EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000004057 (Gene tree)
Gene ID: 109977563
Gene Symbol: hivep2b
Alias: zmp:0000000559
Full Name: transcription factor HIVEP2-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 13498 bases
Position: chrFKLU01000020.1:932053-945550
Accession: 109977563
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000005282	zf-C2H2	PF00096.26	1.3e-18	1	4
ENSLBEP00000005282	zf-C2H2	PF00096.26	1.3e-18	2	4
ENSLBEP00000005282	zf-C2H2	PF00096.26	1.3e-18	3	4
ENSLBEP00000005282	zf-C2H2	PF00096.26	1.3e-18	4	4
ENSLBEP00000005295	zf-C2H2	PF00096.26	9e-11	1	2
ENSLBEP00000005295	zf-C2H2	PF00096.26	9e-11	2	2
ENSLBEP00000005295	zf-met	PF12874.7	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000005555	-	8493	XM_020627306	ENSLBEP00000005282	1838 (aa)	XP_020482962	UPI0009B4480B
ENSLBET00000005568	-	2307	-	ENSLBEP00000005295	768 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000004057's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000004057's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000004057	hivep2b	98	88.415	ENSAPOG00000021244	-	96	88.415	Acanthochromis_polyacanthus
ENSLBEG00000004057	hivep2b	98	86.412	ENSAPEG00000010731	-	97	86.412	Amphiprion_percula
ENSLBEG00000004057	hivep2b	86	47.205	ENSAPLG00000015149	HIVEP2	67	54.153	Anas_platyrhynchos
ENSLBEG00000004057	hivep2b	98	82.557	ENSACLG00000002640	-	98	82.557	Astatotilapia_calliptera
ENSLBEG00000004057	hivep2b	97	78.954	ENSCSEG00000007403	-	99	78.954	Cynoglossus_semilaevis
ENSLBEG00000004057	hivep2b	97	74.570	ENSCVAG00000010128	-	97	74.570	Cyprinodon_variegatus
ENSLBEG00000004057	hivep2b	99	60.099	ENSELUG00000018533	hivep2b	100	59.803	Esox_lucius
ENSLBEG00000004057	hivep2b	80	52.492	ENSFALG00000012744	HIVEP2	67	54.153	Ficedula_albicollis
ENSLBEG00000004057	hivep2b	86	46.584	ENSGALG00000013795	HIVEP2	65	54.817	Gallus_gallus
ENSLBEG00000004057	hivep2b	98	82.384	ENSHBUG00000017037	-	98	82.384	Haplochromis_burtoni
ENSLBEG00000004057	hivep2b	98	77.979	ENSMAMG00000000216	-	99	78.544	Mastacembelus_armatus
ENSLBEG00000004057	hivep2b	98	82.423	ENSMZEG00005012545	-	98	82.423	Maylandia_zebra
ENSLBEG00000004057	hivep2b	86	46.584	ENSMGAG00000012956	HIVEP2	67	53.821	Meleagris_gallopavo
ENSLBEG00000004057	hivep2b	98	83.311	ENSMALG00000000095	-	99	83.311	Monopterus_albus
ENSLBEG00000004057	hivep2b	98	82.423	ENSNBRG00000006753	-	98	82.423	Neolamprologus_brichardi
ENSLBEG00000004057	hivep2b	86	43.750	ENSMEUG00000011068	HIVEP2	71	54.839	Notamacropus_eugenii
ENSLBEG00000004057	hivep2b	79	69.558	ENSORLG00000024933	-	87	69.268	Oryzias_latipes
ENSLBEG00000004057	hivep2b	98	67.244	ENSORLG00015022942	-	96	67.244	Oryzias_latipes_hsok
ENSLBEG00000004057	hivep2b	99	73.636	ENSOMEG00000023329	-	98	73.935	Oryzias_melastigma
ENSLBEG00000004057	hivep2b	97	61.290	ENSPMGG00000021389	hivep2b	92	63.357	Periophthalmus_magnuspinnatus
ENSLBEG00000004057	hivep2b	78	79.236	ENSPMEG00000013969	hivep2b	98	79.236	Poecilia_mexicana
ENSLBEG00000004057	hivep2b	98	74.536	ENSPREG00000017157	-	93	74.536	Poecilia_reticulata
ENSLBEG00000004057	hivep2b	98	83.974	ENSSDUG00000007295	-	99	83.974	Seriola_dumerili
ENSLBEG00000004057	hivep2b	80	53.156	ENSTGUG00000010974	HIVEP2	68	54.817	Taeniopygia_guttata
ENSLBEG00000004057	hivep2b	98	74.536	ENSXMAG00000021773	-	96	74.536	Xiphophorus_maculatus