EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000004115 (Gene tree)
Gene ID: 109999817
Gene Symbol: -
Alias: -
Full Name: myosin light chain kinase%2C smooth muscle-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 13443 bases
Position: chrFKLU01000604.1:111537-124979
Accession: 109999817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000005335	RIO1	PF01163.22	5.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000005608	-	6988	XM_020654953	ENSLBEP00000005335	834 (aa)	XP_020510609	UPI0009B2EF61

Gene Model

Click here to download ENSLBEG00000004115's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000004115's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000004115	-	99	53.864	ENSLBEG00000003526	mylk5	100	53.864

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000004115	-	92	60.401	ENSAPOG00000023231	mylk5	100	51.467	Acanthochromis_polyacanthus
ENSLBEG00000004115	-	99	72.306	ENSAPOG00000019520	-	99	72.114	Acanthochromis_polyacanthus
ENSLBEG00000004115	-	99	68.713	ENSACIG00000024477	-	99	68.713	Amphilophus_citrinellus
ENSLBEG00000004115	-	99	72.603	ENSAOCG00000024465	-	100	72.603	Amphiprion_ocellaris
ENSLBEG00000004115	-	99	51.635	ENSAOCG00000014130	mylk5	99	54.534	Amphiprion_ocellaris
ENSLBEG00000004115	-	99	51.635	ENSAPEG00000017851	mylk5	99	54.362	Amphiprion_percula
ENSLBEG00000004115	-	99	76.719	ENSAPEG00000014652	-	100	76.719	Amphiprion_percula
ENSLBEG00000004115	-	99	52.582	ENSATEG00000002426	mylk5	100	52.582	Anabas_testudineus
ENSLBEG00000004115	-	99	69.555	ENSACLG00000007583	-	99	69.555	Astatotilapia_calliptera
ENSLBEG00000004115	-	99	52.164	ENSACLG00000003301	mylk5	99	53.584	Astatotilapia_calliptera
ENSLBEG00000004115	-	79	61.538	ENSAMXG00000019493	-	91	61.538	Astyanax_mexicanus
ENSLBEG00000004115	-	79	58.258	ENSCSEG00000017281	mylk5	90	58.129	Cynoglossus_semilaevis
ENSLBEG00000004115	-	99	51.948	ENSCVAG00000022813	mylk5	99	51.948	Cyprinodon_variegatus
ENSLBEG00000004115	-	99	64.666	ENSCVAG00000022136	-	99	63.986	Cyprinodon_variegatus
ENSLBEG00000004115	-	98	54.080	ENSFHEG00000011638	-	99	54.080	Fundulus_heteroclitus
ENSLBEG00000004115	-	99	64.666	ENSFHEG00000010974	-	99	65.247	Fundulus_heteroclitus
ENSLBEG00000004115	-	94	58.174	ENSGAFG00000000269	mylk5	99	49.660	Gambusia_affinis
ENSLBEG00000004115	-	78	56.692	ENSGACG00000008527	mylk5	99	56.692	Gasterosteus_aculeatus
ENSLBEG00000004115	-	99	65.212	ENSHBUG00000016459	-	99	65.212	Haplochromis_burtoni
ENSLBEG00000004115	-	99	52.159	ENSHBUG00000002257	mylk5	100	52.159	Haplochromis_burtoni
ENSLBEG00000004115	-	78	72.881	ENSHCOG00000015710	-	85	72.881	Hippocampus_comes
ENSLBEG00000004115	-	93	51.970	ENSIPUG00000012659	mylk5	97	52.224	Ictalurus_punctatus
ENSLBEG00000004115	-	99	52.644	ENSKMAG00000019605	mylk5	99	52.644	Kryptolebias_marmoratus
ENSLBEG00000004115	-	99	65.450	ENSKMAG00000016742	-	99	65.450	Kryptolebias_marmoratus
ENSLBEG00000004115	-	99	50.930	ENSMAMG00000000610	mylk5	100	50.930	Mastacembelus_armatus
ENSLBEG00000004115	-	99	52.281	ENSMZEG00005022663	mylk5	100	52.281	Maylandia_zebra
ENSLBEG00000004115	-	99	52.494	ENSMMOG00000020584	mylk5	100	52.494	Mola_mola
ENSLBEG00000004115	-	98	51.208	ENSMALG00000004945	mylk5	99	51.208	Monopterus_albus
ENSLBEG00000004115	-	99	70.307	ENSMALG00000022416	-	95	70.307	Monopterus_albus
ENSLBEG00000004115	-	54	65.152	ENSONIG00000019875	-	100	65.152	Oreochromis_niloticus
ENSLBEG00000004115	-	91	53.374	ENSONIG00000001203	mylk5	100	65.152	Oreochromis_niloticus
ENSLBEG00000004115	-	99	67.753	ENSONIG00000016230	-	99	67.753	Oreochromis_niloticus
ENSLBEG00000004115	-	99	50.631	ENSPFOG00000013597	mylk5	99	50.631	Poecilia_formosa
ENSLBEG00000004115	-	99	50.767	ENSPLAG00000023779	mylk5	99	50.767	Poecilia_latipinna
ENSLBEG00000004115	-	99	51.037	ENSPMEG00000023897	mylk5	100	50.057	Poecilia_mexicana
ENSLBEG00000004115	-	71	60.336	ENSPREG00000009707	mylk5	93	60.336	Poecilia_reticulata
ENSLBEG00000004115	-	99	64.311	ENSPREG00000003222	-	99	64.311	Poecilia_reticulata
ENSLBEG00000004115	-	99	67.029	ENSPNYG00000019509	-	99	67.029	Pundamilia_nyererei
ENSLBEG00000004115	-	99	50.397	ENSPNYG00000010046	mylk5	100	50.511	Pundamilia_nyererei
ENSLBEG00000004115	-	78	64.516	ENSSFOG00015004885	-	91	64.516	Scleropages_formosus
ENSLBEG00000004115	-	99	74.852	ENSSMAG00000020328	-	99	74.852	Scophthalmus_maximus
ENSLBEG00000004115	-	99	51.244	ENSSMAG00000006784	mylk5	100	51.244	Scophthalmus_maximus
ENSLBEG00000004115	-	99	74.912	ENSSDUG00000020847	-	99	74.912	Seriola_dumerili
ENSLBEG00000004115	-	99	74.676	ENSSLDG00000019897	-	99	74.676	Seriola_lalandi_dorsalis
ENSLBEG00000004115	-	99	53.333	ENSSPAG00000020815	mylk5	100	53.333	Stegastes_partitus
ENSLBEG00000004115	-	99	71.341	ENSSPAG00000019068	-	99	71.341	Stegastes_partitus
ENSLBEG00000004115	-	99	48.649	ENSTRUG00000015150	mylk5	100	49.040	Takifugu_rubripes
ENSLBEG00000004115	-	71	56.291	ENSTNIG00000011699	mylk5	99	56.291	Tetraodon_nigroviridis
ENSLBEG00000004115	-	92	66.536	ENSXCOG00000005927	-	86	80.597	Xiphophorus_couchianus
ENSLBEG00000004115	-	99	50.629	ENSXMAG00000007789	mylk5	99	50.629	Xiphophorus_maculatus
ENSLBEG00000004115	-	86	64.085	ENSXMAG00000015589	-	94	64.085	Xiphophorus_maculatus