6.2	99	70.990	Acanthochromis_polyacanthus
ENSLBEG00000003839	si:dkey-10o6.2	99	74.026	ENSACIG00000011675	-	99	74.026	Amphilophus_citrinellus
ENSLBEG00000003839	si:dkey-10o6.2	97	74.172	ENSACIG00000024115	si:dkey-10o6.2	96	74.172	Amphilophus_citrinellus
ENSLBEG00000003839	si:dkey-10o6.2	99	74.026	ENSAOCG00000013068	si:dkey-10o6.2	99	74.026	Amphiprion_ocellaris
ENSLBEG00000003839	si:dkey-10o6.2	99	74.351	ENSAPEG00000011246	si:dkey-10o6.2	99	74.351	Amphiprion_percula
ENSLBEG00000003839	si:dkey-10o6.2	99	71.429	ENSATEG00000021952	si:dkey-10o6.2	99	71.429	Anabas_testudineus
ENSLBEG00000003839	si:dkey-10o6.2	99	74.675	ENSATEG00000021945	si:dkey-10o6.2	99	74.675	Anabas_testudineus
ENSLBEG00000003839	si:dkey-10o6.2	99	72.727	ENSATEG00000000030	si:dkey-10o6.2	99	72.727	Anabas_testudineus
ENSLBEG00000003839	si:dkey-10o6.2	99	74.026	ENSACLG00000023011	si:dkey-10o6.2	99	74.026	Astatotilapia_calliptera
ENSLBEG00000003839	si:dkey-10o6.2	99	59.609	ENSAMXG00000021555	si:dkey-10o6.2	98	59.609	Astyanax_mexicanus
ENSLBEG00000003839	si:dkey-10o6.2	98	31.975	ENSCING00000012500	-	97	31.975	Ciona_intestinalis
ENSLBEG00000003839	si:dkey-10o6.2	76	39.419	ENSCING00000011926	-	99	39.419	Ciona_intestinalis
ENSLBEG00000003839	si:dkey-10o6.2	90	34.035	ENSCING00000022311	-	87	34.035	Ciona_intestinalis
ENSLBEG00000003839	si:dkey-10o6.2	89	35.354	ENSCING00000016920	-	85	35.354	Ciona_intestinalis
ENSLBEG00000003839	si:dkey-10o6.2	91	40.972	ENSCING00000007255	-	86	40.972	Ciona_intestinalis
ENSLBEG00000003839	si:dkey-10o6.2	78	35.510	ENSCSAVG00000001337	-	99	35.510	Ciona_savignyi
ENSLBEG00000003839	si:dkey-10o6.2	82	38.023	ENSCSAVG00000004616	-	80	38.023	Ciona_savignyi
ENSLBEG00000003839	si:dkey-10o6.2	99	31.988	ENSCSAVG00000000201	-	98	31.988	Ciona_savignyi
ENSLBEG00000003839	si:dkey-10o6.2	99	63.636	ENSCSEG00000000927	si:dkey-10o6.2	99	63.636	Cynoglossus_semilaevis
ENSLBEG00000003839	si:dkey-10o6.2	99	61.889	ENSCSEG00000000918	si:dkey-10o6.2	98	61.889	Cynoglossus_semilaevis
ENSLBEG00000003839	si:dkey-10o6.2	99	69.481	ENSCVAG00000015074	si:dkey-10o6.2	99	69.481	Cyprinodon_variegatus
ENSLBEG00000003839	si:dkey-10o6.2	99	62.662	ENSDARG00000074628	si:dkey-10o6.2	88	62.662	Danio_rerio
ENSLBEG00000003839	si:dkey-10o6.2	84	30.094	FBgn0038981	CG5346	78	30.094	Drosophila_melanogaster
ENSLBEG00000003839	si:dkey-10o6.2	84	38.577	FBgn0053093	CG33093	82	38.577	Drosophila_melanogaster
ENSLBEG00000003839	si:dkey-10o6.2	95	33.010	FBgn0053099	CG33099	92	33.010	Drosophila_melanogaster
ENSLBEG00000003839	si:dkey-10o6.2	99	69.156	ENSELUG00000003488	si:dkey-10o6.2	99	69.156	Esox_lucius
ENSLBEG00000003839	si:dkey-10o6.2	99	68.182	ENSFHEG00000019035	si:dkey-10o6.2	99	68.182	Fundulus_heteroclitus
ENSLBEG00000003839	si:dkey-10o6.2	98	66.007	ENSGMOG00000018989	si:dkey-10o6.2	100	66.007	Gadus_morhua
ENSLBEG00000003839	si:dkey-10o6.2	99	66.883	ENSGAFG00000006137	si:dkey-10o6.2	99	66.883	Gambusia_affinis
ENSLBEG00000003839	si:dkey-10o6.2	100	66.770	ENSGACG00000006806	si:dkey-10o6.2	99	66.770	Gasterosteus_aculeatus
ENSLBEG00000003839	si:dkey-10o6.2	99	74.351	ENSHBUG00000008853	si:dkey-10o6.2	99	74.351	Haplochromis_burtoni
ENSLBEG00000003839	si:dkey-10o6.2	99	65.049	ENSHCOG00000017671	-	99	64.725	Hippocampus_comes
ENSLBEG00000003839	si:dkey-10o6.2	99	69.579	ENSHCOG00000017626	si:dkey-10o6.2	99	69.579	Hippocampus_comes
ENSLBEG00000003839	si:dkey-10o6.2	99	61.111	ENSIPUG00000018911	-	98	61.111	Ictalurus_punctatus
ENSLBEG00000003839	si:dkey-10o6.2	99	61.111	ENSIPUG00000018879	si:dkey-10o6.2	91	60.784	Ictalurus_punctatus
ENSLBEG00000003839	si:dkey-10o6.2	99	65.260	ENSKMAG00000006197	si:dkey-10o6.2	98	65.260	Kryptolebias_marmoratus
ENSLBEG00000003839	si:dkey-10o6.2	99	71.845	ENSMAMG00000023026	-	99	71.845	Mastacembelus_armatus
ENSLBEG00000003839	si:dkey-10o6.2	99	71.521	ENSMAMG00000023025	-	99	71.521	Mastacembelus_armatus
ENSLBEG00000003839	si:dkey-10o6.2	99	71.521	ENSMAMG00000023022	si:dkey-10o6.2	99	71.521	Mastacembelus_armatus
ENSLBEG00000003839	si:dkey-10o6.2	99	72.492	ENSMAMG00000023020	si:dkey-10o6.2	99	72.492	Mastacembelus_armatus
ENSLBEG00000003839	si:dkey-10o6.2	99	74.351	ENSMZEG00005012018	si:dkey-10o6.2	99	74.351	Maylandia_zebra
ENSLBEG00000003839	si:dkey-10o6.2	99	66.026	ENSMMOG00000020383	si:dkey-10o6.2	97	66.026	Mola_mola
ENSLBEG00000003839	si:dkey-10o6.2	99	70.000	ENSMALG00000011300	si:dkey-10o6.2	99	70.000	Monopterus_albus
ENSLBEG00000003839	si:dkey-10o6.2	99	68.182	ENSNBRG00000015840	si:dkey-10o6.2	99	68.182	Neolamprologus_brichardi
ENSLBEG00000003839	si:dkey-10o6.2	99	75.405	ENSONIG00000015572	si:dkey-10o6.2	99	75.325	Oreochromis_niloticus
ENSLBEG00000003839	si:dkey-10o6.2	99	63.312	ENSORLG00000001314	si:dkey-10o6.2	99	63.312	Oryzias_latipes
ENSLBEG00000003839	si:dkey-10o6.2	99	63.636	ENSORLG00020002660	si:dkey-10o6.2	99	63.636	Oryzias_latipes_hni
ENSLBEG00000003839	si:dkey-10o6.2	99	64.935	ENSOMEG00000003617	si:dkey-10o6.2	96	64.935	Oryzias_melastigma
ENSLBEG00000003839	si:dkey-10o6.2	99	62.338	ENSPKIG00000024109	-	97	63.780	Paramormyrops_kingsleyae
ENSLBEG00000003839	si:dkey-10o6.2	99	60.968	ENSPKIG00000004206	si:dkey-10o6.2	80	60.968	Paramormyrops_kingsleyae
ENSLBEG00000003839	si:dkey-10o6.2	99	62.179	ENSPKIG00000004183	si:dkey-10o6.2	87	62.179	Paramormyrops_kingsleyae
ENSLBEG00000003839	si:dkey-10o6.2	99	57.235	ENSPMGG00000021603	si:dkey-10o6.2	98	56.592	Periophthalmus_magnuspinnatus
ENSLBEG00000003839	si:dkey-10o6.2	99	66.340	ENSPFOG00000017244	si:dkey-10o6.2	97	66.340	Poecilia_formosa
ENSLBEG00000003839	si:dkey-10o6.2	99	66.340	ENSPLAG00000008037	si:dkey-10o6.2	99	66.340	Poecilia_latipinna
ENSLBEG00000003839	si:dkey-10o6.2	69	67.593	ENSPMEG00000020748	si:dkey-10o6.2	96	67.593	Poecilia_mexicana
ENSLBEG00000003839	si:dkey-10o6.2	99	63.844	ENSPREG00000005108	si:dkey-10o6.2	99	63.844	Poecilia_reticulata
ENSLBEG00000003839	si:dkey-10o6.2	99	73.701	ENSPNYG00000010698	si:dkey-10o6.2	99	73.701	Pundamilia_nyererei
ENSLBEG00000003839	si:dkey-10o6.2	92	59.582	ENSPNAG00000014485	-	87	59.582	Pygocentrus_nattereri
ENSLBEG00000003839	si:dkey-10o6.2	99	62.460	ENSPNAG00000014123	si:dkey-10o6.2	97	62.460	Pygocentrus_nattereri
ENSLBEG00000003839	si:dkey-10o6.2	97	60.265	ENSSFOG00015015345	si:dkey-10o6.2	98	60.265	Scleropages_formosus
ENSLBEG00000003839	si:dkey-10o6.2	99	71.987	ENSSMAG00000019016	si:dkey-10o6.2	99	71.987	Scophthalmus_maximus
ENSLBEG00000003839	si:dkey-10o6.2	99	75.325	ENSSDUG00000000943	si:dkey-10o6.2	99	75.325	Seriola_dumerili
ENSLBEG00000003839	si:dkey-10o6.2	99	75.000	ENSSLDG00000003462	si:dkey-10o6.2	99	75.000	Seriola_lalandi_dorsalis
ENSLBEG00000003839	si:dkey-10o6.2	99	73.377	ENSSPAG00000020962	si:dkey-10o6.2	99	73.377	Stegastes_partitus
ENSLBEG00000003839	si:dkey-10o6.2	99	62.541	ENSTRUG00000019532	si:dkey-10o6.2	99	62.541	Takifugu_rubripes
ENSLBEG00000003839	si:dkey-10o6.2	99	64.725	ENSXCOG00000000855	si:dkey-10o6.2	99	64.725	Xiphophorus_couchianus
ENSLBEG00000003839	si:dkey-10o6.2	99	65.909	ENSXMAG00000012432	si:dkey-10o6.2	99	65.909	Xiphophorus_maculatus