EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000004079 (Gene tree)
Gene ID: 109987088
Gene Symbol: exd3
Alias: si:ch211-183l21.3
Full Name: exonuclease 3'-5' domain containing 3
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 44644 bases
Position: chrFKLU01000110.1:877878-922521
Accession: 109987088
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000005293	DNA_pol_A_exo1	PF01612.20	2.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000005566	-	3333	XM_020638053	ENSLBEP00000005293	886 (aa)	XP_020493709	-

Gene Model

Click here to download ENSLBEG00000004079's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000004079's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000004079	exd3	92	38.776	ENSG00000187609	EXD3	89	38.776	Homo_sapiens
ENSLBEG00000004079	exd3	92	75.303	ENSAPOG00000015520	exd3	97	75.303	Acanthochromis_polyacanthus
ENSLBEG00000004079	exd3	94	68.182	ENSACIG00000005561	exd3	89	68.182	Amphilophus_citrinellus
ENSLBEG00000004079	exd3	95	75.740	ENSAOCG00000007721	exd3	93	75.740	Amphiprion_ocellaris
ENSLBEG00000004079	exd3	95	75.919	ENSAPEG00000007019	exd3	94	75.919	Amphiprion_percula
ENSLBEG00000004079	exd3	95	76.000	ENSATEG00000019941	exd3	95	76.000	Anabas_testudineus
ENSLBEG00000004079	exd3	84	42.667	ENSAPLG00000015358	EXD3	99	42.667	Anas_platyrhynchos
ENSLBEG00000004079	exd3	92	36.386	ENSANAG00000019674	EXD3	90	36.538	Aotus_nancymaae
ENSLBEG00000004079	exd3	98	72.014	ENSACLG00000021922	exd3	98	72.014	Astatotilapia_calliptera
ENSLBEG00000004079	exd3	94	51.415	ENSAMXG00000019494	exd3	94	51.651	Astyanax_mexicanus
ENSLBEG00000004079	exd3	89	38.375	ENSBTAG00000023788	EXD3	90	38.375	Bos_taurus
ENSLBEG00000004079	exd3	93	37.102	ENSCJAG00000013170	EXD3	91	37.220	Callithrix_jacchus
ENSLBEG00000004079	exd3	89	39.021	ENSCAFG00000019444	EXD3	88	39.021	Canis_familiaris
ENSLBEG00000004079	exd3	86	38.781	ENSCAFG00020003171	EXD3	81	38.781	Canis_lupus_dingo
ENSLBEG00000004079	exd3	88	38.442	ENSCCAG00000027996	EXD3	86	38.442	Cebus_capucinus
ENSLBEG00000004079	exd3	92	38.896	ENSCSAG00000016661	EXD3	90	38.896	Chlorocebus_sabaeus
ENSLBEG00000004079	exd3	82	43.108	ENSCPBG00000011686	EXD3	88	42.801	Chrysemys_picta_bellii
ENSLBEG00000004079	exd3	82	30.533	ENSCING00000002195	-	84	30.533	Ciona_intestinalis
ENSLBEG00000004079	exd3	92	38.452	ENSCANG00000040692	EXD3	90	38.507	Colobus_angolensis_palliatus
ENSLBEG00000004079	exd3	94	69.322	ENSCSEG00000000750	exd3	98	70.113	Cynoglossus_semilaevis
ENSLBEG00000004079	exd3	96	68.150	ENSCVAG00000011560	exd3	95	68.384	Cyprinodon_variegatus
ENSLBEG00000004079	exd3	94	52.195	ENSDARG00000063140	exd3	96	52.725	Danio_rerio
ENSLBEG00000004079	exd3	90	38.937	ENSEASG00005016023	EXD3	90	38.937	Equus_asinus_asinus
ENSLBEG00000004079	exd3	92	38.509	ENSECAG00000017546	EXD3	89	38.386	Equus_caballus
ENSLBEG00000004079	exd3	69	43.510	ENSEEUG00000000405	-	88	40.041	Erinaceus_europaeus
ENSLBEG00000004079	exd3	94	59.504	ENSELUG00000007181	exd3	94	59.622	Esox_lucius
ENSLBEG00000004079	exd3	92	36.594	ENSFCAG00000003579	EXD3	91	36.594	Felis_catus
ENSLBEG00000004079	exd3	80	42.996	ENSFALG00000005132	EXD3	85	42.996	Ficedula_albicollis
ENSLBEG00000004079	exd3	96	60.656	ENSFHEG00000011352	exd3	95	60.656	Fundulus_heteroclitus
ENSLBEG00000004079	exd3	55	43.765	ENSGMOG00000013542	-	99	43.765	Gadus_morhua
ENSLBEG00000004079	exd3	86	41.869	ENSGALG00000052646	EXD3	88	42.105	Gallus_gallus
ENSLBEG00000004079	exd3	98	66.251	ENSGAFG00000007328	exd3	99	66.251	Gambusia_affinis
ENSLBEG00000004079	exd3	84	71.257	ENSGACG00000017442	exd3	100	71.257	Gasterosteus_aculeatus
ENSLBEG00000004079	exd3	82	39.510	ENSGAGG00000011888	EXD3	91	39.484	Gopherus_agassizii
ENSLBEG00000004079	exd3	75	48.352	ENSGGOG00000024724	EXD3	87	48.352	Gorilla_gorilla
ENSLBEG00000004079	exd3	98	72.127	ENSHBUG00000001405	exd3	98	72.127	Haplochromis_burtoni
ENSLBEG00000004079	exd3	95	67.340	ENSHCOG00000020087	exd3	95	67.340	Hippocampus_comes
ENSLBEG00000004079	exd3	95	51.636	ENSIPUG00000020343	exd3	95	52.042	Ictalurus_punctatus
ENSLBEG00000004079	exd3	95	72.057	ENSKMAG00000011881	exd3	94	72.057	Kryptolebias_marmoratus
ENSLBEG00000004079	exd3	94	48.588	ENSLOCG00000002330	exd3	95	49.176	Lepisosteus_oculatus
ENSLBEG00000004079	exd3	83	37.333	ENSLAFG00000001122	EXD3	96	37.333	Loxodonta_africana
ENSLBEG00000004079	exd3	92	39.146	ENSMFAG00000037569	EXD3	90	39.146	Macaca_fascicularis
ENSLBEG00000004079	exd3	92	40.940	ENSMNEG00000033487	EXD3	90	39.027	Macaca_nemestrina
ENSLBEG00000004079	exd3	92	37.738	ENSMLEG00000040548	EXD3	90	37.738	Mandrillus_leucophaeus
ENSLBEG00000004079	exd3	91	72.291	ENSMAMG00000008407	exd3	99	72.660	Mastacembelus_armatus
ENSLBEG00000004079	exd3	98	72.014	ENSMZEG00005017270	exd3	98	72.014	Maylandia_zebra
ENSLBEG00000004079	exd3	84	40.909	ENSMGAG00000001267	EXD3	99	40.909	Meleagris_gallopavo
ENSLBEG00000004079	exd3	91	70.173	ENSMMOG00000021267	exd3	94	70.173	Mola_mola
ENSLBEG00000004079	exd3	55	41.961	ENSMODG00000028091	-	91	42.126	Monodelphis_domestica
ENSLBEG00000004079	exd3	95	71.724	ENSMALG00000018523	exd3	99	74.106	Monopterus_albus
ENSLBEG00000004079	exd3	88	37.089	ENSMPUG00000015130	EXD3	86	36.940	Mustela_putorius_furo
ENSLBEG00000004079	exd3	97	67.471	ENSNBRG00000019734	exd3	97	68.506	Neolamprologus_brichardi
ENSLBEG00000004079	exd3	88	38.432	ENSNLEG00000009095	-	99	38.432	Nomascus_leucogenys
ENSLBEG00000004079	exd3	84	72.813	ENSONIG00000003880	exd3	97	72.813	Oreochromis_niloticus
ENSLBEG00000004079	exd3	84	37.763	ENSOANG00000012485	-	99	37.763	Ornithorhynchus_anatinus
ENSLBEG00000004079	exd3	95	67.539	ENSORLG00000010377	exd3	99	68.238	Oryzias_latipes
ENSLBEG00000004079	exd3	95	68.014	ENSORLG00020012287	exd3	93	68.133	Oryzias_latipes_hni
ENSLBEG00000004079	exd3	95	67.580	ENSORLG00015001156	exd3	98	67.946	Oryzias_latipes_hsok
ENSLBEG00000004079	exd3	95	68.214	ENSOMEG00000023060	exd3	99	63.909	Oryzias_melastigma
ENSLBEG00000004079	exd3	92	38.922	ENSPPAG00000042435	EXD3	89	39.042	Pan_paniscus
ENSLBEG00000004079	exd3	92	36.899	ENSPPRG00000004634	EXD3	91	36.899	Panthera_pardus
ENSLBEG00000004079	exd3	92	37.530	ENSPANG00000026338	EXD3	90	37.530	Papio_anubis
ENSLBEG00000004079	exd3	94	53.237	ENSPKIG00000021103	exd3	93	53.237	Paramormyrops_kingsleyae
ENSLBEG00000004079	exd3	90	41.054	ENSPSIG00000007745	EXD3	93	40.794	Pelodiscus_sinensis
ENSLBEG00000004079	exd3	94	65.166	ENSPMGG00000023999	exd3	94	65.640	Periophthalmus_magnuspinnatus
ENSLBEG00000004079	exd3	67	36.153	ENSPMAG00000006135	-	99	36.153	Petromyzon_marinus
ENSLBEG00000004079	exd3	96	39.474	ENSPCIG00000006180	-	95	39.655	Phascolarctos_cinereus
ENSLBEG00000004079	exd3	98	62.710	ENSPFOG00000019685	exd3	99	69.335	Poecilia_formosa
ENSLBEG00000004079	exd3	91	69.089	ENSPLAG00000022290	exd3	99	69.458	Poecilia_latipinna
ENSLBEG00000004079	exd3	98	67.195	ENSPMEG00000008007	exd3	99	69.704	Poecilia_mexicana
ENSLBEG00000004079	exd3	96	68.464	ENSPREG00000008142	exd3	99	69.544	Poecilia_reticulata
ENSLBEG00000004079	exd3	98	71.900	ENSPNYG00000012849	exd3	98	71.900	Pundamilia_nyererei
ENSLBEG00000004079	exd3	94	52.794	ENSPNAG00000016753	exd3	95	52.794	Pygocentrus_nattereri
ENSLBEG00000004079	exd3	92	38.169	ENSRBIG00000031855	EXD3	90	38.214	Rhinopithecus_bieti
ENSLBEG00000004079	exd3	92	38.169	ENSRROG00000040120	EXD3	90	38.242	Rhinopithecus_roxellana
ENSLBEG00000004079	exd3	92	37.248	ENSSBOG00000022389	EXD3	89	38.462	Saimiri_boliviensis_boliviensis
ENSLBEG00000004079	exd3	84	39.495	ENSSHAG00000001276	-	98	39.683	Sarcophilus_harrisii
ENSLBEG00000004079	exd3	94	51.981	ENSSFOG00015023063	exd3	94	49.330	Scleropages_formosus
ENSLBEG00000004079	exd3	94	77.246	ENSSMAG00000019809	exd3	93	77.246	Scophthalmus_maximus
ENSLBEG00000004079	exd3	91	79.038	ENSSDUG00000006265	exd3	99	79.038	Seriola_dumerili
ENSLBEG00000004079	exd3	88	77.308	ENSSLDG00000004671	exd3	98	75.309	Seriola_lalandi_dorsalis
ENSLBEG00000004079	exd3	94	74.190	ENSSPAG00000017972	exd3	93	74.190	Stegastes_partitus
ENSLBEG00000004079	exd3	87	36.776	ENSSSCG00000005855	EXD3	91	37.084	Sus_scrofa
ENSLBEG00000004079	exd3	84	41.600	ENSTGUG00000002494	EXD3	99	41.600	Taeniopygia_guttata
ENSLBEG00000004079	exd3	95	65.893	ENSTRUG00000010236	exd3	91	66.508	Takifugu_rubripes
ENSLBEG00000004079	exd3	86	63.399	ENSTNIG00000013212	exd3	96	63.399	Tetraodon_nigroviridis
ENSLBEG00000004079	exd3	52	43.421	ENSTTRG00000003815	-	55	44.983	Tursiops_truncatus
ENSLBEG00000004079	exd3	83	38.784	ENSUAMG00000021470	EXD3	87	38.784	Ursus_americanus
ENSLBEG00000004079	exd3	86	38.262	ENSVVUG00000029403	EXD3	82	38.262	Vulpes_vulpes
ENSLBEG00000004079	exd3	91	70.407	ENSXMAG00000001467	exd3	99	70.407	Xiphophorus_maculatus