EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000004143 (Gene tree)
Gene ID: 109999822
Gene Symbol: pus3
Alias: fj78b12|wu:fj78b12|zgc:56653
Full Name: pseudouridine synthase 3
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 5598 bases
Position: chrFKLU01000604.1:133046-138643
Accession: 109999822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000005456	PseudoU_synth_1	PF01416.20	1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000005735	-	1293	XM_020654960	ENSLBEP00000005456	430 (aa)	XP_020510616	-

Gene Model

Click here to download ENSLBEG00000004143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000004143's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000004143	pus3	91	50.455	ENSG00000110060	PUS3	90	55.670	Homo_sapiens
ENSLBEG00000004143	pus3	97	80.184	ENSAPOG00000019483	pus3	97	80.941	Acanthochromis_polyacanthus
ENSLBEG00000004143	pus3	91	49.766	ENSAMEG00000000144	PUS3	89	49.766	Ailuropoda_melanoleuca
ENSLBEG00000004143	pus3	78	91.071	ENSACIG00000024479	pus3	99	94.231	Amphilophus_citrinellus
ENSLBEG00000004143	pus3	97	76.419	ENSAOCG00000006589	pus3	94	76.510	Amphiprion_ocellaris
ENSLBEG00000004143	pus3	97	76.096	ENSAPEG00000014617	pus3	94	76.629	Amphiprion_percula
ENSLBEG00000004143	pus3	97	80.493	ENSATEG00000022731	pus3	93	80.690	Anabas_testudineus
ENSLBEG00000004143	pus3	90	51.628	ENSAPLG00000013285	PUS3	98	51.628	Anas_platyrhynchos
ENSLBEG00000004143	pus3	91	50.342	ENSACAG00000000186	PUS3	94	50.342	Anolis_carolinensis
ENSLBEG00000004143	pus3	91	51.054	ENSANAG00000035614	PUS3	89	51.054	Aotus_nancymaae
ENSLBEG00000004143	pus3	97	76.264	ENSACLG00000007356	pus3	95	76.457	Astatotilapia_calliptera
ENSLBEG00000004143	pus3	98	65.293	ENSAMXG00000019534	pus3	93	65.991	Astyanax_mexicanus
ENSLBEG00000004143	pus3	91	49.420	ENSBTAG00000014339	PUS3	89	49.420	Bos_taurus
ENSLBEG00000004143	pus3	80	33.957	WBGene00006473	tag-124	98	33.333	Caenorhabditis_elegans
ENSLBEG00000004143	pus3	91	51.522	ENSCJAG00000046645	PUS3	89	51.522	Callithrix_jacchus
ENSLBEG00000004143	pus3	91	48.284	ENSCAFG00000010534	PUS3	89	48.284	Canis_familiaris
ENSLBEG00000004143	pus3	91	48.284	ENSCAFG00020010659	PUS3	89	48.284	Canis_lupus_dingo
ENSLBEG00000004143	pus3	91	48.961	ENSCHIG00000012260	PUS3	89	48.961	Capra_hircus
ENSLBEG00000004143	pus3	91	51.264	ENSTSYG00000014744	PUS3	88	51.716	Carlito_syrichta
ENSLBEG00000004143	pus3	91	49.771	ENSCAPG00000012231	PUS3	89	49.771	Cavia_aperea
ENSLBEG00000004143	pus3	91	49.771	ENSCPOG00000032587	PUS3	89	49.771	Cavia_porcellus
ENSLBEG00000004143	pus3	91	51.522	ENSCCAG00000035999	PUS3	89	51.522	Cebus_capucinus
ENSLBEG00000004143	pus3	91	51.508	ENSCATG00000043123	PUS3	89	51.508	Cercocebus_atys
ENSLBEG00000004143	pus3	91	52.093	ENSCLAG00000014947	PUS3	89	52.093	Chinchilla_lanigera
ENSLBEG00000004143	pus3	91	50.000	ENSCSAG00000002281	PUS3	89	51.276	Chlorocebus_sabaeus
ENSLBEG00000004143	pus3	81	52.762	ENSCHOG00000008442	PUS3	96	53.297	Choloepus_hoffmanni
ENSLBEG00000004143	pus3	55	50.000	ENSCPBG00000011173	PUS3	80	53.043	Chrysemys_picta_bellii
ENSLBEG00000004143	pus3	67	32.738	ENSCING00000009062	-	65	32.738	Ciona_intestinalis
ENSLBEG00000004143	pus3	82	31.750	ENSCSAVG00000002211	-	90	32.000	Ciona_savignyi
ENSLBEG00000004143	pus3	91	51.852	ENSCANG00000038729	PUS3	89	51.389	Colobus_angolensis_palliatus
ENSLBEG00000004143	pus3	91	51.163	ENSCGRG00001019842	Pus3	89	51.163	Cricetulus_griseus_chok1gshd
ENSLBEG00000004143	pus3	91	50.698	ENSCGRG00000010155	Pus3	89	50.698	Cricetulus_griseus_crigri
ENSLBEG00000004143	pus3	97	73.441	ENSCSEG00000007948	pus3	93	73.460	Cynoglossus_semilaevis
ENSLBEG00000004143	pus3	97	75.166	ENSCVAG00000022150	pus3	94	75.566	Cyprinodon_variegatus
ENSLBEG00000004143	pus3	96	69.355	ENSDARG00000028976	pus3	93	69.321	Danio_rerio
ENSLBEG00000004143	pus3	91	50.229	ENSDNOG00000040719	PUS3	89	50.229	Dasypus_novemcinctus
ENSLBEG00000004143	pus3	91	50.227	ENSDORG00000001819	Pus3	89	50.227	Dipodomys_ordii
ENSLBEG00000004143	pus3	83	40.855	FBgn0034703	CG3045	82	40.855	Drosophila_melanogaster
ENSLBEG00000004143	pus3	91	44.755	ENSETEG00000013067	PUS3	89	44.755	Echinops_telfairi
ENSLBEG00000004143	pus3	92	50.204	ENSEBUG00000002154	pus3	68	50.204	Eptatretus_burgeri
ENSLBEG00000004143	pus3	91	50.000	ENSEASG00005023003	PUS3	89	50.000	Equus_asinus_asinus
ENSLBEG00000004143	pus3	91	50.000	ENSECAG00000007581	PUS3	89	50.000	Equus_caballus
ENSLBEG00000004143	pus3	91	49.065	ENSEEUG00000010543	PUS3	89	49.065	Erinaceus_europaeus
ENSLBEG00000004143	pus3	98	72.297	ENSELUG00000004425	pus3	95	72.854	Esox_lucius
ENSLBEG00000004143	pus3	90	49.767	ENSFCAG00000005340	PUS3	88	49.767	Felis_catus
ENSLBEG00000004143	pus3	97	50.545	ENSFALG00000005159	PUS3	91	52.194	Ficedula_albicollis
ENSLBEG00000004143	pus3	91	50.930	ENSFDAG00000020745	PUS3	89	50.930	Fukomys_damarensis
ENSLBEG00000004143	pus3	98	76.000	ENSFHEG00000010984	pus3	87	76.659	Fundulus_heteroclitus
ENSLBEG00000004143	pus3	96	66.970	ENSGMOG00000004534	pus3	98	66.898	Gadus_morhua
ENSLBEG00000004143	pus3	91	54.042	ENSGALG00000000962	PUS3	94	53.811	Gallus_gallus
ENSLBEG00000004143	pus3	98	74.017	ENSGAFG00000005615	pus3	94	75.169	Gambusia_affinis
ENSLBEG00000004143	pus3	97	78.588	ENSGACG00000002125	pus3	93	79.254	Gasterosteus_aculeatus
ENSLBEG00000004143	pus3	97	50.324	ENSGAGG00000000160	PUS3	87	52.656	Gopherus_agassizii
ENSLBEG00000004143	pus3	91	51.276	ENSGGOG00000015047	PUS3	89	51.276	Gorilla_gorilla
ENSLBEG00000004143	pus3	97	76.044	ENSHBUG00000016532	pus3	95	76.233	Haplochromis_burtoni
ENSLBEG00000004143	pus3	60	54.770	ENSHGLG00000015753	-	77	54.770	Heterocephalus_glaber_female
ENSLBEG00000004143	pus3	91	45.519	ENSHGLG00000006599	-	85	45.519	Heterocephalus_glaber_female
ENSLBEG00000004143	pus3	92	45.047	ENSHGLG00000018861	-	93	45.047	Heterocephalus_glaber_female
ENSLBEG00000004143	pus3	91	49.195	ENSHGLG00000000565	PUS3	89	50.463	Heterocephalus_glaber_female
ENSLBEG00000004143	pus3	80	44.236	ENSHGLG00100007519	-	83	45.109	Heterocephalus_glaber_male
ENSLBEG00000004143	pus3	79	46.006	ENSHGLG00100011339	-	85	46.575	Heterocephalus_glaber_male
ENSLBEG00000004143	pus3	67	50.968	ENSHGLG00100008656	-	96	50.968	Heterocephalus_glaber_male
ENSLBEG00000004143	pus3	91	46.453	ENSHGLG00100014825	-	89	46.453	Heterocephalus_glaber_male
ENSLBEG00000004143	pus3	61	49.110	ENSHGLG00100002435	-	96	49.110	Heterocephalus_glaber_male
ENSLBEG00000004143	pus3	98	73.756	ENSHCOG00000015705	pus3	95	74.533	Hippocampus_comes
ENSLBEG00000004143	pus3	99	66.739	ENSIPUG00000000105	pus3	92	68.421	Ictalurus_punctatus
ENSLBEG00000004143	pus3	91	49.770	ENSSTOG00000003721	PUS3	89	49.770	Ictidomys_tridecemlineatus
ENSLBEG00000004143	pus3	83	53.283	ENSJJAG00000011306	Pus3	89	51.276	Jaculus_jaculus
ENSLBEG00000004143	pus3	97	75.328	ENSKMAG00000016715	pus3	94	75.278	Kryptolebias_marmoratus
ENSLBEG00000004143	pus3	93	50.113	ENSLACG00000011161	PUS3	89	50.113	Latimeria_chalumnae
ENSLBEG00000004143	pus3	96	64.615	ENSLOCG00000011922	pus3	98	64.653	Lepisosteus_oculatus
ENSLBEG00000004143	pus3	91	50.234	ENSLAFG00000000535	PUS3	89	50.234	Loxodonta_africana
ENSLBEG00000004143	pus3	91	51.276	ENSMFAG00000041002	PUS3	89	51.276	Macaca_fascicularis
ENSLBEG00000004143	pus3	91	51.276	ENSMMUG00000041875	PUS3	89	51.276	Macaca_mulatta
ENSLBEG00000004143	pus3	91	51.276	ENSMNEG00000045347	PUS3	89	51.276	Macaca_nemestrina
ENSLBEG00000004143	pus3	91	51.508	ENSMLEG00000029053	PUS3	89	51.508	Mandrillus_leucophaeus
ENSLBEG00000004143	pus3	97	75.604	ENSMAMG00000016741	pus3	94	76.126	Mastacembelus_armatus
ENSLBEG00000004143	pus3	97	76.044	ENSMZEG00005015950	pus3	95	76.233	Maylandia_zebra
ENSLBEG00000004143	pus3	80	56.461	ENSMGAG00000000851	PUS3	94	56.461	Meleagris_gallopavo
ENSLBEG00000004143	pus3	91	51.049	ENSMAUG00000015873	Pus3	89	51.049	Mesocricetus_auratus
ENSLBEG00000004143	pus3	91	49.767	ENSMICG00000032941	PUS3	89	49.767	Microcebus_murinus
ENSLBEG00000004143	pus3	91	51.163	ENSMOCG00000004901	Pus3	89	51.163	Microtus_ochrogaster
ENSLBEG00000004143	pus3	97	79.634	ENSMMOG00000013909	pus3	93	80.471	Mola_mola
ENSLBEG00000004143	pus3	91	47.856	ENSMODG00000004222	PUS3	97	47.640	Monodelphis_domestica
ENSLBEG00000004143	pus3	99	80.044	ENSMALG00000022420	pus3	93	81.903	Monopterus_albus
ENSLBEG00000004143	pus3	91	49.428	MGP_CAROLIEiJ_G0031957	Pus3	97	53.698	Mus_caroli
ENSLBEG00000004143	pus3	91	49.428	ENSMUSG00000032103	Pus3	97	53.185	Mus_musculus
ENSLBEG00000004143	pus3	91	50.114	MGP_PahariEiJ_G0014822	Pus3	97	54.140	Mus_pahari
ENSLBEG00000004143	pus3	91	49.657	MGP_SPRETEiJ_G0033081	Pus3	97	53.503	Mus_spretus
ENSLBEG00000004143	pus3	91	50.000	ENSMPUG00000006568	PUS3	89	50.000	Mustela_putorius_furo
ENSLBEG00000004143	pus3	91	49.184	ENSMLUG00000030636	PUS3	89	49.184	Myotis_lucifugus
ENSLBEG00000004143	pus3	91	51.282	ENSNGAG00000013868	Pus3	89	51.282	Nannospalax_galili
ENSLBEG00000004143	pus3	98	76.471	ENSNBRG00000015864	pus3	96	77.130	Neolamprologus_brichardi
ENSLBEG00000004143	pus3	91	50.801	ENSNLEG00000007460	PUS3	89	51.852	Nomascus_leucogenys
ENSLBEG00000004143	pus3	82	51.768	ENSMEUG00000014040	PUS3	72	60.526	Notamacropus_eugenii
ENSLBEG00000004143	pus3	91	49.083	ENSOPRG00000007888	-	89	49.083	Ochotona_princeps
ENSLBEG00000004143	pus3	91	51.843	ENSODEG00000004280	PUS3	89	51.276	Octodon_degus
ENSLBEG00000004143	pus3	97	79.592	ENSONIG00000016224	pus3	96	79.861	Oreochromis_niloticus
ENSLBEG00000004143	pus3	97	48.927	ENSOANG00000000406	PUS3	89	50.465	Ornithorhynchus_anatinus
ENSLBEG00000004143	pus3	91	50.465	ENSOCUG00000004468	PUS3	84	50.465	Oryctolagus_cuniculus
ENSLBEG00000004143	pus3	98	72.767	ENSORLG00000008445	pus3	94	73.708	Oryzias_latipes
ENSLBEG00000004143	pus3	98	73.638	ENSORLG00020008847	pus3	94	74.382	Oryzias_latipes_hni
ENSLBEG00000004143	pus3	98	72.985	ENSORLG00015007438	pus3	94	73.933	Oryzias_latipes_hsok
ENSLBEG00000004143	pus3	98	75.278	ENSOMEG00000014321	pus3	94	76.322	Oryzias_melastigma
ENSLBEG00000004143	pus3	91	49.884	ENSOGAG00000008913	PUS3	89	49.884	Otolemur_garnettii
ENSLBEG00000004143	pus3	91	49.535	ENSOARG00000011870	PUS3	89	49.535	Ovis_aries
ENSLBEG00000004143	pus3	91	49.886	ENSPPAG00000025809	PUS3	89	51.508	Pan_paniscus
ENSLBEG00000004143	pus3	90	49.535	ENSPPRG00000005662	PUS3	88	49.535	Panthera_pardus
ENSLBEG00000004143	pus3	90	49.535	ENSPTIG00000001192	PUS3	88	49.535	Panthera_tigris_altaica
ENSLBEG00000004143	pus3	91	49.886	ENSPTRG00000004449	PUS3	89	51.508	Pan_troglodytes
ENSLBEG00000004143	pus3	91	51.508	ENSPANG00000013782	PUS3	89	51.508	Papio_anubis
ENSLBEG00000004143	pus3	98	63.956	ENSPKIG00000000646	pus3	95	64.480	Paramormyrops_kingsleyae
ENSLBEG00000004143	pus3	97	48.918	ENSPSIG00000013961	PUS3	87	50.580	Pelodiscus_sinensis
ENSLBEG00000004143	pus3	90	73.188	ENSPMGG00000000911	pus3	93	73.333	Periophthalmus_magnuspinnatus
ENSLBEG00000004143	pus3	91	49.541	ENSPEMG00000009602	Pus3	89	49.541	Peromyscus_maniculatus_bairdii
ENSLBEG00000004143	pus3	99	48.069	ENSPCIG00000010225	PUS3	96	49.886	Phascolarctos_cinereus
ENSLBEG00000004143	pus3	96	77.752	ENSPFOG00000009447	pus3	98	77.622	Poecilia_formosa
ENSLBEG00000004143	pus3	98	75.705	ENSPLAG00000023343	pus3	94	76.298	Poecilia_latipinna
ENSLBEG00000004143	pus3	98	75.922	ENSPMEG00000009870	pus3	94	76.524	Poecilia_mexicana
ENSLBEG00000004143	pus3	69	74.474	ENSPREG00000003179	pus3	64	74.474	Poecilia_reticulata
ENSLBEG00000004143	pus3	91	51.276	ENSPPYG00000004039	PUS3	89	51.276	Pongo_abelii
ENSLBEG00000004143	pus3	91	49.417	ENSPCAG00000000441	PUS3	89	49.417	Procavia_capensis
ENSLBEG00000004143	pus3	91	49.306	ENSPCOG00000019330	PUS3	89	49.306	Propithecus_coquereli
ENSLBEG00000004143	pus3	91	49.884	ENSPVAG00000002606	PUS3	89	49.884	Pteropus_vampyrus
ENSLBEG00000004143	pus3	97	76.703	ENSPNYG00000019615	pus3	95	76.906	Pundamilia_nyererei
ENSLBEG00000004143	pus3	98	67.249	ENSPNAG00000014541	pus3	92	68.172	Pygocentrus_nattereri
ENSLBEG00000004143	pus3	91	51.515	ENSRNOG00000012994	Pus3	89	51.515	Rattus_norvegicus
ENSLBEG00000004143	pus3	90	49.885	ENSRBIG00000044456	PUS3	88	51.174	Rhinopithecus_bieti
ENSLBEG00000004143	pus3	91	49.773	ENSRROG00000035245	PUS3	89	51.044	Rhinopithecus_roxellana
ENSLBEG00000004143	pus3	80	36.997	YFL001W	DEG1	81	36.997	Saccharomyces_cerevisiae
ENSLBEG00000004143	pus3	91	51.054	ENSSBOG00000022433	PUS3	89	51.054	Saimiri_boliviensis_boliviensis
ENSLBEG00000004143	pus3	99	47.222	ENSSHAG00000001382	PUS3	89	49.312	Sarcophilus_harrisii
ENSLBEG00000004143	pus3	97	69.954	ENSSFOG00015004850	pus3	95	70.922	Scleropages_formosus
ENSLBEG00000004143	pus3	97	79.004	ENSSMAG00000020340	pus3	95	78.936	Scophthalmus_maximus
ENSLBEG00000004143	pus3	97	78.821	ENSSDUG00000020825	pus3	94	79.642	Seriola_dumerili
ENSLBEG00000004143	pus3	97	79.694	ENSSLDG00000019932	pus3	94	79.866	Seriola_lalandi_dorsalis
ENSLBEG00000004143	pus3	67	53.571	ENSSARG00000013826	PUS3	97	53.571	Sorex_araneus
ENSLBEG00000004143	pus3	98	48.837	ENSSPUG00000001412	PUS3	90	50.222	Sphenodon_punctatus
ENSLBEG00000004143	pus3	100	78.125	ENSSPAG00000019221	pus3	95	79.765	Stegastes_partitus
ENSLBEG00000004143	pus3	91	49.070	ENSSSCG00000015222	PUS3	89	49.070	Sus_scrofa
ENSLBEG00000004143	pus3	91	52.558	ENSTGUG00000000778	-	97	52.558	Taeniopygia_guttata
ENSLBEG00000004143	pus3	96	73.826	ENSTRUG00000013050	pus3	99	73.756	Takifugu_rubripes
ENSLBEG00000004143	pus3	99	73.483	ENSTNIG00000004929	PUS3	93	74.707	Tetraodon_nigroviridis
ENSLBEG00000004143	pus3	84	71.750	ENSTNIG00000010307	pus3	97	71.750	Tetraodon_nigroviridis
ENSLBEG00000004143	pus3	91	51.628	ENSTBEG00000004382	PUS3	93	51.628	Tupaia_belangeri
ENSLBEG00000004143	pus3	91	49.537	ENSTTRG00000012167	PUS3	89	49.537	Tursiops_truncatus
ENSLBEG00000004143	pus3	91	49.299	ENSUAMG00000009297	PUS3	89	49.299	Ursus_americanus
ENSLBEG00000004143	pus3	91	49.533	ENSUMAG00000001795	PUS3	89	49.533	Ursus_maritimus
ENSLBEG00000004143	pus3	91	49.302	ENSVPAG00000001495	PUS3	89	49.302	Vicugna_pacos
ENSLBEG00000004143	pus3	91	48.284	ENSVVUG00000020152	PUS3	89	48.284	Vulpes_vulpes
ENSLBEG00000004143	pus3	90	50.122	ENSXETG00000024532	pus3	80	50.122	Xenopus_tropicalis
ENSLBEG00000004143	pus3	55	77.734	ENSXMAG00000028945	pus3	85	77.734	Xiphophorus_maculatus
ENSLBEG00000004143	pus3	70	76.250	ENSXMAG00000029934	pus3	74	76.250	Xiphophorus_maculatus
ENSLBEG00000004143	pus3	96	78.190	ENSXMAG00000028016	pus3	94	77.882	Xiphophorus_maculatus
ENSLBEG00000004143	pus3	70	76.489	ENSXMAG00000025077	pus3	74	76.489	Xiphophorus_maculatus
ENSLBEG00000004143	pus3	70	76.489	ENSXMAG00000025659	PUS3	53	77.460	Xiphophorus_maculatus
ENSLBEG00000004143	pus3	55	77.734	ENSXMAG00000025146	pus3	79	77.734	Xiphophorus_maculatus