EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLBEG00000004128 (Gene tree)
Gene ID
109983100
Gene Symbol
rab5c
Alias
wu:fb98b08|wu:fi16g01
Full Name
RAB5C%2C member RAS oncogene family
Gene Type
protein_coding
Species
Labrus_bergylta
Status
putative
Strand
Plus strand
Length
10159 bases
Position
chrFKLU01000050.1:381682-391840
Accession
109983100
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLBEP00000005364MMR_HSR1PF01926.230.0001511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLBET00000005637-1032XM_020632634ENSLBEP00000005364220 (aa)XP_020488290UPI0009B43C91
Gene Model
Click here to download ENSLBEG00000004128's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000004128's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLBEG00000004128rab5c7339.752ENSLBEG00000013463rab159135.714
ENSLBEG00000004128rab5c7531.176ENSLBEG00000019137rhebl18731.176
ENSLBEG00000004128rab5c7634.286ENSLBEG00000020582rab9a8534.286
ENSLBEG00000004128rab5c5431.148ENSLBEG00000022310arl8ba5331.148
ENSLBEG00000004128rab5c7640.476ENSLBEG00000007681si:dkey-16l2.169636.816
ENSLBEG00000004128rab5c8537.811ENSLBEG00000026777rab33ba9633.333
ENSLBEG00000004128rab5c8040.000ENSLBEG00000026779rab138141.615
ENSLBEG00000004128rab5c9038.679ENSLBEG00000027691RAB177243.976
ENSLBEG00000004128rab5c7539.181ENSLBEG00000025798zgc:1015597339.181
ENSLBEG00000004128rab5c6937.342ENSLBEG00000006152-7937.342
ENSLBEG00000004128rab5c8540.860ENSLBEG00000003101rab4a7643.478
ENSLBEG00000004128rab5c8143.077ENSLBEG00000002367rab25a8046.154
ENSLBEG00000004128rab5c7448.466ENSLBEG00000015248rab11bb7548.466
ENSLBEG00000004128rab5c7438.415ENSLBEG00000001313RAB39B7738.415
ENSLBEG00000004128rab5c7935.165ENSLBEG00000011478rab9b8135.359
ENSLBEG00000004128rab5c7432.955ENSLBEG00000005018rab32b8032.955
ENSLBEG00000004128rab5c7033.117ENSLBEG00000014885rheb8333.117
ENSLBEG00000004128rab5c5935.385ENSLBEG00000027819rab34b6535.385
ENSLBEG00000004128rab5c7336.585ENSLBEG00000018180si:dkey-13a21.48036.585
ENSLBEG00000004128rab5c8939.901ENSLBEG00000005981-7245.342
ENSLBEG00000004128rab5c8043.503ENSLBEG00000027226-6944.785
ENSLBEG00000004128rab5c9140.796ENSLBEG00000005861rab18a7744.242
ENSLBEG00000004128rab5c9332.057ENSLBEG00000005128-9132.057
ENSLBEG00000004128rab5c7533.133ENSLBEG00000028450kras9032.164
ENSLBEG00000004128rab5c7149.682ENSLBEG00000016417rab11al7549.682
ENSLBEG00000004128rab5c6937.342ENSLBEG00000018812RAB298237.342
ENSLBEG00000004128rab5c9041.919ENSLBEG00000026790-9241.919
ENSLBEG00000004128rab5c7644.910ENSLBEG00000003748rab6a8044.910
ENSLBEG00000004128rab5c8641.799ENSLBEG00000019435rab148741.799
ENSLBEG00000004128rab5c9340.196ENSLBEG00000019372rab6bb8442.857
ENSLBEG00000004128rab5c7131.875ENSLBEG00000026006rab34a6031.875
ENSLBEG00000004128rab5c7942.458ENSLBEG00000001796RAB7A9939.320
ENSLBEG00000004128rab5c7630.178ENSLBEG00000000119rras28330.178
ENSLBEG00000004128rab5c7348.447ENSLBEG00000026857rab11a7647.853
ENSLBEG00000004128rab5c8944.898ENSLBEG00000027781rab1ab8047.853
ENSLBEG00000004128rab5c8936.923ENSLBEG00000001618rab35b7942.138
ENSLBEG00000004128rab5c7636.310ENSLBEG00000013756rab126936.310
ENSLBEG00000004128rab5c6633.562ENSLBEG00000027628si:cabz01085950.17233.562
ENSLBEG00000004128rab5c7942.458ENSLBEG00000017798-9939.320
ENSLBEG00000004128rab5c7039.216ENSLBEG00000026989RAB157239.216
ENSLBEG00000004128rab5c8236.946ENSLBEG00000014427rab33a7439.157
ENSLBEG00000004128rab5c8948.980ENSLBEG00000003235rab22a8653.614
ENSLBEG00000004128rab5c7436.145ENSLBEG00000002926si:dkey-34d22.57536.145
ENSLBEG00000004128rab5c8043.503ENSLBEG00000005791-7644.785
ENSLBEG00000004128rab5c8035.955ENSLBEG00000003644rabl27735.955
ENSLBEG00000004128rab5c7644.910ENSLBEG00000001146rab308244.910
ENSLBEG00000004128rab5c7437.195ENSLBEG00000022630-7737.195
ENSLBEG00000004128rab5c9340.686ENSLBEG00000026930rab6ba9840.686
ENSLBEG00000004128rab5c9882.870ENSLBEG00000002516rab5aa9582.870
ENSLBEG00000004128rab5c7545.455ENSLBEG00000019428rab18b8045.455
ENSLBEG00000004128rab5c7833.163ENSLBEG00000018063-6537.821
ENSLBEG00000004128rab5c7437.195ENSLBEG00000001193rab42a7637.195
ENSLBEG00000004128rab5c7943.678ENSLBEG00000008746RAB418243.678
ENSLBEG00000004128rab5c8943.077ENSLBEG00000021040rab1ba8147.853
ENSLBEG00000004128rab5c8141.573ENSLBEG00000020796rab2a8044.737
ENSLBEG00000004128rab5c7541.520ENSLBEG00000027539-7841.520
ENSLBEG00000004128rab5c8942.929ENSLBEG00000016446rab25b7847.239
ENSLBEG00000004128rab5c10091.403ENSLBEG00000010408-10091.403
ENSLBEG00000004128rab5c8942.365ENSLBEG00000004172-7448.447
ENSLBEG00000004128rab5c8944.615ENSLBEG00000028426RAB1A9644.615
ENSLBEG00000004128rab5c7347.826ENSLBEG00000006087rab11ba7447.826
ENSLBEG00000004128rab5c7234.177ENSLBEG00000013176rab237436.184
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLBEG00000004128rab5c9891.667ENSG00000108774RAB5C10095.968Homo_sapiens
ENSLBEG00000004128rab5c10096.364ENSAPOG00000016864rab5c10096.364Acanthochromis_polyacanthus
ENSLBEG00000004128rab5c9891.667ENSAMEG00000006003RAB5C9990.278Ailuropoda_melanoleuca
ENSLBEG00000004128rab5c10097.273ENSACIG00000010896rab5c10097.273Amphilophus_citrinellus
ENSLBEG00000004128rab5c10096.364ENSAOCG00000016614rab5c10096.364Amphiprion_ocellaris
ENSLBEG00000004128rab5c9896.279ENSAPEG00000017868-9996.279Amphiprion_percula
ENSLBEG00000004128rab5c9998.157ENSATEG00000001937rab5c9998.157Anabas_testudineus
ENSLBEG00000004128rab5c9393.659ENSANAG00000025390RAB5C10091.707Aotus_nancymaae
ENSLBEG00000004128rab5c10096.364ENSACLG00000002706rab5c10096.364Astatotilapia_calliptera
ENSLBEG00000004128rab5c9690.094ENSACLG00000008615-10088.739Astatotilapia_calliptera
ENSLBEG00000004128rab5c9593.269ENSAMXG00000037267-9993.269Astyanax_mexicanus
ENSLBEG00000004128rab5c10098.190ENSAMXG00000043717rab5c10098.190Astyanax_mexicanus
ENSLBEG00000004128rab5c9891.667ENSBTAG00000006982RAB5C9989.815Bos_taurus
ENSLBEG00000004128rab5c9875.115WBGene00004268rab-59975.115Caenorhabditis_elegans
ENSLBEG00000004128rab5c9891.667ENSCAFG00000015629RAB5C9990.278Canis_familiaris
ENSLBEG00000004128rab5c9891.667ENSCAFG00020013537RAB5C9990.278Canis_lupus_dingo
ENSLBEG00000004128rab5c9891.667ENSCHIG00000012960RAB5C9989.815Capra_hircus
ENSLBEG00000004128rab5c9892.130ENSTSYG00000030531RAB5C9990.278Carlito_syrichta
ENSLBEG00000004128rab5c9891.667ENSCCAG00000025940RAB5C9989.815Cebus_capucinus
ENSLBEG00000004128rab5c9891.667ENSCATG00000040873RAB5C9990.278Cercocebus_atys
ENSLBEG00000004128rab5c9891.667ENSCLAG00000016650RAB5C9989.815Chinchilla_lanigera
ENSLBEG00000004128rab5c8195.506ENSCHOG00000009886RAB5C10095.506Choloepus_hoffmanni
ENSLBEG00000004128rab5c10075.000ENSCING00000003340-10075.000Ciona_intestinalis
ENSLBEG00000004128rab5c9976.000ENSCSAVG00000000613-9983.951Ciona_savignyi
ENSLBEG00000004128rab5c9891.667ENSCGRG00001014226Rab5c9989.815Cricetulus_griseus_chok1gshd
ENSLBEG00000004128rab5c9891.667ENSCGRG00000007534Rab5c9989.815Cricetulus_griseus_crigri
ENSLBEG00000004128rab5c10095.909ENSCSEG00000017024rab5c10095.909Cynoglossus_semilaevis
ENSLBEG00000004128rab5c10096.818ENSCVAG00000009550rab5c10096.818Cyprinodon_variegatus
ENSLBEG00000004128rab5c9891.667ENSDNOG00000038853RAB5C9989.352Dasypus_novemcinctus
ENSLBEG00000004128rab5c9892.593ENSDORG00000006819Rab5c9990.741Dipodomys_ordii
ENSLBEG00000004128rab5c9076.768FBgn0014010Rab58480.541Drosophila_melanogaster
ENSLBEG00000004128rab5c8586.559ENSEBUG00000014794rab5c8886.559Eptatretus_burgeri
ENSLBEG00000004128rab5c9891.667ENSEASG00005009281RAB5C9990.278Equus_asinus_asinus
ENSLBEG00000004128rab5c9892.130ENSECAG00000025054RAB5C9990.278Equus_caballus
ENSLBEG00000004128rab5c9891.667ENSEEUG00000002790RAB5C9989.815Erinaceus_europaeus
ENSLBEG00000004128rab5c10090.909ENSELUG00000010439-10090.909Esox_lucius
ENSLBEG00000004128rab5c9896.759ENSELUG00000018516rab5c9996.759Esox_lucius
ENSLBEG00000004128rab5c9891.667ENSFCAG00000002148RAB5C9989.815Felis_catus
ENSLBEG00000004128rab5c9890.741ENSFDAG00000021541RAB5C9988.889Fukomys_damarensis
ENSLBEG00000004128rab5c10097.273ENSFHEG00000012117rab5c10097.273Fundulus_heteroclitus
ENSLBEG00000004128rab5c9991.324ENSFHEG00000015268-9991.324Fundulus_heteroclitus
ENSLBEG00000004128rab5c7688.095ENSGMOG00000001876-9788.095Gadus_morhua
ENSLBEG00000004128rab5c10095.909ENSGMOG00000015096rab5c10095.909Gadus_morhua
ENSLBEG00000004128rab5c10097.273ENSGAFG00000000884rab5c10097.273Gambusia_affinis
ENSLBEG00000004128rab5c9591.866ENSGAFG00000003642-9989.640Gambusia_affinis
ENSLBEG00000004128rab5c10092.727ENSGACG00000008659rab5c10092.727Gasterosteus_aculeatus
ENSLBEG00000004128rab5c9891.667ENSGGOG00000005472RAB5C9990.278Gorilla_gorilla
ENSLBEG00000004128rab5c9690.094ENSHBUG00000006823-10088.739Haplochromis_burtoni
ENSLBEG00000004128rab5c10096.364ENSHBUG00000002014rab5c10096.364Haplochromis_burtoni
ENSLBEG00000004128rab5c9890.741ENSHGLG00000012067RAB5C9988.426Heterocephalus_glaber_female
ENSLBEG00000004128rab5c9583.333ENSHCOG00000020238-10081.140Hippocampus_comes
ENSLBEG00000004128rab5c9998.174ENSHCOG00000004662rab5c9898.174Hippocampus_comes
ENSLBEG00000004128rab5c9594.737ENSIPUG00000020082rab5c10095.045Ictalurus_punctatus
ENSLBEG00000004128rab5c9891.204ENSSTOG00000006620RAB5C9989.815Ictidomys_tridecemlineatus
ENSLBEG00000004128rab5c9892.130ENSJJAG00000021181Rab5c9989.815Jaculus_jaculus
ENSLBEG00000004128rab5c10097.727ENSKMAG00000020038rab5c10097.727Kryptolebias_marmoratus
ENSLBEG00000004128rab5c9991.324ENSKMAG00000017417-9991.324Kryptolebias_marmoratus
ENSLBEG00000004128rab5c9893.981ENSLOCG00000012566rab5c10092.130Lepisosteus_oculatus
ENSLBEG00000004128rab5c9891.667ENSMFAG00000039627RAB5C9990.278Macaca_fascicularis
ENSLBEG00000004128rab5c9891.667ENSMNEG00000000355RAB5C9990.278Macaca_nemestrina
ENSLBEG00000004128rab5c9992.237ENSMAMG00000016207-9992.237Mastacembelus_armatus
ENSLBEG00000004128rab5c10097.727ENSMAMG00000022322rab5c10097.727Mastacembelus_armatus
ENSLBEG00000004128rab5c10096.364ENSMZEG00005022735rab5c10096.364Maylandia_zebra
ENSLBEG00000004128rab5c9690.094ENSMZEG00005021090-10088.739Maylandia_zebra
ENSLBEG00000004128rab5c9892.130ENSMAUG00000015005Rab5c9990.278Mesocricetus_auratus
ENSLBEG00000004128rab5c9892.130ENSMICG00000041608RAB5C9990.278Microcebus_murinus
ENSLBEG00000004128rab5c9892.130ENSMOCG00000018531-9989.815Microtus_ochrogaster
ENSLBEG00000004128rab5c10095.909ENSMMOG00000020621rab5c10095.909Mola_mola
ENSLBEG00000004128rab5c9890.698ENSMALG00000006052rab5c9790.868Monopterus_albus
ENSLBEG00000004128rab5c9989.498ENSMALG00000022348-9989.498Monopterus_albus
ENSLBEG00000004128rab5c9892.130MGP_CAROLIEiJ_G0017184Rab5c9990.278Mus_caroli
ENSLBEG00000004128rab5c9892.130ENSMUSG00000019173Rab5c9990.278Mus_musculus
ENSLBEG00000004128rab5c9892.130MGP_PahariEiJ_G0018314Rab5c9990.278Mus_pahari
ENSLBEG00000004128rab5c9892.130MGP_SPRETEiJ_G0018027Rab5c9990.278Mus_spretus
ENSLBEG00000004128rab5c9891.667ENSMPUG00000010554RAB5C9990.278Mustela_putorius_furo
ENSLBEG00000004128rab5c9891.667ENSNGAG00000010286Rab5c9989.815Nannospalax_galili
ENSLBEG00000004128rab5c10097.273ENSNBRG00000018165rab5c10097.273Neolamprologus_brichardi
ENSLBEG00000004128rab5c9690.094ENSNBRG00000016922-10088.739Neolamprologus_brichardi
ENSLBEG00000004128rab5c8188.764ENSOPRG00000008255RAB5C10088.764Ochotona_princeps
ENSLBEG00000004128rab5c9891.204ENSODEG00000017920RAB5C9989.352Octodon_degus
ENSLBEG00000004128rab5c10097.273ENSONIG00000001113rab5c10097.273Oreochromis_niloticus
ENSLBEG00000004128rab5c9996.774ENSORLG00000003882rab5c9996.774Oryzias_latipes
ENSLBEG00000004128rab5c9996.313ENSORLG00020008388rab5c9996.313Oryzias_latipes_hni
ENSLBEG00000004128rab5c9996.774ENSORLG00015021900rab5c9996.774Oryzias_latipes_hsok
ENSLBEG00000004128rab5c9996.774ENSOMEG00000023078rab5c9996.774Oryzias_melastigma
ENSLBEG00000004128rab5c9892.130ENSOGAG00000009456RAB5C9990.278Otolemur_garnettii
ENSLBEG00000004128rab5c9891.667ENSOARG00000018768RAB5C9989.815Ovis_aries
ENSLBEG00000004128rab5c9891.667ENSPPAG00000037206RAB5C9990.278Pan_paniscus
ENSLBEG00000004128rab5c9891.667ENSPPRG00000005745RAB5C9989.815Panthera_pardus
ENSLBEG00000004128rab5c9891.667ENSPTIG00000008177RAB5C9989.815Panthera_tigris_altaica
ENSLBEG00000004128rab5c9891.667ENSPTRG00000009194RAB5C9990.278Pan_troglodytes
ENSLBEG00000004128rab5c9888.889ENSPKIG00000001237-9987.500Paramormyrops_kingsleyae
ENSLBEG00000004128rab5c9888.889ENSPKIG00000020112-9988.889Paramormyrops_kingsleyae
ENSLBEG00000004128rab5c10094.091ENSPMGG00000010792rab5c9995.814Periophthalmus_magnuspinnatus
ENSLBEG00000004128rab5c9892.130ENSPEMG00000017971Rab5c9989.815Peromyscus_maniculatus_bairdii
ENSLBEG00000004128rab5c8782.292ENSPMAG00000007867rab5c8983.511Petromyzon_marinus
ENSLBEG00000004128rab5c9877.828ENSPMAG00000000008rab5c8885.938Petromyzon_marinus
ENSLBEG00000004128rab5c9977.419ENSPMAG00000001399rab5c9977.778Petromyzon_marinus
ENSLBEG00000004128rab5c9891.667ENSPCIG00000020225-9990.278Phascolarctos_cinereus
ENSLBEG00000004128rab5c9990.868ENSPLAG00000016333-10090.868Poecilia_latipinna
ENSLBEG00000004128rab5c10097.273ENSPLAG00000004790rab5c10097.273Poecilia_latipinna
ENSLBEG00000004128rab5c9692.019ENSPMEG00000012614-10090.583Poecilia_mexicana
ENSLBEG00000004128rab5c10097.273ENSPMEG00000011336rab5c10097.273Poecilia_mexicana
ENSLBEG00000004128rab5c8592.593ENSPREG00000022167-8993.989Poecilia_reticulata
ENSLBEG00000004128rab5c10097.273ENSPREG00000010146rab5c10097.273Poecilia_reticulata
ENSLBEG00000004128rab5c9891.667ENSPPYG00000008398RAB5C9990.278Pongo_abelii
ENSLBEG00000004128rab5c9890.741ENSPCAG00000016412RAB5C9988.889Procavia_capensis
ENSLBEG00000004128rab5c9891.204ENSPCOG00000026327RAB5C9989.352Propithecus_coquereli
ENSLBEG00000004128rab5c9892.130ENSPVAG00000003867RAB5C9990.278Pteropus_vampyrus
ENSLBEG00000004128rab5c9690.094ENSPNYG00000015851-10088.739Pundamilia_nyererei
ENSLBEG00000004128rab5c10096.364ENSPNYG00000010615rab5c10096.364Pundamilia_nyererei
ENSLBEG00000004128rab5c9590.909ENSPNAG00000002218-9890.909Pygocentrus_nattereri
ENSLBEG00000004128rab5c10097.738ENSPNAG00000028138rab5c10097.738Pygocentrus_nattereri
ENSLBEG00000004128rab5c9892.130ENSRNOG00000018568Rab5c9990.278Rattus_norvegicus
ENSLBEG00000004128rab5c9891.667ENSRBIG00000031376RAB5C9990.278Rhinopithecus_bieti
ENSLBEG00000004128rab5c9891.667ENSRROG00000032895RAB5C9990.278Rhinopithecus_roxellana
ENSLBEG00000004128rab5c9891.667ENSSBOG00000032552-9989.815Saimiri_boliviensis_boliviensis
ENSLBEG00000004128rab5c9892.130ENSSHAG00000005267-9990.741Sarcophilus_harrisii
ENSLBEG00000004128rab5c10087.727ENSSFOG00015009988-10087.727Scleropages_formosus
ENSLBEG00000004128rab5c10096.818ENSSMAG00000007323rab5c10096.818Scophthalmus_maximus
ENSLBEG00000004128rab5c10098.182ENSSDUG00000023008rab5c10098.182Seriola_dumerili
ENSLBEG00000004128rab5c10097.273ENSSLDG00000017771rab5c10097.273Seriola_lalandi_dorsalis
ENSLBEG00000004128rab5c9892.130ENSSPUG00000012950-9989.815Sphenodon_punctatus
ENSLBEG00000004128rab5c10098.636ENSSPAG00000006436rab5c10098.636Stegastes_partitus
ENSLBEG00000004128rab5c9891.667ENSSSCG00000032467RAB5C9989.815Sus_scrofa
ENSLBEG00000004128rab5c10095.909ENSTRUG00000015590rab5c10095.909Takifugu_rubripes
ENSLBEG00000004128rab5c9697.630ENSTNIG00000011711rab5c9597.630Tetraodon_nigroviridis
ENSLBEG00000004128rab5c9891.667ENSTBEG00000007092RAB5C9990.278Tupaia_belangeri
ENSLBEG00000004128rab5c9891.204ENSTTRG00000006673RAB5C9989.352Tursiops_truncatus
ENSLBEG00000004128rab5c9891.667ENSUAMG00000024343RAB5C9990.278Ursus_americanus
ENSLBEG00000004128rab5c9891.667ENSUMAG00000023270RAB5C9990.278Ursus_maritimus
ENSLBEG00000004128rab5c10097.273ENSXCOG00000016788rab5c10097.273Xiphophorus_couchianus
ENSLBEG00000004128rab5c9592.344ENSXCOG00000006300-9990.090Xiphophorus_couchianus
ENSLBEG00000004128rab5c9990.411ENSXMAG00000022179-10090.411Xiphophorus_maculatus
ENSLBEG00000004128rab5c10097.273ENSXMAG00000003266rab5c10097.273Xiphophorus_maculatus

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