EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLBEG00000004030 (Gene tree)
Gene ID
109994097
Gene Symbol
rbfox3b
Alias
rbfox3l|si:ch73-322f21.1
Full Name
RNA binding protein fox-1 homolog 3-like
Gene Type
protein_coding
Species
Labrus_bergylta
Status
putative
Strand
Plus strand
Length
97079 bases
Position
chrFKLU01000279.1:42880-139958
Accession
109994097
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLBEP00000005242Fox-1_CPF12414.88e-4311
ENSLBEP00000005216Fox-1_CPF12414.89.6e-4311
ENSLBEP00000005268Fox-1_CPF12414.82.4e-2711
ENSLBEP00000005268RRM_1PF00076.221.3e-1811
ENSLBEP00000005216RRM_1PF00076.221.8e-1811
ENSLBEP00000005242RRM_1PF00076.221.9e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLBET00000005540-906-ENSLBEP00000005268301 (aa)--
ENSLBET00000005487-1461XM_020647263ENSLBEP00000005216365 (aa)XP_020502919-
ENSLBET00000005513-1503XM_020647261ENSLBEP00000005242379 (aa)XP_020502917UPI0009B334B8
Gene Model
Click here to download ENSLBEG00000004030's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000004030's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLBEG00000004030rbfox3b9455.627ENSLBEG00000017089rbfox1l8959.475
ENSLBEG00000004030rbfox3b9964.742ENSLBEG00000014659rbfox19767.045
ENSLBEG00000004030rbfox3b10086.376ENSLBEG00000022508-10086.376
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLBEG00000004030rbfox3b9475.083ENSG00000167281RBFOX39989.231Homo_sapiens
ENSLBEG00000004030rbfox3b9178.623ENSAPOG00000015658-9269.169Acanthochromis_polyacanthus
ENSLBEG00000004030rbfox3b10099.472ENSAPOG00000021630rbfox3b10099.472Acanthochromis_polyacanthus
ENSLBEG00000004030rbfox3b9570.312ENSAMEG00000014170RBFOX39872.798Ailuropoda_melanoleuca
ENSLBEG00000004030rbfox3b9471.383ENSACIG00000003768-9070.859Amphilophus_citrinellus
ENSLBEG00000004030rbfox3b10099.336ENSACIG00000010817rbfox3b10099.336Amphilophus_citrinellus
ENSLBEG00000004030rbfox3b10080.109ENSAOCG00000010786-9880.811Amphiprion_ocellaris
ENSLBEG00000004030rbfox3b10099.452ENSAOCG00000012358rbfox3b10099.452Amphiprion_ocellaris
ENSLBEG00000004030rbfox3b10093.023ENSAPEG00000019081rbfox3b10089.674Amphiprion_percula
ENSLBEG00000004030rbfox3b9477.850ENSAPEG00000015891-9471.728Amphiprion_percula
ENSLBEG00000004030rbfox3b10086.957ENSATEG00000019945rbfox3b10088.986Anabas_testudineus
ENSLBEG00000004030rbfox3b9575.248ENSATEG00000023101-9779.560Anabas_testudineus
ENSLBEG00000004030rbfox3b9880.501ENSACAG00000016093RBFOX39981.285Anolis_carolinensis
ENSLBEG00000004030rbfox3b9474.667ENSANAG00000023457RBFOX310082.166Aotus_nancymaae
ENSLBEG00000004030rbfox3b10098.684ENSACLG00000020011rbfox3b10098.684Astatotilapia_calliptera
ENSLBEG00000004030rbfox3b10082.016ENSACLG00000025552-10082.834Astatotilapia_calliptera
ENSLBEG00000004030rbfox3b10083.333ENSAMXG00000037246rbfox3a10085.215Astyanax_mexicanus
ENSLBEG00000004030rbfox3b9787.006ENSAMXG00000042841rbfox3b10086.441Astyanax_mexicanus
ENSLBEG00000004030rbfox3b7980.335ENSBTAG00000006280RBFOX310063.435Bos_taurus
ENSLBEG00000004030rbfox3b9478.397ENSCJAG00000009563RBFOX39381.395Callithrix_jacchus
ENSLBEG00000004030rbfox3b7578.838ENSCAFG00000005547RBFOX39979.286Canis_familiaris
ENSLBEG00000004030rbfox3b9271.429ENSCAFG00020008126RBFOX310072.267Canis_lupus_dingo
ENSLBEG00000004030rbfox3b9561.143ENSCHIG00000009124RBFOX310072.267Capra_hircus
ENSLBEG00000004030rbfox3b8593.103ENSTSYG00000029617RBFOX310072.099Carlito_syrichta
ENSLBEG00000004030rbfox3b5175.159ENSCAPG00000010217RBFOX310076.608Cavia_aperea
ENSLBEG00000004030rbfox3b9564.972ENSCPOG00000021703RBFOX310071.693Cavia_porcellus
ENSLBEG00000004030rbfox3b9474.667ENSCCAG00000028450RBFOX310082.166Cebus_capucinus
ENSLBEG00000004030rbfox3b9478.746ENSCATG00000018349RBFOX310082.484Cercocebus_atys
ENSLBEG00000004030rbfox3b9565.341ENSCLAG00000006449RBFOX310072.074Chinchilla_lanigera
ENSLBEG00000004030rbfox3b9475.000ENSCSAG00000002355RBFOX310082.484Chlorocebus_sabaeus
ENSLBEG00000004030rbfox3b8984.320ENSCPBG00000010904RBFOX310083.387Chrysemys_picta_bellii
ENSLBEG00000004030rbfox3b9475.000ENSCANG00000043120RBFOX310082.484Colobus_angolensis_palliatus
ENSLBEG00000004030rbfox3b8586.207ENSCGRG00001019476Rbfox310072.149Cricetulus_griseus_chok1gshd
ENSLBEG00000004030rbfox3b8586.207ENSCGRG00000003268Rbfox310072.149Cricetulus_griseus_crigri
ENSLBEG00000004030rbfox3b9984.768ENSCSEG00000015567RBFOX39880.863Cynoglossus_semilaevis
ENSLBEG00000004030rbfox3b10078.049ENSCSEG00000020606RBFOX310076.965Cynoglossus_semilaevis
ENSLBEG00000004030rbfox3b9994.872ENSCVAG00000006882rbfox3b9891.643Cyprinodon_variegatus
ENSLBEG00000004030rbfox3b9982.667ENSDARG00000074310rbfox3b9682.000Danio_rerio
ENSLBEG00000004030rbfox3b10084.097ENSDARG00000010083rbfox3a10085.445Danio_rerio
ENSLBEG00000004030rbfox3b8161.564ENSDNOG00000039391RBFOX37785.106Dasypus_novemcinctus
ENSLBEG00000004030rbfox3b9559.366ENSDORG00000005352Rbfox38186.957Dipodomys_ordii
ENSLBEG00000004030rbfox3b8456.870ENSEBUG00000013559RBFOX38156.122Eptatretus_burgeri
ENSLBEG00000004030rbfox3b10063.444ENSEBUG00000002129RBFOX39969.492Eptatretus_burgeri
ENSLBEG00000004030rbfox3b9474.834ENSEASG00005005059RBFOX310081.962Equus_asinus_asinus
ENSLBEG00000004030rbfox3b9474.587ENSECAG00000023811RBFOX310081.646Equus_caballus
ENSLBEG00000004030rbfox3b8076.471ENSEEUG00000013974RBFOX37688.000Erinaceus_europaeus
ENSLBEG00000004030rbfox3b6363.776ENSELUG00000009807-5459.135Esox_lucius
ENSLBEG00000004030rbfox3b10093.931ENSELUG00000017963rbfox3b10093.931Esox_lucius
ENSLBEG00000004030rbfox3b9879.444ENSFCAG00000002555RBFOX310082.012Felis_catus
ENSLBEG00000004030rbfox3b8967.877ENSFALG00000012288RBFOX39864.070Ficedula_albicollis
ENSLBEG00000004030rbfox3b9559.605ENSFDAG00000007489RBFOX310066.667Fukomys_damarensis
ENSLBEG00000004030rbfox3b9985.256ENSFHEG00000008550rbfox3b10089.744Fundulus_heteroclitus
ENSLBEG00000004030rbfox3b10089.796ENSGMOG00000019304-10069.786Gadus_morhua
ENSLBEG00000004030rbfox3b9882.123ENSGALG00000032889RBFOX39984.034Gallus_gallus
ENSLBEG00000004030rbfox3b10093.355ENSGAFG00000005025rbfox3b10090.761Gambusia_affinis
ENSLBEG00000004030rbfox3b9584.314ENSGACG00000002138-10072.751Gasterosteus_aculeatus
ENSLBEG00000004030rbfox3b9884.367ENSGAGG00000020025RBFOX310083.387Gopherus_agassizii
ENSLBEG00000004030rbfox3b9478.746ENSGGOG00000012546RBFOX310082.484Gorilla_gorilla
ENSLBEG00000004030rbfox3b10077.603ENSHBUG00000023098-9883.235Haplochromis_burtoni
ENSLBEG00000004030rbfox3b10098.945ENSHBUG00000018099rbfox3b10098.945Haplochromis_burtoni
ENSLBEG00000004030rbfox3b9564.045ENSHGLG00000008679RBFOX310070.789Heterocephalus_glaber_female
ENSLBEG00000004030rbfox3b9560.955ENSHGLG00100014739RBFOX310067.895Heterocephalus_glaber_male
ENSLBEG00000004030rbfox3b9580.399ENSHCOG00000007444RBFOX38381.040Hippocampus_comes
ENSLBEG00000004030rbfox3b10077.888ENSHCOG00000001863RBFOX39378.878Hippocampus_comes
ENSLBEG00000004030rbfox3b10082.210ENSIPUG00000012010rbfox3a10084.097Ictalurus_punctatus
ENSLBEG00000004030rbfox3b9973.414ENSIPUG00000021966rbfox3b9885.606Ictalurus_punctatus
ENSLBEG00000004030rbfox3b9562.799ENSSTOG00000026817RBFOX310066.766Ictidomys_tridecemlineatus
ENSLBEG00000004030rbfox3b9561.143ENSJJAG00000014167Rbfox310072.267Jaculus_jaculus
ENSLBEG00000004030rbfox3b10099.178ENSKMAG00000006726rbfox3b10099.178Kryptolebias_marmoratus
ENSLBEG00000004030rbfox3b9567.879ENSLACG00000018409-10068.608Latimeria_chalumnae
ENSLBEG00000004030rbfox3b9483.333ENSLOCG00000012267rbfox3a9890.184Lepisosteus_oculatus
ENSLBEG00000004030rbfox3b8687.500ENSLAFG00000016623RBFOX310071.733Loxodonta_africana
ENSLBEG00000004030rbfox3b9565.569ENSMFAG00000002247RBFOX310072.022Macaca_fascicularis
ENSLBEG00000004030rbfox3b9475.000ENSMMUG00000023028RBFOX310082.484Macaca_mulatta
ENSLBEG00000004030rbfox3b9474.667ENSMNEG00000041147RBFOX310082.166Macaca_nemestrina
ENSLBEG00000004030rbfox3b9475.000ENSMLEG00000025686RBFOX310082.484Mandrillus_leucophaeus
ENSLBEG00000004030rbfox3b9580.471ENSMAMG00000020600-9978.223Mastacembelus_armatus
ENSLBEG00000004030rbfox3b10092.359ENSMAMG00000019810rbfox3b10091.362Mastacembelus_armatus
ENSLBEG00000004030rbfox3b10098.945ENSMZEG00005000781rbfox3b10098.945Maylandia_zebra
ENSLBEG00000004030rbfox3b9165.461ENSMZEG00005003055-6681.646Maylandia_zebra
ENSLBEG00000004030rbfox3b6481.443ENSMGAG00000005600RBFOX38380.455Meleagris_gallopavo
ENSLBEG00000004030rbfox3b9564.957ENSMAUG00000013543Rbfox310070.822Mesocricetus_auratus
ENSLBEG00000004030rbfox3b9093.333ENSMICG00000014898RBFOX310081.470Microcebus_murinus
ENSLBEG00000004030rbfox3b8586.207ENSMOCG00000015373Rbfox310071.277Microtus_ochrogaster
ENSLBEG00000004030rbfox3b10093.750ENSMMOG00000020193rbfox3b9793.514Mola_mola
ENSLBEG00000004030rbfox3b9880.223ENSMODG00000002089RBFOX39982.123Monodelphis_domestica
ENSLBEG00000004030rbfox3b10097.534ENSMALG00000020407rbfox3b10097.534Monopterus_albus
ENSLBEG00000004030rbfox3b10083.990ENSMALG00000018270-10084.777Monopterus_albus
ENSLBEG00000004030rbfox3b8586.207MGP_CAROLIEiJ_G0017487Rbfox39689.209Mus_caroli
ENSLBEG00000004030rbfox3b9575.000ENSMUSG00000025576Rbfox39689.209Mus_musculus
ENSLBEG00000004030rbfox3b8589.655MGP_PahariEiJ_G0018614Rbfox39689.928Mus_pahari
ENSLBEG00000004030rbfox3b8589.655MGP_SPRETEiJ_G0018331Rbfox39689.209Mus_spretus
ENSLBEG00000004030rbfox3b8972.559ENSMPUG00000012319RBFOX39973.947Mustela_putorius_furo
ENSLBEG00000004030rbfox3b8589.655ENSNGAG00000018006Rbfox310072.340Nannospalax_galili
ENSLBEG00000004030rbfox3b9993.569ENSNBRG00000010102rbfox3b9888.858Neolamprologus_brichardi
ENSLBEG00000004030rbfox3b10079.734ENSNBRG00000022885-9275.224Neolamprologus_brichardi
ENSLBEG00000004030rbfox3b9957.843ENSNLEG00000000153-9659.000Nomascus_leucogenys
ENSLBEG00000004030rbfox3b9185.106ENSMEUG00000004218-8385.106Notamacropus_eugenii
ENSLBEG00000004030rbfox3b6880.000ENSOPRG00000016279-7974.093Ochotona_princeps
ENSLBEG00000004030rbfox3b9476.744ENSODEG00000009433RBFOX310081.905Octodon_degus
ENSLBEG00000004030rbfox3b9995.192ENSONIG00000009549rbfox3b9891.922Oreochromis_niloticus
ENSLBEG00000004030rbfox3b9978.344ENSONIG00000007282-9583.385Oreochromis_niloticus
ENSLBEG00000004030rbfox3b6961.132ENSOCUG00000014217RBFOX37465.283Oryctolagus_cuniculus
ENSLBEG00000004030rbfox3b10098.082ENSORLG00000000905rbfox3b7998.082Oryzias_latipes
ENSLBEG00000004030rbfox3b10098.082ENSORLG00020018030rbfox3b9998.082Oryzias_latipes_hni
ENSLBEG00000004030rbfox3b10098.356ENSORLG00015009200rbfox3b9998.356Oryzias_latipes_hsok
ENSLBEG00000004030rbfox3b8592.049ENSOMEG00000014677rbfox3b8692.049Oryzias_melastigma
ENSLBEG00000004030rbfox3b9474.916ENSOGAG00000029595RBFOX39876.022Otolemur_garnettii
ENSLBEG00000004030rbfox3b8859.312ENSOARG00000002908RBFOX310057.215Ovis_aries
ENSLBEG00000004030rbfox3b7580.263ENSPPAG00000025383RBFOX39981.533Pan_paniscus
ENSLBEG00000004030rbfox3b9464.412ENSPPRG00000007819RBFOX310072.113Panthera_pardus
ENSLBEG00000004030rbfox3b9475.000ENSPTRG00000009727RBFOX310082.484Pan_troglodytes
ENSLBEG00000004030rbfox3b9475.000ENSPANG00000019837RBFOX310082.484Papio_anubis
ENSLBEG00000004030rbfox3b9587.629ENSPKIG00000010299rbfox3a10081.937Paramormyrops_kingsleyae
ENSLBEG00000004030rbfox3b10066.352ENSPKIG00000022633-9968.800Paramormyrops_kingsleyae
ENSLBEG00000004030rbfox3b8791.667ENSPMGG00000008000rbfox3b10091.950Periophthalmus_magnuspinnatus
ENSLBEG00000004030rbfox3b8586.207ENSPEMG00000010500Rbfox310071.809Peromyscus_maniculatus_bairdii
ENSLBEG00000004030rbfox3b5075.980ENSPMAG00000008689rbfox3b9977.941Petromyzon_marinus
ENSLBEG00000004030rbfox3b9871.429ENSPCIG00000005766RBFOX310073.163Phascolarctos_cinereus
ENSLBEG00000004030rbfox3b10095.918ENSPFOG00000018294rbfox3b9891.957Poecilia_formosa
ENSLBEG00000004030rbfox3b7699.123ENSPLAG00000000481rbfox3b7499.119Poecilia_latipinna
ENSLBEG00000004030rbfox3b9984.936ENSPMEG00000022997rbfox3b10089.423Poecilia_mexicana
ENSLBEG00000004030rbfox3b10099.454ENSPREG00000012886rbfox3b10098.916Poecilia_reticulata
ENSLBEG00000004030rbfox3b8969.706ENSPPYG00000008704RBFOX310070.294Pongo_abelii
ENSLBEG00000004030rbfox3b8586.207ENSPCAG00000001401RBFOX310064.820Procavia_capensis
ENSLBEG00000004030rbfox3b9962.431ENSPCOG00000012689RBFOX310071.191Propithecus_coquereli
ENSLBEG00000004030rbfox3b8586.207ENSPVAG00000015243RBFOX310063.536Pteropus_vampyrus
ENSLBEG00000004030rbfox3b10080.731ENSPNYG00000009079-9777.297Pundamilia_nyererei
ENSLBEG00000004030rbfox3b10088.119ENSPNYG00000010414rbfox3b10086.486Pundamilia_nyererei
ENSLBEG00000004030rbfox3b9974.667ENSPNAG00000018173rbfox3b9174.667Pygocentrus_nattereri
ENSLBEG00000004030rbfox3b10084.197ENSPNAG00000002889rbfox3a10086.010Pygocentrus_nattereri
ENSLBEG00000004030rbfox3b8684.375ENSRNOG00000003386Rbfox310081.646Rattus_norvegicus
ENSLBEG00000004030rbfox3b9879.722ENSRBIG00000040449RBFOX39981.616Rhinopithecus_bieti
ENSLBEG00000004030rbfox3b9475.000ENSRROG00000000766RBFOX310082.484Rhinopithecus_roxellana
ENSLBEG00000004030rbfox3b9478.397ENSSBOG00000031591RBFOX310082.166Saimiri_boliviensis_boliviensis
ENSLBEG00000004030rbfox3b9569.369ENSSHAG00000016076RBFOX310073.163Sarcophilus_harrisii
ENSLBEG00000004030rbfox3b9873.464ENSSFOG00015004716RBFOX39972.652Scleropages_formosus
ENSLBEG00000004030rbfox3b10080.163ENSSFOG00015023260rbfox3a9784.677Scleropages_formosus
ENSLBEG00000004030rbfox3b10089.458ENSSMAG00000012618rbfox3b8587.500Scophthalmus_maximus
ENSLBEG00000004030rbfox3b10082.289ENSSMAG00000019052-10082.803Scophthalmus_maximus
ENSLBEG00000004030rbfox3b10077.112ENSSDUG00000015801-9977.628Seriola_dumerili
ENSLBEG00000004030rbfox3b9985.256ENSSDUG00000023183rbfox3b10089.744Seriola_dumerili
ENSLBEG00000004030rbfox3b10099.726ENSSLDG00000000149rbfox3b10099.726Seriola_lalandi_dorsalis
ENSLBEG00000004030rbfox3b10080.381ENSSLDG00000016098-9980.863Seriola_lalandi_dorsalis
ENSLBEG00000004030rbfox3b9874.652ENSSPUG00000011733RBFOX39983.387Sphenodon_punctatus
ENSLBEG00000004030rbfox3b8572.426ENSSPAG00000004898-8578.049Stegastes_partitus
ENSLBEG00000004030rbfox3b10093.355ENSSPAG00000017571rbfox3b10090.761Stegastes_partitus
ENSLBEG00000004030rbfox3b7787.500ENSSSCG00000039498RBFOX310071.687Sus_scrofa
ENSLBEG00000004030rbfox3b10084.308ENSTRUG00000004894rbfox3b9789.685Takifugu_rubripes
ENSLBEG00000004030rbfox3b9983.815ENSTNIG00000011278rbfox3b10082.500Tetraodon_nigroviridis
ENSLBEG00000004030rbfox3b6054.545ENSTBEG00000004296-10049.194Tupaia_belangeri
ENSLBEG00000004030rbfox3b9456.358ENSTTRG00000003676RBFOX38385.106Tursiops_truncatus
ENSLBEG00000004030rbfox3b9475.000ENSUAMG00000004668RBFOX310082.484Ursus_americanus
ENSLBEG00000004030rbfox3b9880.000ENSVVUG00000017864RBFOX310082.166Vulpes_vulpes
ENSLBEG00000004030rbfox3b9962.798ENSXETG00000020236rbfox39863.144Xenopus_tropicalis
ENSLBEG00000004030rbfox3b9998.316ENSXCOG00000018262rbfox3b10098.316Xiphophorus_couchianus
ENSLBEG00000004030rbfox3b10099.472ENSXMAG00000012939rbfox3b10099.472Xiphophorus_maculatus

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